Physeter catodon (sperm whale): 102989088
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Entry
102989088 CDS
T06011
Symbol
SLCO1C1
Name
(RefSeq) solute carrier organic anion transporter family member 1C1 isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
102989088 (SLCO1C1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcad02000
]
102989088 (SLCO1C1)
Transporters [BR:
pcad02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
102989088 (SLCO1C1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
102989088
NCBI-ProteinID:
XP_007128057
UniProt:
A0A2Y9FPD9
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Position
6:68706082..68752189
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AA seq
728 aa
AA seq
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MDTSSKENIQLFSKNSMQPVGRPSFKTEYPSSEEKQPCCGELKVFLGALSFVYFAKALAE
GYLKSTITQIERRFDIPSSLVGVIDGSFEIGNLLVITFVSYFGAKLHRPKIIGTGCLIMG
VGTLLIAMPQFFMEQYRYERYSPYSNSTFSISPCFLGSNSPLPISVMEKSQSKINNECEI
DASSSMWAYVFLGNLLRGIGETPIQPLGIAYLDDFANEENAAFYIGCVQTVAIIGPIFGF
LLGSLCAKLYVDIGFVNLDHITITPKDPQWVGAWWLGYLIAGSISLLAAVPFWYLPKSLP
RPRSREDSNSSSEKSKFIMDDHTDYQTPLGEKAKIMEMARDFLPSLKSLFGNPVYFLYLC
ASTVQFNSLFGMVTYKPKYIEQQYGQSSSKANFVIGLINIPAVAFGIFSGGIVMKKFRIS
VCGAAKLYLGSSVLGYLLFLSLFALGCENSDVAGLTVSYQGTKPVSYHERALFSDCNSRC
KCSETKWEPMCGANGITYASACLAGCQTSTRSGKTTIFNNCTCVGIAASKSGNSSGMVGR
CQKDNGCPKMFLYFLVISVITSYTLSLGGIPGYILLLRCIKPQLKSFALGIYTLAVRVLA
GIPAPVYFGVLIDTSCLKWGFKRCGSRGSCRLYDSNAFRYRIKLIPTSHGYHIPGLHNAI
GTNNPHVVSLLIHVSGTNHDPWHNVHFPKYCSTFHFKEKVCFKTQKLQNQERKNNGVYKN
QEGKLYDE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggacacttcatccaaagaaaatatacagttattcagcaaaaattcaatgcaacctgtt
gggaggccttcctttaaaacagaatatccctcctcagaggagaaacaaccctgctgtggt
gaactaaaggtgttcttgggtgccctgtcttttgtttactttgccaaagcactggcagaa
ggctacctgaagagcaccatcactcagatagagagaaggtttgatatcccttcttcactg
gtgggagtgattgatggtagttttgaaattggaaatctcttagttataacatttgttagc
tactttggagccaaacttcacaggccaaaaataattggaacagggtgcctaatcatgggt
gttggaacattgctcattgcaatgcctcagttcttcatggagcagtacagatatgaaagg
tattctccctactccaactccactttcagcatctctccatgtttcctggggtcaaacagt
ccattaccaatctcagttatggaaaaatcacaatccaaaataaataatgaatgtgaaatt
gatgccagctcctccatgtgggcttacgtcttcctggggaaccttcttcgtggcattgga
gaaactcccattcagcctctaggcatcgcctaccttgatgattttgctaacgaggaaaat
gcggctttctatattgggtgtgtgcagacggttgcaattataggaccaatctttggcttc
ctgttaggctcattatgtgccaaactgtatgttgacattggctttgtaaatctagatcat
ataaccatcaccccaaaggatccacagtgggtgggtgcctggtggcttggttatctaata
gcaggaagcataagtcttctggcagctgtgcctttctggtatttaccaaagagtctacca
agacctcggagcagagaggattccaattcctcctctgagaaatctaagtttattatggat
gatcacacggactaccaaacacctcttggagaaaaagcaaaaatcatggaaatggcaaga
gattttctgccatcactgaagagtctttttggaaatccagtgtacttcttgtatctgtgt
gcaagcaccgttcagttcaattccttatttggcatggtgacttataaaccgaagtacatc
gagcaacagtatgggcagtcgtcctctaaggccaactttgttattgggctcatcaatata
cctgcagtggcctttggaatattctctggggggatagtcatgaaaaaattcagaatcagt
gtgtgtggagccgcaaagctctacttgggatcatctgtccttgggtacctcctattcctt
tccctttttgcgttgggctgtgaaaattctgatgtggcaggactaacagtctcctaccaa
ggaaccaaacctgtctcttatcatgaacgagctctcttttcagattgcaactcaagatgc
aaatgttcagagacaaaatgggaacccatgtgtggtgcaaatggaattacatatgcatcg
gcttgtcttgctggttgtcaaacctccaccaggagtggaaagactactatatttaataac
tgcacctgtgtgggaattgccgcctcaaaatcaggaaattcctcaggcatggtgggcaga
tgtcaaaaagataatggatgccccaaaatgtttctgtacttccttgtaatttcagtcatc
acatcctatactttgtctctaggcgggatacctggatacatattgcttctgaggtgcatt
aagccacaacttaagtcttttgccctgggtatctacaccttagcagtaagagttcttgca
ggaatcccagctcccgtatattttggagttttgattgatacttcatgcctcaaatgggga
tttaaaagatgtggaagtagaggatcctgcagattatatgattcaaatgcttttaggtac
cgtatcaaactcattcccacatctcacggctaccacatcccaggtttgcacaatgcaatt
ggcactaataaccctcatgtagtttcattgcttatacatgtatctgggactaaccatgat
ccttggcacaatgtccattttcctaagtactgcagtacttttcactttaaagaaaaagta
tgtttcaaaacacagaagcttcagaaccaagagagaaagaacaatggtgtctacaagaat
caggaaggaaaactgtacgacgagtga
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