Physeter macrocephalus (sperm whale): 102988391
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Entry
102988391 CDS
T06011
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03013
Nucleocytoplasmic transport
pcad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102988391
03015 mRNA surveillance pathway
102988391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102988391
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102988391
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102988391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102988391
NCBI-ProteinID:
XP_007102624
Ensembl:
ENSPCTG00005010769
UniProt:
A0A2Y9EIZ2
LinkDB
All DBs
Position
17:complement(43196817..43217028)
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AA seq
484 aa
AA seq
DB search
MAGAAIPFRGRAVGRFPLALAMGDLSNLHLKEEKIKPDANGAVVKTNANAEKADEEEKED
RAAQSLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRP
SKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANRYPQCLCLSPTYELA
LQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKK
IKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNII
KLKREEETLDTIKQYYVLCNSRDEKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSK
EGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKD
GNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFKKKIERLDTDDLDEIE
KIAN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggccggggctgctatcccgttccgaggtcgcgccgtagggcgctttccgctcgccctg
gctatgggcgacttgagcaacttgcatcttaaggaagagaaaatcaaaccagatgccaat
ggtgctgtggtcaagaccaatgctaatgcagagaaggcagatgaagaagagaaagaggac
agagccgcccagtccttactcaacaagctgatcagaagcaaccttgtcgataacaccaac
caagtggaagtcctgcagcgggatccaaactccccgctctactcggtgaagtccttcgag
gagcttcggctgaaaccacagcttctccagggagtttacgccatgggcttcaaccgtcca
tcgaagatacaagagaatgcattgcctttaatgcttgctgagcccccacagaacttaata
gcccagtctcagtctggtactggtaaaacagctgcctttgtgttggccatgctcagccaa
gtagaacctgcaaacagatacccccagtgtctgtgcctctccccaacttatgagctcgct
cttcaaacgggaaaagtgattgagcagatgggcaaattttaccctgaactgaagctagct
tatgctgttcgtggcaataaattggaaagaggtcagaagatcagtgagcacattgtcatt
ggcacccctgggaccgttctggactggtgctccaagctcaagttcattgaccccaagaag
atcaaggtgtttgttctggatgaggctgacgtgatgatagctactcagggccaccaagat
cagagcatccgcatccagaggatgcttcccaggaactgccagatgctgcttttctctgcc
accttcgaagactctgtctggaaatttgcccagaaggtggtcccagacccaaacatcatc
aaactgaagcgcgaggaggagaccctggacaccatcaagcagtattacgtcctgtgcaat
agcagagatgagaagttccaggccttgtgtaacatctacggggccatcaccatcgctcaa
gccatgatcttctgccatacccgcaaaacagctagttggctggcagcagagctctcaaaa
gaaggccaccaggtggctctgctgagtggtgaaatggtggtggagcagagggctgcagtg
attgagcgcttccgagagggcaaagagaaggttctggtcaccaccaacgtgtgtgcccgc
ggtatcgatgtggagcaggtgtctgtcgtcatcaactttgaccttcccgtggacaaggat
gggaacccggacaacgagacctacctgcaccggatcgggcgcaccggccgctttggcaag
aggggcctggccgtgaacatggtggacagcaagcacagcatgaacatcctgaacagaatc
caggagcacttcaagaagaaaatagaaagactggacacagatgacttggacgagattgag
aaaatagccaactga
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