Physeter macrocephalus (sperm whale): 102989312
Help
Entry
102989312 CDS
T06011
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog isoform X2
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102989312 (CTR9)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
102989312 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
TPR_9
ANAPC3
TPR_EMC2
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
102989312
NCBI-ProteinID:
XP_007115468
Ensembl:
ENSPCTG00005009276
UniProt:
A0A2Y9F5C1
LinkDB
All DBs
Position
16:65303111..65328814
Genome browser
AA seq
1178 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSD
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKE
KKRGGSGGRRSKKGGEFDEFVNDDTDDDLPISKKKKRRKGSGSEQEGEEEEGGERKKKKR
RRPPKGDEGSDDDETENGPKPKKRRLPRAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADEGHPRNSNSDSDSDEGQRRKTGASSEESESDENQNKSGSEAGSPRRPRRQ
HSDEDSDSDQPARKRRPSGSEQSDNESLQSGRSRSGGSEMDSRPASPSAESDRYSERASD
NEGSGRGSGRGSGNESEPEGSNNEASDQGSERGSDDSD
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccattgagattcccctccgggatactgacgaggtcattgaacttgac
ttcgatcagttaccggagggagatgaagttatcagtattctgaaacaggaacacacacaa
ctgcacatatggattgcattggcgctggaatactacaagcaaggaaaaacagaagagttt
gtaaagttgttggaagcagcacgtatagatggcaatttggactatagagaccatgaaaaa
gaccagatgacttgcttggatacattggcagcctactatgtacaacaggctcggaaggag
aagaataaggacaacaagaaagatcttattacacaggcaaccctattgtatacgatggca
gataaaattattatgtatgatcagaaccatttgttgggaagagcctgcttctgcctactt
gaaggtgacaaaatggatcaggctgatgcacaatttcatttcgtactcaaccagtctcca
aataatattccagcccttcttggtaaagcttgtatttcattcaacaagaaggattacaga
ggagctctcgcttactataagaaagccttgcgaactaacccaggatgtccagcggaagtt
cgtttaggaatgggccattgctttgtgaaacttaacaaattggagaaggctcgtctggca
ttcagcagagccctggaactcaattccaaatgtgtgggagcattggtgggactggctgtt
ctagaactcaacaataaagaggctgattccatcaaaaatggtgtccaacttctttccaga
gcctatactattgatcctagcaaccctatggtattgaaccacttggcaaatcactttttc
ttcaaaaaggattacagtaaagtccagcacttggctctccatgcattccataatacagaa
gtggaggccatgcaagcagaaagttgctatcagttggctagatcattccacgtccaggaa
gattatgaccaagccttccagtactactatcaagccacacagtttgcctcatcctctttt
gtgctgcctttttttggtttgggacaaatgtacatttatcgaggtgacaaagagaatgca
tctcagtgctttgagaaagttttgaaagcttatcctaataattatgaaactatgaaaatt
cttggctctctatatgccgcctcagaagaccaagaaaaacgagatatcgccaagggccat
ttgaagaaggtcacagaacagtatcctgatgacgttgaagcttggattgagttggcacaa
atcttagaacagaccgatatacagggtgccctgtcagcctacggaacagcgacacggatc
cttcaggagaaagtgcaggccgatgtccccccagagattctgaataacgtgggtgccctc
catttcaggcttggaaatctgggagaggcaaagaaatactttttggcatcactggatcgt
gcaaaggcagaagctgagcatgatgaacattattacaatgccatttctgttacaacatca
tacaatttagccaggctgtatgaggcgatgtgtgaattccatgaagcagaaaaactgtat
aaaaacatcttacgggaacatcctaattatgttgactgctatctgcgcctaggagccatg
gctagagataaaggaaatttttatgaggcttcagattggtttaaggaagctcttcagatt
aatcaggaccatccagatgcttggtctttgattggtaatcttcatttggcaaaacaagaa
tggggtccaggccagaagaaattcgagaggatattaaaacaaccagctactcagagtgac
acttattctatgctggcccttggcaacgtctggctccaaacgttgcatcagcccacccga
gacagagaaaaggaaaagcgtcatcaagatcgtgctctggccatctacaaacaagtactc
agaaatgatgcaaagaacctgtatgctgctaatggcataggagctgttttggcccacaaa
ggatatttccgtgaagctcgtgatgtatttgcccaagtaagagaagcaacggcagatatc
agtgatgtgtggttgaacctagcacacatctacgtggaacaaaagcaatatatcagcgcc
gttcagatgtatgaaaactgcctcagaaagttctataagcaccagaacactgaagttgtg
ctctatttggcccgggccctcttcaagtgtggcaagttacaggaatgcaaacagactctg
ctgaaggctaggcacgtggcacccagtgatacagttcttatgtttaatgtggccttggtc
ctgcaaagattagctacctctgtcctgaaagatgaaaagagtaatctgaaggaagtactc
aatgctgtgaaagaactggagcttgcacacagatatttcagttacttgagtaaagttgga
gataaaatgagatttgatttggccctcgctgctacagaagccaggcaatgctctgactta
ctgagccaggcccagtaccacgtggccagggcgcgcaaacaggacgaagaagaaagggaa
ttgcgggccaaacaagaacaagagaaagaactgttaaggcagaaacttctcaaagaacag
gaagagaaacgtctcagagaaaaagaagagcaaaagaaacttttggaacagcgggcccag
tacgtagagaagaccaaaaatattcttatgtttactggagagactgaagcaacaaaagaa
aaaaaaagaggtggcagtggtggacggcggtccaagaagggaggagagtttgatgagttt
gtcaacgatgacaccgatgatgacctgcctatatccaaaaagaagaagagaaggaagggc
agtggtagtgagcaagaaggcgaggaggaggagggtggcgagagaaagaagaagaagagg
agaagacctccgaagggagatgaaggatctgatgatgatgaaacagaaaatggccccaaa
ccgaaaaagcgccgtctaccaagagcagagaagaagaaggctcccaagccggaacgtctg
cctccttcaatgaagggaaaaataaaatccaaagccataatatcatcaagtgacgattca
tctgatgaagataaactgaaaattgctgatgaaggacatccccgcaacagcaacagcgac
agcgactccgacgagggccagcggcggaagacgggcgcctcctcggaggagagtgagtcc
gacgagaaccagaacaagtccggcagcgaggccggcagcccccggcggccccggaggcag
cactcggatgaggactcagacagcgaccagccggccagaaagcgcaggccctcgggctcc
gaacagtctgacaacgaatccctgcagtctgggcggagccgctcggggggctctgagatg
gactctcggcccgcgtccccgagcgccgagtcggaccgctactccgagagagcatctgac
aacgaggggtccggccgaggctccggcagaggctccggcaatgaatccgaacccgaggga
tccaacaacgaggcctcggatcagggctcagaacgtggttcggatgatagcgactag
DBGET
integrated database retrieval system
