Physeter macrocephalus (sperm whale): 102988891
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Entry
102988891 CDS
T06011
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04517
IgSF CAM signaling
pcad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102988891 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102988891 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcad04812
]
102988891 (SPTBN1)
Cytoskeleton proteins [BR:
pcad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102988891 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
102988891 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
CAMSAP_CH
SCAR_helical
Zw10_N
Motif
Other DBs
NCBI-GeneID:
102988891
NCBI-ProteinID:
XP_028352459
Ensembl:
ENSPCTG00005018634
UniProt:
A0A455BUN6
LinkDB
All DBs
Position
12:70195036..70363232
Genome browser
AA seq
1452 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRIAARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIA
YIREQWAHLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVRKHKDVAEEIANYRPTIDSLHEQAGALPQEHAESPDVQGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEAGACELWIDEKEQWLDNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNISADRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
RAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQASGCFPAVVLIVLTRPP
YSQTSPWCVKGF
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactacgacaacattgagatccaacagcagtacagcgat
gtcaacaaccgctgggacgtggacgactgggacaacgagaacagctccgcgcggctcttt
gagcggtcccgcatcaaggctctggcagatgaacgtgaagccgtgcagaagaagaccttc
accaagtgggtcaactcccacctcgcccgggtgtcctgccggatcacagacctgtacact
gaccttcgggatggacggatgctcatcaagctgctggaggtcctctccggagagagactg
cctaaacccaccaagggacgaatgcgcatccactgtctggagaacgtggacaaggccctt
cagttcctgaaggagcagagagtccatcttgagaacatggggtcccacgacatcgtggat
gggaaccaccggctgaccctcggccttatctggaccatcatcctgcgcttccagatccag
gatatcagcgtggaaactgaagacaacaaagaaaagaaatctgccaaggatgcattgctg
ttgtggtgccagatgaagacagctgggtaccccaacgtcaacattcacaatttcaccact
agctggagggacggcatggccttcaatgcactgatacacaaacaccggcctgacctgata
gattttgacaagctaaagaaatccaatgcacactacaatctgcagaatgcatttaacctt
gcagagcagcacctcggccttactaaactgttggaccccgaagatatcagtgtggaccac
cccgatgagaagtccattatcacttatgtggtgacttattaccactacttctcaaagatg
aaggccttggctgttgaaggaaaacgaattggaaaggtgctcgacaatgctattgaaaca
gaaaaaatgatcgaaaagtatgaatcccttgcctctgaccttctggagtggattgaacaa
accatcattattttgaacaatcgcaaatttgccaactcgctggttggggttcaacaacag
cttcaggccttcaacacctaccgcactgtggagaaaccgcccaaatttactgagaagggg
aacttggaagtcctgcttttcactattcagagcaagatgagggccaataaccagaaggtc
tacatgccccgggaggggaagctcatctctgacattaacaaggcctgggaaagactggaa
aaagcggaacatgagcgagaactggccctgcggaacgagcttataagacaggagaaactg
gaacagctcgcccgcagatttgaccgcaaggcagctatgagggagacctggctgagcgag
aaccagcgtctggtgtcccaggacaactttggatttgaccttcccgcagtcgaggctgcc
acgaaaaagcatgaggccattgagacggacattgccgcgtacgaggagcgcgtgcaggcc
gtggtggccgtggccagggagctggaagcggagaactaccacgacatcaagcgcattgcg
gcgaggaaggacaacgtcatccggctctgggagtacctgctggagctgctcagggcccgg
