Physeter macrocephalus (sperm whale): 102988424
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Entry
102988424 CDS
T06011
Symbol
BDP1
Name
(RefSeq) transcription factor TFIIIB component B'' homolog isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102988424 (BDP1)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
102988424 (BDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
102988424
NCBI-ProteinID:
XP_023975570
Ensembl:
ENSPCTG00005001034
UniProt:
A0A2Y9SGY7
LinkDB
All DBs
Position
8:72872877..72960085
Genome browser
AA seq
2409 aa
AA seq
DB search
MFRRARLSVKPNVRPGAGARGSTAPNPQREREAPRPPEPAAASVPKPAESTDVPPVDCGE
ADPREKTPKSSDEKTDGGKDVEESSKSSSTVSQRRKRVSSTFSLVKPSVSVPSEPHPLST
VNQEAPQPNPVPTKEKQPCSDRYRIYKAQKLREMLKEELRKEKKQWKNKYAVNESQRPPD
RSKMTMRDFIYYLPDNNPMTSSLEQEKKTEKSLTPVQTREQEGKSTPDGEDNEEIEEEID
DGPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVVEENDPIFERGSTTTYSSFRKNYY
SKPWSNKETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNGWRIDKAFQEK
RPFDFDFFAHLLQKVLAEEEKRKQKSVKNQTLKEKSSKSRKNVKVKKVASERVNDNPDES
VSTRISDTEGSQKDAQTVEEEQQSLTLSGQDSEQNALEQDINQKKRRRKNQDEGSEQEVN
LSGNATVQPGSSKGEKHKNKCLSLSPEMNEDESNKEQKLPCVQNTDDIVGLSSNEKAEKR
TDPALSPSSQQDAISVAAETSESSTSDLPASEGGIRAVCEVNNAERSCTEEGNVDLKDKA
LETDQTESIKPMTRGRLQRPKPNLSRAVGKKSVLSQGKTDAESKSLHTETSVEKNHMEKA
KMNTLGISGMENKEKENPEADTASNLSEKICLQEDDQLKAFRPARLMRGLLQRPKPNVGK
AAERKETVTSQEKIGASVEKNENESCIDRDTPEQIEDQACKNFDCEDITSQSEKKDTSFQ
NVQSDEPKALNECLSIQEDNKANKQVQILKTRFQKPKPNIGRRTGRREIFSKEEEVPKEV
LASEEMTAALRETARLETSPREKVPVETNTAKEMESDLKETEKKDISPREKIPEMIDVTV
EMETDLRETGREIFPREKITKVTDATEERETDLEETERREIPLQENAPEEVDTIGEVKTG
LKETGREISLREKISEMIDAAEEVETDLEETERREIPTQEKPSELKTIDDEMETDLNKIG
IDISPREKVLVGISATGEREIDFEETGKRDFSLMEKVSGKMTAIEETEADLKETGREISL
RKSRSEEISASEEKVADLEKTGKIDISLRENEPEETGTSIQTETDSLQRGSGDCSAVPSL
NIKDISSEVPSMVHVSVEEKRNSEKEISSQLSHLNISSQTSELDKIEDQRMRSPEVPEQF
SDINLSKSLPQEQKPFEVKPAPFVRSRFKRPKPNLARAASKRETIEAEKHAPGKKVEADK
KGTVVIQQNGEQTRTLPSQRDVASLMTSTEKDKSDHSQEEAVILPYVQTEKDLSPSSSCE
PIEETQSTQAQEKELVVSMGTYHINTCEQEMKESVIQTAPPVRGRLQRPSPNLRKVGQRQ
VIEKSEAKETIKEERTLQKDETKKFLTVPNSQIAMEIEVVSSKVSEGRMYENQSHVLLEN
LHVNKINVSDEKTRHEHKTYVPSPPQMIRMQFQKAKPNLGRTQGKKEDSGIEKDRADQSK
ARKPEDNLLQHGDSDTQLLQKGKAEFLTSLEISARKGSVGSKEIGLAKKDAQSEVGPSGS
VGEKTIGDNSMCSVVEEQYVSKPASSPQLLKESNYSKIAVDRRTALSSASECKIDRSERR
MRRKIKPNVPKGRGSKRIRSKTSKKEPRASKPVLVTLRASQEEDEDDAEDFESDYEEESY
HLAPEEVNKAPVFVPVGLRSPEPVSAQIEETMEELEIPMNIPDVGCIAVVEHQLSSNIDL
TTQEMKQEENLNALSVEMTTGEHSQAETGTNDGSTEAAITLLTMGGLVLQSEISTEQSDG
VCVLPDVHSNDKSHVPFCPDNTNLKIVHERQEPSSPIRSTSPTVEENKIILDEQSTKEEI
GLMEEVKENSISSRTTSEVTNNLRMRSRFAKPKPNLKKILGTSRFGAHQEVPSLFVTKGE
VEIQRETEKNASKGRELEDKNLESVTTAESKEQSKLASVHGIEETSISQEACLTGRDEDE
