Physeter catodon (sperm whale): 102988606
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Entry
102988606 CDS
T06011
Symbol
MITF
Name
(RefSeq) microphthalmia-associated transcription factor isoform X3
KO
K09455
microphthalmia-associated transcription factor
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04137
Mitophagy - animal
pcad04380
Osteoclast differentiation
pcad04916
Melanogenesis
pcad05200
Pathways in cancer
pcad05202
Transcriptional misregulation in cancer
pcad05218
Melanoma
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102988606 (MITF)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
102988606 (MITF)
09158 Development and regeneration
04380 Osteoclast differentiation
102988606 (MITF)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102988606 (MITF)
05202 Transcriptional misregulation in cancer
102988606 (MITF)
09162 Cancer: specific types
05218 Melanoma
102988606 (MITF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcad03000
]
102988606 (MITF)
Transcription factors [BR:
pcad03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
102988606 (MITF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
DUF726
Motif
Other DBs
NCBI-GeneID:
102988606
NCBI-ProteinID:
XP_007127132
Ensembl:
ENSPCTG00005009685
UniProt:
A0A2Y9FMV2
LinkDB
All DBs
Position
18:complement(24687221..24929276)
Genome browser
AA seq
526 aa
AA seq
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MQSESGIVPDFEVGEEFHEEPKTYYELKSQPLKSSSSEEHPGASKPPVSSSSMTSRISLR
QQLMREQMQEQERRERQQRLQAARFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQ
THLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNS
PMAMLTLNSNCEKEGFYKFEEQNRAESECPSMNTHSRASCMQMDDVIDDIISLESSYNEE
ILGLMDPALQMANTLPVSGNLIDLYGNQGLPPAGLTISNSCPANLPNIKRELSAHIFPTE
SEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDY
IRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVSR
IIKQEPALENCSQDLLQQHADLTCTTTLDLTDGTITFNNNFGAATESSQAYSVPTKMGSK
LEDILMDDTLSPVGITDPLLSSVSPGASKTSSRRSSMSMEETEHAC
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggaatcggggatcgtgccggatttcgaagtcggggaggagtttcacgaagag
cccaaaacctattacgaactcaagagtcaacccctgaagagcagcagttccgaggagcat
cctggggcctccaagcctccagtaagctcctccagtatgacatcacgcatctcgctacgc
cagcaactcatgcgcgagcagatgcaggaacaggaacgcagggagcggcagcagaggctg
caggcggcccgcttcatgcaacagagagtgcccgtgagtcagacaccagccataaacgtc
agtgtgcccaccaccctcccctctgccacccaggtgccgatggaagtccttaaggtgcag
acccacctcgaaaaccccaccaagtaccacatacagcaagcccaaaggcagcaggtaaag
cagtacctttctaccactttagcaaataaacatgccaaccaagtcctgagcttgccatgt
ccaaaccagcctggcgatcatgtcatgccaccagtgcccgggagcagcgcacccaacagc
cccatggctatgcttacacttaactccaactgtgaaaaagagggattttataagtttgaa
gaacaaaacagggcggagagcgaatgcccaagtatgaacacgcattcacgagcgtcatgc
atgcagatggatgatgtaatcgatgacatcattagcctagaatcaagttataatgaagaa
atcctgggcctgatggatcccgctttgcaaatggcaaatacgttacctgtctctggaaac
ttgattgacctttatgggaatcaaggcctgccaccagcgggcctcaccatcagcaactcc
tgcccagccaaccttcccaacataaaaagggagctctcagcgcatatttttcccacagag
tctgaagcaagagcattggccaaagagaggcaaaaaaaggacaatcacaacttaattgaa
cgaagaagaagatttaacataaatgaccgcattaaggaactaggtactttgattcccaag
tcaaatgatccagacatgcgctggaacaagggaaccattttaaaagcgtctgtggactat
atccggaagttgcaacgggaacagcaacgtgctaaagagcttgaaaacagacagaagaag
ctggagcacgccaaccggcacttgttactcagaatacaggaacttgaaatgcaggctcga
gctcatggactttcccttattccatccacgggcctctgctctccagatttggtgagtcgg
atcatcaagcaggaacccgctcttgagaactgcagccaagacctcctccagcaacacgca
gacctaacatgcacaacgaccctggatctcacagatggcaccatcaccttcaacaacaac
tttggagctgcgaccgagagcagccaagcctatagcgttcccacgaaaatgggatccaaa
ctggaagacatcctcatggacgatactctttctcctgttggcataactgatccacttctt
tcctcggtgtcccctggggcatccaaaaccagcagccgaaggagcagtatgagcatggaa
gaaaccgagcacgcttgctag
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integrated database retrieval system
