Physeter macrocephalus (sperm whale): 102988575
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Entry
102988575 CDS
T06011
Symbol
TAF1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102988575 (TAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcad01001
]
102988575 (TAF1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102988575 (TAF1)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102988575 (TAF1)
Enzymes [BR:
pcad01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
102988575 (TAF1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102988575 (TAF1)
Protein kinases [BR:
pcad01001
]
Serine/threonine kinases: Other
TAF1 family
102988575 (TAF1)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102988575 (TAF1)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
102988575 (TAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Opi1
Ribosomal_L44
Zn_ribbon_12
Motif
Other DBs
NCBI-GeneID:
102988575
NCBI-ProteinID:
XP_028338743
Ensembl:
ENSPCTG00005011907
UniProt:
A0A455AS56
LinkDB
All DBs
Position
21:48923485..49010986
Genome browser
AA seq
1621 aa
AA seq
DB search
MGRSRALLSPRVAAAGTDTAIMSDTDSDEDSAGGGPFSLTGFLFGNINGAGQLEGESVLD
DECKKHLAGLGALGLGSLITELTANEELIGTDGALVNDEGWIRSTEDAVDYSDINEVAED
ESRRYQQTMGTLQPLCHADYDEDDYDADCEDIDCKLMPPPPPPPGPMKKDKDQDAITVSE
DGEGIILPSIIAPSSLASEKVDFSSSSDSESEMGPQEATQAESEDGKLTLPLAGIMQHDA
TKLLPSVTELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRELIQEEQIQEVE
CSVESEVNQKSLWNYDYAPPPPPEQCLSDDEITMMAPVESKFSQSTGDTDKVTDTKPRVA
EWRYGPARLWYDMLGVPEDGSGFDYGFKLRKMELEPVMKCRMMEDFRKLEESSGTDLLAD
ENFLMVTQLHWEDDIIWDGEDVKHKGTKPQRASLAGWLPSSMTRNAMAYNVQQGFAATLD
DDKPWYSIFPIDNEELVYGRWEDNIIWDAQAMPRLLEPPVLTLDPNDENLILEIPDEKEE
ATSNSPSKESKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEYYYPKQQG
LRGTFGGNIIQHSIPAVELRQPFFPTHMGPIKLRQFHRPPLKKYSFGALSQPGPHSVQPL
LKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENGPLMMQVGMATK
IKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPE
TDFLIIRTRQGYYIRELVDIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSK
DRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAM
VSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFI
AAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLS
LKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQ
ERYKEECQRIFDLQNKVLSSTEILSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSR
EREEQERKELQRMLLAAGSAASGNNHRDDDTASVTSLNSSATGRCLKIYRTFRDEEGKEY
VRCETVRKPAVIDAYVRIRTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQE
KEKLKGPPEKKPKKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQ
EEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVG
TTVHCDYLNRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYK
IITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDE
KLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPD
YYKVIVSPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGGYFSFFSLSINISIQ
H
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggggcgaagcagggctttgctgtccccccgcgtagcggctgccggcaccgacaccgcc
atcatgtcagacacggacagcgatgaagattccgctggaggcggcccattttctttaacc
ggtttccttttcggcaacatcaatggagccgggcagctggagggggaaagcgtcttggat
gatgagtgtaagaagcacctggcaggcttgggggctttgggtctgggcagcctgatcact
gaactcacagcaaatgaagaattgattgggactgacggtgccctggtaaatgatgaagga
tggatcaggagtacagaagatgctgtggactattcagacattaatgaggtagcagaagat
gaaagccgaagataccagcaaacaatggggaccttgcagcccctttgccatgcagattat
gatgaggatgactatgatgctgattgtgaagacattgattgcaagttgatgcctcctcca
cctccacccccaggaccaatgaagaaggataaggaccaggatgctattactgtgtctgag
gatggagaaggcatcatcttgccctccatcattgccccttcctctttggcctcagagaaa
gtggacttcagtagttcctctgactcagaatctgagatgggacctcaggaagcaacacag
gcagaatctgaggatggaaagctgaccctaccattggctgggattatgcagcatgatgcc
accaagctgttgccgagtgtcacagaacttttcccagaatttcgtcctgggaaggtgtta
cgcttcctacgtctttttggaccagggaagaatgtcccatctgtttggcggagcgctcgg
agaaagaggaagaagaagcaccgtgaactaatacaggaagagcagatccaggaggtggag
tgctcagtagaatcagaagtcaaccagaaatctttgtggaactacgactacgctccacca
ccacctccagagcagtgtctctctgatgatgaaatcacaatgatggctcctgtggagtcc