EGRSAEVQLSSVAPVVSSESRPHTLDLGMGLGESSVEEPLGKDSNGDSVLILHVPECSIP
EVQQENINNPQDLTVANVHQESEDEQAFILTLVEIPTNAVEEFADTTMQLMPNPLLPAPI
LVKSVNTEERGDISISFPVTSAGQDDMCLSNSGRDDSEKPPANLDLVSRKRFHCRLDESD
HVPPAKKSSLTLRDDCQKYTSEVCSKELVNVLEKTGESYKGQGIFPTSGNTHTIPEPLKE
QLEPAFQSIRSKPLDKITDTQEKNTSQLPQDEIVVSDKEKRTCAASKSEQMDSITSSSKT
PLSRPGRRPLGFLSLICSKNSLESDEPTQVHSKKRLKPLIPVSRQNLKRSNPLNTSQKKT
QESSDLPSPSVVVNSQPKNIDSSATQVSCNHPLPKGECKDVQNRLPEEEPMTVSEYFFSD
IFIEVDETE
NT seq
7230 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcagggcacgccttagcgtgaagcccaatgtcaggcctggagcaggcgccagg
ggctccaccgcccccaatccacagcgtgaacgagaggctcccaggccgccggaacctgca
gcggcctctgtcccgaagccagcggaatccacagatgtgcccccagtggattgtggggaa
gcggacccccgagaaaagactcccaagagcagtgatgaaaagactgatggtggaaaggat
gttgaagaatccagtaaatcttcctctaccgtttcacagagaagaaagcgagtatcaagt
acttttagtctggttaaacctagtgtcagtgttccttcagaacctcatcctttatctaca
gttaatcaagaagctccacagccaaaccctgttccaacaaaagagaaacagccatgctca
gacagataccgaatatataaagcccagaagctgagagaaatgttaaaagaagaattgagg
aaagagaagaagcaatggaaaaacaaatatgctgtaaatgaaagtcagaggccaccagat
cgttccaaaatgactatgagagacttcatatattacctgccagataacaatccaatgact
tcttcactggagcaagaaaagaaaactgaaaaatcattgacaccagtccagacaagagag
caagaaggtaagagtactcctgatggtgaagataatgaagaaatagaagaggagatagat
gatgggccattgctggttcctcgagtaaaagtggcagaagatggttctattattttggat
gaagaaagtttaactgtagaagttttaaggacgaaaggcccctgtgttgttgaggaaaac
gaccccatatttgagcgtggttctacaactacatactctagctttaggaaaaactattac
tctaaaccatggtcaaataaagaaacagatatgttttttttagccatcagcatggtagga
actgacttttctatgattggacagctttttcctcacagagcaaggatagaaattaagaat
aaatttaaacgtgaagagaaaacaaatggatggagaatagacaaagcattccaggaaaag
cgcccttttgacttcgatttttttgctcatttgcttcagaaagttcttgctgaagaagag
aaaagaaaacaaaaatctgttaaaaatcagactttaaaggagaaatcctctaaatcacgg
aaaaatgtaaaagtgaaaaaagttgccagtgaaagagtgaatgataatccagatgagtct
gtgagcactagaatttcagacacagaaggatctcaaaaggatgctcagacagttgaagaa
gaacagcagtctctgactttatcaggacaggattcagaacagaatgcattagaacaagat
ataaatcaaaagaaaaggagaagaaagaatcaggatgaaggtagtgaacaagaggtaaat
ctttcaggaaatgccactgttcagccaggctcttctaaaggagaaaaacacaaaaataaa
tgcctgtctttaagtcctgagatgaatgaagatgaaagcaataaggaacaaaagcttccc
tgtgtacagaacacagatgacattgtgggtctatcctctaatgaaaaggctgagaaaaga
actgaccctgctctttcaccaagtagtcaacaagatgccatatcagtagcagctgagact
tcagaatcaagcacttcagatttgcctgcatcagaaggtggaattagagcagtgtgtgag
gtgaataatgctgagcgtagttgtacagaagaaggaaatgttgacctaaaagataaagca
ctggaaactgatcaaacagaaagtattaaaccgatgacaagaggacgactccagagacct
aaacccaatttatcaagggcagttgggaagaaatcagttctttcacaagggaaaacagat
gcagagagcaagagtttacatacagaaacttcagttgaaaagaatcatatggaaaaggct
aaaatgaatacacttggtatttctggaatggagaataaagagaaagagaacccagaagct
gacactgcatctaatttgagtgaaaaaatttgtctgcaggaagatgatcaattaaaggct
