Physeter macrocephalus (sperm whale): 102988453
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Entry
102988453 CDS
T06011
Symbol
SKIC3
Name
(RefSeq) SKI3 subunit of superkiller complex protein isoform X2
KO
K12600
superkiller protein 3
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102988453 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102988453 (SKIC3)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
102988453 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_8
TPR_16
TPR_14
TPR_17
TPR_CcmH_CycH
TPR_12
TPR_11
ANAPC3
ARM_TT21_C
TPR_15
TPR_9
Sel1
ARM_TT21_2nd
Fis1_TPR_C
ARM_TT21_5th
TPR_6
TPR_30
TPR_20
TPR_5
PknG_TPR
DUF7017
Retrotran_gag_2
HAT_Syf1_M
Vps39_1
YceG_bac
Motif
Other DBs
NCBI-GeneID:
102988453
NCBI-ProteinID:
XP_023975500
Ensembl:
ENSPCTG00005008578
UniProt:
A0A2Y9SA08
LinkDB
All DBs
Position
8:complement(94735446..94825720)
Genome browser
AA seq
1562 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNHINAKDVLPGVYQKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHVEVARTWHKLIKTRQEEGADNQELHQLWKKLTQLLAESPEDQNNETQQ
LLLTAFENALDLSDKIPSEDHQVLYRHFIQCLSKFPHETARLKKACEGMINIYPTVQYPL
EVLCLHLIETGSLTDEGKQYCCRLVEMDSKSGPGLIGLGIKALQDKKYEDAVRNLTEGLK
ESPLCTAGWYHLAEAQVRMHKPKEAVLSCNQALKNIDNLGVSGGSLHQKNLCLHLKAEVL
IKLSDYESSEEAIRTLDQVSDANNISGLLVLKGLAYLNKGSLDEASKIMEDLLSSYPDLA
EAHALEALIHFTKKDYLQAEKCFQLALEKDAEVAEYHYQLGLTYWSMGEETRKDKTKALT
HFLKAAKLDTYMGKVFCYLGHYYRDVAGDRNRARGCYRKAFELDDTDAESGAAAVDLSVE
LEEMETALAILTTVTQKASAGAAKWAWLRRGLYYLKAGQSSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQILGKYKEAVAQYQLIIT
KKEDYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALEYFTRALQHRADVSCLWKLV
GDACTSLYAVSPSKVNVSVLGVLLGQKEGKQVLKKNELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQHLAETGSNSNDLQELLEKSLHCLKKAVRLDSNNHLYWNALGVVSCYSGI
GNYALAQHCFIKSIQSEQINTVAWTNLGVLYLANEKIEQAHEAFKMAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRDTELYQYNILQMN
AIPAAQVVLSKYTGRIQNYVPAFTMLGYLNEHLQLKKEAADAYQRAILLLQTAEDRDAYN
VTIRNYGRLLCSIGEYDKAIQAFKSTPLEELEDIIGFGLALFMKGLYKESSKAYERALST
VESEQDKAHILTALAIAEYKQGKMDVAKTLLFKCSILKEPTTESLQALCALGLAMQDATL
SKAALNELLKHCKQKDNDYQRCLLTSAIYALQGRTVAVQRQASKAVHSNPADPALWSLLS
RVVAQYTQRNAKGGAVAGNVAHILDSNHGKKALLYTAVNQLAVGSSSADGEKNTALKAIQ
KAALLSPGDPAVWAGLMAACHADDKLALVKNTQPKRMDLQLALLSAVSASNKEFFENYNQ
SLEKWSLSQAVTGLIDTRRIAEAEALCTKNLKSNPDQPAVILLLRQVQCKPLLESQKPLP
DAVLEELQKTVMSNSTSVPAWQWLAHIYQSQGMMGAAEMCYRKSLQVASQQGSWSGKLSS
LLRLALLALEVCMANISSDHWPSLVQEATTEALKLCFCPLAVLLQSLLQFKRKMGARETR