cggcagcgcctcgagatgaacctggggctgcagaagatattccaggaaatgctctacatt
atggactggatggatgaaatgaaggtgctattattgtctcaagactatggcaaacacttg
ctcggcgtggaagacctgttacagaagcacgccctggttgaagcggacattggcatccag
gccgagcgggtgagaggtgtcaatgcctccgcccagaagtttgcaacagacggggaaggt
tacaagccctgcgacccccaggtgatccgagaccgcgtggcccacatggagttctgttac
caagagctttgccagctggcggccgagcgccgggcccgcctggaagagtcccgtcgcctc
tggaagttcttctgggagatggccgaggaggaaggctggatccgggagaaggagaagatc
ctgtcctccgacgactatggcaaagacctcaccagcgtcatgcggctgctcagcaagcac
cgggcgttcgaggacgagatgagcggccgcagcggccacttcgagcaggccatcaaggag
ggcgaagacatgatcgccgaggagcatttcgggtcggagaagatccgggagcggatcgcc
tacattcgcgagcagtgggcccacctggagcagctctcggccatccgcaagaagcgcctg
gaggaggcctcgctgctgcatcagttccaggcggacgccgacgacatcgacgcctggatg
ctggacatcctcaagatcgtctccagcaacgacgtgggccacgacgagtactccacccag
tccctggtcaggaagcacaaggacgtggcagaggagatcgccaactaccggcccaccatc
gactcgctgcacgagcaggccggcgccctcccccaggagcacgctgagtctcccgacgtg
cagggccgactggcgggcatcgaggagcgctacaaggaggtggccgagctgacgcggctg
cggaagcaggcgctgcaggacaccctggccctgtacaagatgttcagcgaggccggcgcc
tgcgagctctggatcgacgagaaggagcagtggctcgacaacatgcagatcccagagaag
ctggaggacctggaggtcatccagcacagattcgagagcctagagccagagatgaacaac
caggcttcccgggtggcggtggtgaaccagatcgctcggcagctgatgcacagcggccac
ccgagtgagaaggagatcaaggcccagcaggacaagctcaacacgaggtggagtcagttc
agggagctggtggaccggaagaaggacgctctcctctccgccctgagcatccagaactac
cacctcgagtgcaacgaaaccaagtcctggattcgggaaaagaccaaggtcattgaatcc
acccaggacctgggcaacgacctggcgggagtcatggccctgcagcgcaagctgaccggc
atggagcgggacctggtggccatcgaggcaaagctgagcgacctgcagaaggaggccgag
aagctggagtccgagcaccccgaccaggcccaggccatcctgtctcggctggccgagatc
agcgacgtgtgggaggagatgaagaccacgctgaagaaccgcgaggcctccttgggagag
gccagcaagctgcagcagttcctgcgggacctggatgacttccagtcctggctctccagg
acccagacggccatcgcctccgaggacatgcccaacaccctgaccgaggctgagaagctc
ctcacgcagcacgagaacatcaaaaacgagatcgacaactatgaggaggactaccagaag
atgagggacatgggcgagatggtcacccagggccagaccgacgcccagtacatgttcttg
cggcagcggctgcaggccctggacactgggtggaatgagctccacaagatgtgggagaac
aggcagaacctcctctcccagtcccacgcctaccagcagttcctgcgggacacgaagcag
gccgaagccttccttaacaaccaggagtatgttttggcccatactgaaatgcccaccacc
ttggaaggagctgaagcagctattaaaaaacaagaggacttcatgaccaccatggacgcc
aacgaggagaagatcaatgcggtcgtggagacgggccggaggctggtgagcgatgggaac
atcagtgcggaccgcatccaggagaaggtggactctatcgatgacagacataggaagaat
cgtgaggcagccagtgagcttctgatgagactgaaggacaacagggatcttcagaaattc
ctgcaagattgtcaggagctgtctctctggatcaatgaaaagatgcttacagcccaggac
atgtcttatgatgaagccagaaatctgcacagtaaatggttaaaacatcaagcctttatg
gcagaacttgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctc
atttcagaaaagccagagacggaagccgtggtgaaggagaaactcacaggtttacataaa
atgtgggaagtccttgagtctaccacacagaccaaggcccagcggctcttcgatgcaaac
agagctgaactcttcacccagagctgtgcagatctggacaaatggctgcacggcctggag
agtcagattcaatctgatgactatggcaaagacctcaccagtgtcaacatcctgctgaaa
aagcaacaggcaagtggctgtttccctgccgtggtcctgatagtcttaactcgcccaccg
tattctcagacatccccttggtgtgtgaagggattttaa
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integrated database retrieval system
