Physeter macrocephalus (sperm whale): 102989275
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Entry
102989275 CDS
T06011
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcad04121
]
102989275 (RNF38)
Enzymes [BR:
pcad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102989275 (RNF38)
Ubiquitin system [BR:
pcad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102989275 (RNF38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf_RING_Vps8_fungal
zf-C3H2C3
zf-RING_16
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
102989275
NCBI-ProteinID:
XP_007127585
Ensembl:
ENSPCTG00005018119
UniProt:
A0A2Y9FR51
LinkDB
All DBs
Position
9:28331992..28465178
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AA seq
432 aa
AA seq
DB search
MRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDEN
YHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVT
TVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAF
PPLISSDPFLLHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGG
FTYPPSAHPPALPPSAPLQFLTHDPLHQEVSFGVSYPPFMPRRLTGRSRYRSQQPIPPPP
YHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADI
EQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC
RADASEVHRDSE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccatgggagatgacatcaaataggcagcccccttcagttcgaccaagccaacat
cacttctcaggggaacgatgcaacacacctgcacgcaacagaagaagtcctcctgtcagg
cgccagagaggaagaagggatcgtctgtctcgacataattccattagtcaagatgaaaat
tatcaccatctcccttatgcacagcagcaagcaatagaggaacctcgagccttccaccct
ccgaatgtatctccccgtctattacaccctgctgctcatcctccccagcagaatgcagta
atggttgacatacatgatcagctccatcagggcaccgttcctgtttcttacacagtaaca
acagtggcaccacatgggattcccctctgcacaggccagcacatccctgcttgcagtaca
caacaggtcccaggatgctctgtggttttcagtggacagcacctccctgtctgtagtgtg
cctcctccaatgcttcaagcatgttcagttcagcacttaccagtaccatacgctgcgttt
ccaccccttatttctagtgatccatttcttttacatcctcctcacctttctccccatcat
cctcctcatttgccacctccaggccagtttgtcccttttcaaacacagcagtcacgatcg
cctctgcaaaggatagaaaacgaagtggaactcttaggagaacatcttcctgtaggaggt
tttacttacccgccatcagctcatcccccagcattgcctccatcagctcctttgcagttc
ttaacgcatgatcctttgcatcaggaggtttcctttggagtatcttatcctccatttatg
cctcggaggctcacaggacgtagtagatatcgatcccagcagccaataccacctccccct
tatcatcccagcttactgccatatgtgttatcaatgcttccagtgccacctgcagtgggc
ccaactttcagttttgaattggatgtggaagatggagaagtagaaaattacgaggccctg
ttaaacctagcagagcgactgggagaggccaagcctcgaggactgactaaagcagatatt
gaacaacttccttcttacaggttcaatcctaacaaccaccagtcagaacagaccttgtgt
gtagtatgcatgtgtgattttgagtccaggcagctacttagagttttaccctgtaaccac
gagttccatgccaagtgtgtcgacaaatggcttaaggcaaatcgtacttgcccaatctgc
cgagctgatgcttcagaagtgcatcgggattcagaatga
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