aagttttcccagtcaactggagatacagataaagtgacagacaccaaaccaagagtggct
gagtggcgttatggtcctgctagactgtggtatgatatgctgggtgttcctgaagatggc
agtgggtttgactatggcttcaaactaagaaagatggaacttgaacctgtgatgaaatgt
agaatgatggaggacttcaggaaacttgaggaaagcagtggcactgatcttctggctgat
gaaaacttcctgatggtgacacagctgcattgggaggatgatatcatctgggatggggag
gatgtcaaacacaaagggacaaaaccacagcgtgcaagcttggcaggctggcttccttcc
agcatgactaggaatgccatggcttacaatgttcaacaaggttttgcagcaaccctggat
gatgacaaaccttggtactccatttttcccattgacaatgaagagctagtgtatggacgc
tgggaggacaatatcatttgggatgctcaggccatgccccggctcttggagcctcctgtt
ttgacacttgatcccaatgatgagaacctcattttggaaattccagatgaaaaggaagag
gctacttctaactccccctccaaggagagtaagaaggaatcatctctgaagaagagtcga
attctgttagggaaaacaggagtcatcaaggaggaaccacagcagaacatgtctcagcca
gaagtgaaagatccatggaatctctccaatgatgaatattactaccctaagcaacagggt
cttcgaggcacctttggaggaaatattatacagcactcaattcctgctgtggaattacgg
caacccttctttcccacccacatggggcccattaaactacggcagttccatcgcccacct
ctgaagaagtactcttttggggcactatctcagccaggtccccactcagtccagccctta
ctaaagcacatcaaaaagaaggctaagatgagagaacaagagaggcaagcttcaggtggt
ggagagatgtttttcatgcgcacacctcaggacctcacaggcaaagatggagatcttatt
cttgcagaatacagtgaggaaaatggaccattaatgatgcaggttggcatggcaaccaag
attaaaaactactataagcggaaacctggaaaagatcccggagccccagattgtaaatat
ggagaaactgtttactgccatacatctccttttctaggctcactccatcctggacaatta
ctgcaggcatttgagaacaatctttttcgtgctccaatttatcttcataagatgccagaa
actgacttccttatcattcgcacaagacaaggttactatattcgggaattagtggatatt
tttgtggttggacagcagtgccccttgtttgaagttcctgggcccaattccaaaagggcc
aatacacatattcgagactttctccaggtttttatttaccgcctgttctggaagagtaaa
gatcggccacggcggatccgaatggaagatataaaaaaagcctttccatcccattcagaa
agcagcatccggaagaggctaaagctctgcgctgacttcaaacgcacaggcatggactca
aactggtgggtgctgaagtctgattttcgtttaccaactgaggaggagatcagggctatg
gtgtctccagagcagtgctgcgcttattatagcatgatagctgcagagcagcggctgaag
gatgctggctatggtgagaagtccttttttgctccagaagaggaaaatgaggaagatttc
cagatgaagattgatgatgaggttcgcactgctccttggaataccacaagggccttcatt
gctgccatgaagggcaagtgtctcctagaggtgactggggtggcagatcccacagggtgt
ggtgaaggattctcctatgtgaagattccaaacaaaccaacacagcagaaggatgataag
gagcctcagccagtgaagaagacagtgacaggaacagatgcagacctccgtcgcctttca
ctgaaaaatgccaagcaacttctacgtaaatttggcgtgcctgaggaagagataaaaaag
ttgtcccgctgggaagtgatcgatgtagtacgcacaatgtcaacagaacaggcccgctct
ggagaggggcccatgagtaaatttgcccgtggatcaaggttttctgtggctgagcatcaa
gagcgttacaaagaggaatgtcagcgcatctttgacctgcagaacaaggttttgtcatca
actgaaatcttatcaactgacacagatagcagctcagctgaagacagtgactttgaggag
atgggaaagaacatcgagaacatgttgcagaataagaaaaccagctctcagctgtcacgt
gagcgggaggagcaggagcggaaggaactgcagcggatgctactggcagcaggctcagca
gcatcaggaaacaatcacagagatgatgacacagcttctgtgactagccttaactcttct
gccactggccgttgtctcaagatttatcgcacgtttcgcgatgaagaagggaaagaatat
gttcgctgtgagaccgtccgaaagccagctgtcattgatgcctatgtgcgtatacggacc
acaaaagatgaggaattcattcgtaaatttgccctttttgatgaacagcatcgagaagag
atgcgaaaagaacggcggaggattcaagagcaactgaggcggcttaagcgaaaccaggaa
aaggagaagcttaagggtcctcctgagaagaagcccaaaaaaatgaaggagcgtcctgac
ctaaaactgaaatgtggggcttgtggtgccattgggcacatgagaacaaacaaattctgc
cccctttattatcaaacaaatgctccaccttccaaccctgttgccatgacagaggagcag
gaggaagagttggaaaagacagtcattcataatgataatgaagaacttatcaaggttgaa
gggaccaagattgtcttagggaaacagctaattgagagtgcagatgaggttcgcagaaaa
tctctggttctcaagttccctaagcagcaacttcctcccaagaagaaacggcgagttgga
accactgttcactgtgactatttgaatagacctcataagtccattcaccggcgccggaca
gaccccatggtgacattgtcatccattttggagtctatcatcaatgacatgagagatctt
ccaaatacgtaccctttccacactccagtcaatgcaaaggttgtaaaggactactacaaa
attatcacccgaccaatggacttacaaacgctccgtgaaaatgtgcgtaaacgcctctac
ccatctcgggaagagttcagagagcatttggagctaattgtgaaaaatagtgccacctac
aatgggccgaagcactcattgacccagatctctcaatccatgctggatctctgtgatgaa
aaacttaaagagaaagaagacaaattggctcgtttagagaaagctatcaaccccttgctg
gatgatgatgaccaagtggcattttcttttattctggacaacattgtcacccagaaaatg
atggcagttccagattcttggccatttcatcacccagttaataagaagtttgttccagat
tattacaaagtgattgtcagtccaatggatttagagaccatacgtaagaatatctccaag
cacaagtatcagagtcgggagagctttctagacgatgtcaaccttattctggccaacagt
gttaaatacaatggtgggtatttctcctttttttctctttccatcaatatatccatccaa
cattag
DBGET
integrated database retrieval system