ttcagacctgcacgcctaatgaggggcttattgcaaaggccaaagccaaatgtaggtaaa
gctgctgaaagaaaagaaactgttacatcacaggaaaaaattggggccagtgtagaaaag
aatgaaaatgagtcctgtatcgatagagatactcctgaacaaatagaagatcaggcatgt
aaaaattttgattgtgaagacatcacatcacaatctgaaaaaaaagatacttctttccaa
aatgtgcagtcagatgagcccaaggctcttaatgaatgtctaagtattcaagaagataat
aaagcaaataaacaagttcagattctaaagactcgatttcagaaaccaaagccaaatata
ggaagaagaactggaagaagagaaattttctcaaaggaagaagaggtaccaaaggaggtt
cttgcctctgaggagatgacagcagctttgagagaaactgcaagattggaaacctcacca
agggaaaaggtacctgtggagactaatactgctaaggaaatggagtcagatttaaaagaa
actgaaaaaaaagatatctctcccagggagaaaataccagaaatgattgatgtcactgtg
gaaatggagacagatttgagagagactggaagagagattttcccaagggagaagataaca
aaggtgactgatgccactgaggaaagagagacagatttggaagagactgaaagaagagaa
atacccctacaggaaaatgccccagaggaggtcgatactattggtgaagtgaagacaggt
ttgaaagaaactggaagagagatttccctgagggagaagatatcggagatgattgatgcc
gctgaggaagtagagacagatttagaagaaactgaaagaagagaaatacctacacaagaa
aagccctcagagctcaaaactatagatgatgaaatggagacagatttgaacaaaattgga
atagacatttccccaagggaaaaggtactagtgggcatcagtgccacaggggaaagggag
attgatttcgaagaaactggaaaaagagacttttccctgatggaaaaggtatcaggaaag
atgactgccattgaggaaacagaggcagatttgaaagaaactggaagagaaatttccttg
aggaaaagccgatcagaagagatcagtgcttctgaggaaaaggtggcagatttggaaaaa
actggaaaaatagacatttctctaagggaaaacgaaccagaggagactgggacctcaata
caaactgagacagattcattgcagaggggtagtggtgactgcagtgctgtgccttcacta
aatattaaagacattagcagtgaagtaccatccatggtgcatgtatctgtagaagaaaaa
agaaattctgaaaaggaaatatcaagtcagttgagtcatttgaacatttcttcacagact
tcggaacttgataaaatagaagaccagaggatgcgatctccagaagttccagagcagttt
tcagatattaatttaagcaaatctcttcctcaagaacagaagccatttgaagtgaaacca
gcaccttttgtgagaagtagattcaaaagaccaaaaccaaacttagcaagagcagcttca
aaaagagagactatagaagcagaaaaacatgcacctgggaagaaagtggaagctgataaa
aaagggactgttgtgatacagcagaatggggaacaaacgagaactctcccttctcaacgt
gatgtggcttccctaatgacatcaacagaaaaagacaaatcagatcacagtcaagaggag
gctgtgatattaccatatgtacagactgaaaaggacctttccccttcgagttcttgtgaa
cctatagaggagactcagtctacacaagcccaggaaaaggaattagttgtctctatgggg
acttatcatataaacacttgcgaacaagaaatgaaggaaagtgttatccaaactgctcca
ccagtaaggggccgacttcagagacccagtccaaacttaagaaaggttggacagaggcaa
gtaatagaaaaaagtgaagccaaagaaacaattaaggaagaaaggacgctacaaaaagat
gaaactaaaaaattcctgactgtgccaaattctcaaattgcaatggaaattgaagttgta
tcctccaaagtttcagaaggcagaatgtatgaaaaccagagtcacgttcttttagaaaac
cttcatgttaacaaaataaatgtttcagatgaaaagacgagacatgaacataaaacatat
gttcctagtccaccacaaatgataagaatgcaattccaaaaggctaagccaaatttggga
agaacacaaggtaagaaagaggactcaggcatagaaaaagacagagcagatcagagtaag
gcaaggaagccagaagataatttgctgcagcatggagattctgacacccagcttcttcaa
aaaggaaaagctgagtttctgacatctctggagatttcagcaagaaaaggttctgtaggt
tccaaggagattggtttggcaaaaaaagatgctcaatcagaagttggaccatcaggaagt
gttggagagaaaaccataggcgataattctatgtgttcagttgtcgaagagcagtatgtc