RLLERVVYQPGYPKSIVSTARWYLLRHLHAKNDYELIDVLVNNAKTHGDTRALELNQKLS
SQ
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaggaagtaaagactgctctaaagagtgctagagatgcaatcagaaacaaa
gaatacaaagaagctttgaaacattgtaagacggtgttaaaacaagagaaaaataactat
aatgcctgggtttttattggtgttgctgcagccgagctagaacaacctgatcaggcccag
ggtgcctataagaaagctgctgagctagagccagaccaattactagcttggcaggggtta
gcaagcttgtatgagaaatgtaatcacataaatgctaaggatgtcttacctggtgtttac
caaaagctcctggatctttatgaaagtgttgacaaacagaagtggtgtgatgtctgtaag
aaacttgtggatctgtattaccaagaaaagaaacacgtagaggtggcccgaacatggcac
aaattgataaagacacggcaggaagaaggtgcagacaaccaagaacttcatcagctatgg
aagaaattgactcagctgctggctgagagtcctgaggatcagaataatgagacccaacaa
ttgctcttaactgcttttgagaatgcactggacttatcagataagattcctagtgaagat
caccaggtgctttacagacatttcattcagtgtttatccaaatttcctcatgagactgct
aggttgaagaaggcttgtgaaggaatgataaacatctatcctactgtacagtatccatta
gaagtgctttgtttgcatttaattgaaacaggaagccttactgatgagggaaaacagtat
tgttgtagattagtggaaatggattcaaaaagtggtccaggtctcattggtttaggcatt
aaagcattacaagacaaaaagtacgaagatgctgttaggaacttaacagaagggttaaag
gaaagccctctctgcacagctggatggtatcatctggcagaagcccaagtcagaatgcat
aaacctaaggaagctgttctttcatgcaatcaagctctgaagaacatagataatcttggt
gtgtctggtggcagtcttcatcagaagaatctttgtcttcatttgaaagcagaggttttg
attaaactctcagattatgaatcttcagaggaagcaattcgtactcttgatcaggtttct
gatgcaaataatatctcaggacttttggttctcaaaggcttggcctatctgaacaaaggc
tcattagatgaagcttcaaagattatggaagaccttctctcttcttaccctgacctagct
gaagctcatgccctggaggctttgattcattttaccaaaaaggactatctacaagcagaa
aaatgttttcagctagctcttgagaaagatgctgaagttgctgaatatcattaccaactt
gggttaacgtattggtccatgggtgaagaaacaagaaaagataaaacaaaggctcttacc
cattttctaaaggctgccaaactggatacatacatgggcaaagttttctgctatttaggt
cattattacagggatgtagcaggagatagaaacagagcccgtggatgctacaggaaagct
tttgaattagatgacactgatgccgaatctggagctgcagcagttgacttaagtgtagag
cttgaagagatggaaactgccttagctatcctaacaacagtcactcaaaaggcaagtgct
ggagcggcaaaatgggcctggcttaggcgaggactatactatttaaaagctggtcaaagt
tctcaagcagtggctgatttacaggcagcattgagggcagacccaaaggacttcaattgt
tgggagtcattaggagaggcatatttaagcagaggtggctatacaacagccttgaaatcc
ttcacaaaagccagtgagctgaaccccgaatcgacatacagtgtgtttaaggttgcagca
atacagcaaatcctaggcaaatataaagaggcggtagctcaataccagctgatcattaca
aagaaagaagattatgtgcctgctttgaaaggtttgggtgaatgccatctcatgatggca
aaagcagcgctagtcgattatcttgatgggaaagctgtagactacatagagaaagcactg
gaatattttactcgggctctgcagcatcgagctgatgtgtcttgcctttggaagctagtt
ggggatgcttgtaccagtctgtatgctgtctcaccatctaaagtgaatgttagtgtctta
ggagtcctcctaggtcagaaagaaggaaaacaagtattaaagaaaaatgagctcctccat
cttggaggcaggtgttatggtcgtgcattaaaactgatgtctacatctaatacgtggtgt
