Physeter macrocephalus (sperm whale): 102988233
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Entry
102988233 CDS
T06011
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04136
Autophagy - other
pcad04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102988233 (ATG4D)
04136 Autophagy - other
102988233 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcad01002
]
102988233 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102988233 (ATG4D)
03029 Mitochondrial biogenesis [BR:
pcad03029
]
102988233 (ATG4D)
Peptidases and inhibitors [BR:
pcad01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
102988233 (ATG4D)
Membrane trafficking [BR:
pcad04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102988233 (ATG4D)
Mitochondrial biogenesis [BR:
pcad03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102988233 (ATG4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
102988233
NCBI-ProteinID:
XP_007107322
Ensembl:
ENSPCTG00005015372
UniProt:
A0A2Y9ER07
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MNSVSPAAAQYRSGSQEDARSPEGRRPRRPRTPDPNGLGPSGASGPALASPGTGPGEPDE
VDKFKAKFLTAWNNVKYGWAVKSRTSFSKLSSVHLCGRRYRFEGEGDIQRFQRDFVSRLW
FTYRRDFPPLAGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWTWSLGAGLGPTEPSG
LACPNRYRGPAHWMPPRWAQAAPEPEQERRHRQIVSWFADHPRAPFGLHRLVELGQSSGK
KAGDWYGPSLVAHILRKAVESCSEVTRLVVYVSQDCTVYKADVARLVARPDPTAEWKSVV
ILVPVRLGGETLNPVYVPCMKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQ
PTVDVSQADFPLESFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSA
TERYPMFTLVEGHARDHSLDDLCSQPSQPTLRLPRTGRLLKAKRPSSEDFVFL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtcgccggccgcagctcagtaccggagcggcagccaggaggacgcgcgc
agccccgagggccgcaggccacggcgcccccgaaccccggaccccaacggcctgggtccc
tccggagccagcggccccgctcttgcgtcgcccgggaccggcccgggggagccggacgaa
gtggacaagtttaaagcgaagttcctgacagcctggaacaacgtcaagtacggttgggca
gtcaaaagccggaccagctttagcaagctctccagcgtccatctctgtggccgccgctac
cgcttcgagggcgagggtgacatccagcgtttccagcgggacttcgtatctcgcctatgg
ttcacataccgccgggacttcccacctctcgccgggggctgcctgacctcggactgtggc
tggggatgcatgttacggagtgggcagatgatgctagctcagggactgctgctgcacttc
ctgcccagagactggacatggtccctgggcgcgggcctgggccccactgagccatcgggg
ttggcctgtcccaaccggtaccgtgggcctgcccactggatgcctccgcgctgggcccag
gctgcccctgagccggagcaggagcgccggcaccggcagattgtatcctggttcgctgac
cacccccgggcccccttcggcctacaccggcttgtggagcttgggcagagctcgggcaag
aaggcgggtgactggtatgggccgtccctggtggcgcacatactcaggaaagctgtggag
agctgctcagaggtcacccgcctggtggtgtatgtttctcaggactgcacagtgtacaag
gcggatgtggcacgcctggtggccaggccagaccccacagctgagtggaagtccgtggtc
atcctggtgccagtgcggctgggtggcgagactctcaaccccgtgtacgtgccctgcatg
aaggagctcctgcgttcagagctgtgccttggcatcatggggggaaagccacgccactcg
ctgtacttcattggctatcaggatgacttcctcctctacctggaccctcactactgccag
cccactgtggatgtcagccaggctgacttccccctagagtccttccattgcacctcaccc
cgcaagatggcctttgccaagatggacccgagctgtactgtggggttctatgctggagac
aggaaggagtttgagacgctctgctcagagctgaccagggtcctcagctcctcctcagcc
acagagcgatacccaatgttcaccctggttgagggccatgctcgggaccacagcctggac
gacctctgctcccagccctcccagccgacactgcggctccctcgcacaggccggctcctc
aaggctaaacgcccaagctctgaggactttgtgtttttataa
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