agtaaaccagcaagctctccacaactgttaaaagaatcaaattattctaaaattgctgtg
gatcgaagaacagctctctcttctgcctctgaatgtaagatagatcgtagtgaaaggaga
atgcgtcgaaagattaaaccaaacgtccccaaagggcgtggatcaaaacgaattcggagt
aagacctctaagaaggaacctagagcttctaagcctgtgctggtgactcttcgagcttcc
caggaagaagacgaagatgatgcggaagactttgagtctgactatgaagaagaaagctat
catcttgctccagaagaagttaacaaagctccagtgtttgtacctgttggtctcagatct
cctgaaccggtttctgctcagattgaggaaaccatggaagagcttgaaatacccatgaat
atcccagatgtaggatgcatagctgttgttgaacatcagctctcatcaaacatagatttg
actactcaggaaatgaaacaagaagaaaatttgaatgcattatcagttgaaatgaccaca
ggtgaacattcccaagctgaaacaggtaccaacgatggaagcactgaagctgccataact
ttacttacaatgggaggtctggtgttgcagtcagagatcagtacagaacagagtgatgga
gtgtgtgtacttcctgatgttcattcaaacgataaaagccatgttcctttttgcccagat
aatacaaatctcaaaattgttcatgaacgtcaggaaccttcttcacctatccgtagtaca
tctccaacagtagaagaaaacaagattatattggatgaacagagtactaaagaagaaatt
ggtttaatggaagaagtaaaggaaaactctatatcatccaggacaacttcagaagtgacc
aataatttgagaatgagaagtagatttgccaagcctaagccaaatcttaagaaaatttta
gggaccagcaggtttggtgctcatcaggaagttcccagtttgtttgtaactaaaggagaa
gtggaaattcaaagagaaactgagaaaaatgcttctaaagggagagaattagaagataaa
aaccttgaatcagttacaacagcagagagtaaggagcagagcaaattggcatctgtacac
ggtattgaagaaaccagtatttcacaagaagcatgcctaactggaagagatgaagatgaa
gaagggaggtctgcagaggttcagctgtcttcagttgctcctgttgtttcatctgagtca
aggccccacacacttgatttgggtatgggtcttggtgagagttctgtcgaagagcccctg
ggaaaggactctaacggagacagtgtgcttatacttcatgttccagagtgtagtattcca
gaagtccaacaagagaatataaacaatcctcaagacctaacagttgctaatgtacatcaa
gaaagtgaggatgaacaagcattcattttaactctggtggaaatcccaaccaatgcagta
gaagaatttgctgataccactatgcagttaatgccaaaccctttactgccagcccccata
ttggtcaaatcagtgaatacagaagaaaggggggacataagtatcagttttccagtaact
tcagctggtcaggatgacatgtgtttatctaattctggaagagatgattccgaaaagcct
cctgctaatttggatcttgtatctaggaagagatttcattgtaggcttgacgaaagtgac
catgttcctcctgccaaaaaaagttcactcactttaagagatgattgtcaaaaatatacc
tctgaggtgtgttcaaaggaattagtaaatgttttggagaaaacaggagagtcttacaag
ggacaaggtatcttccctacctcaggaaacacacatacaattccagaacctctgaaagag
caacttgaaccagcttttcagagtatcagatctaaacctcttgataaaataacagataca
caagaaaagaatacatctcagttacctcaggatgagatagtggtctctgataaggaaaaa
agaacttgtgctgcttctaagtctgaacaaatggatagcatcacatcgtcttcaaaaacc
ccactatccagacctggcagaagacccctgggatttttgtctttaatatgttcaaagaat
agtttggagtctgatgaacctactcaggttcatagcaagaaacgcctgaaacctcttata
cctgtatcaagacagaatctgaaaagatctaatccgctcaatacaagccagaaaaaaact
caagagtcctctgatcttccatctccaagtgttgttgttaatagtcaacctaaaaatatt
gatagttcagcaactcaggtttcttgtaatcatcccttaccaaaaggagaatgtaaagat
gtccaaaaccggctaccagaagaggagccaatgacagtctctgaatatttctttagtgat
atctttattgaagtggatgaaacagaataa
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integrated database retrieval system