gatcttggaattaattattatcgccaagcacaacatctagcagaaacaggcagcaactcg
aatgatcttcaggagctgttggagaaatctttgcattgtctgaaaaaggctgtgagactt
gacagtaataatcacttatactggaatgctcttggtgtagtttcatgttacagtggtatt
ggaaattatgcccttgctcagcactgtttcatcaaatcaatccagtcagaacaaattaat
actgttgcatggaccaacttgggagtgttataccttgcaaatgaaaagattgagcaagct
catgaagctttcaaaatggctcaatcccttgatccatcttatttaatgtgctggattgga
caagctctaattgcagagacagttggaagttatgacaccatggatctcttcaggcacact
acagaactcagtatgcatacggagggagcaataggttacgcgtattgggtctgtacaaca
ttgcaagataaaagcaacagagacacggagctgtaccagtacaacatcctccagatgaat
gcaattccagcagcacaagtggttttgagtaaatacacaggaagaattcagaattatgtt
ccagctttcacaatgttgggttacttaaatgaacatctacaactgaagaaggaagcagca
gatgcataccaaagggcaattttgttgttacagactgcagaagacagagatgcttataat
gttacaataagaaattatggcagattgttatgttctattggtgaatatgataaagctatc
caggcttttaagtcaacaccccttgaggagttagaagacatcataggttttggattggct
ttatttatgaagggtctgtataaagagagtagcaaagcctatgagagagccttgtctact
gttgaatcagagcaagacaaagctcatatcttgacagctctggcaatagcggagtataaa
caaggaaaaatggacgtagccaagacattgttatttaaatgctctatcttaaaagaacca
accacggaaagccttcaagccctgtgtgctctaggattggcaatgcaagatgcaacactg
tcaaaagctgcacttaatgagttactgaagcactgcaaacagaaagacaatgattatcag
aggtgccttcttacttcagcgatctatgcactgcaaggtcgcactgtggcagtgcagaga
caagcatctaaagctgttcacagtaacccagctgatcctgctctttggtctttgttgtcc
cgagtagttgctcagtatactcaacgaaatgcaaagggaggtgcggtagcaggaaatgtg
gctcatattctggattcaaatcatggaaagaaggcattactgtacactgcagtaaatcag
ttggctgtgggaagcagttccgcagatggtgagaaaaatactgcactaaaggccattcag
aaggcagctctcctttctccaggtgatcctgctgtctgggctgggctaatggcagcttgt
catgctgatgataaattggccctagtgaagaacactcagccaaagaggatggatttacag
ttggcactgttatctgctgtttctgcttcaaacaaagaattctttgaaaattacaaccaa
tctcttgaaaagtggtctctctcccaagctgtcactggtctaatagacacaagaagaata
gctgaagctgaagccctctgcacaaagaatttaaaaagtaaccctgatcagccagctgtt
atcttacttttgagacaagttcaatgtaaaccactcctagagtcacaaaaacctctccca
gatgccgtacttgaagagctgcaaaaaacagtcatgtccaactcaacctctgttccagct
tggcagtggctggcacacatatatcagtcccaaggaatgatgggtgctgcagagatgtgt
tataggaagagtctacaagtagcatcccaacagggcagctggagtgggaaactctcaagc
ctgttgagactagcactgcttgcattagaagtctgcatggctaatatttccagtgatcac
tggccatccttggttcaagaagctacaactgaggccttgaaactttgcttttgtccgctg
gctgtccttttacaatctttgttacaattcaaacgcaaaatgggagcaagagagacacgg
cgacttttagagagagtggtgtatcagcctgggtatcccaaatctattgtttcaacagca
cgttggtaccttctgagacacttacatgccaaaaatgactacgagctcattgatgtactg
gtaaacaatgccaaaactcatggagatacaagagcactggaactgaatcagaaattgtcc
tcacaataa
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integrated database retrieval system
