Physeter macrocephalus (sperm whale): 102989424
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Entry
102989424 CDS
T06011
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03008
Ribosome biogenesis in eukaryotes
pcad05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102989424 (DROSHA)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
102989424 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102989424 (DROSHA)
03009 Ribosome biogenesis [BR:
pcad03009
]
102989424 (DROSHA)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102989424 (DROSHA)
Enzymes [BR:
pcad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
102989424 (DROSHA)
Messenger RNA biogenesis [BR:
pcad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
102989424 (DROSHA)
Ribosome biogenesis [BR:
pcad03009
]
Eukaryotic type
90S particles
RNase
102989424 (DROSHA)
Prokaryotic type
rRNA processing factors
102989424 (DROSHA)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
102989424 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
5_3_exonuc
YcaO
Motif
Other DBs
NCBI-GeneID:
102989424
NCBI-ProteinID:
XP_023975172
Ensembl:
ENSPCTG00005008990
UniProt:
A0A2Y9SFV2
LinkDB
All DBs
Position
8:complement(42073189..42199694)
Genome browser
AA seq
1373 aa
AA seq
DB search
MQGSTCHRLSFHPGRGCPRGRGGHGSRPSAPAFRPQNLRLLHPQQPPVQYQYEPPSAPST
TFSNAPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPSHQMRPPFPVPPCFPPMP
PPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVVPQQVNYQYPPGYSHHSFPPPN
FNSFQNNLSSFSPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRRRDHSHGRG
ERHRSLDRRERGRSPDRRRQDGRYRSDYDRGRTPSRHRSYERSRERERERHRHRDSRRSP
SLERSYKKEYKRSGRSYGLPGASEPAGCTPELPGEIIKNTDSWAPPPETVNHRSPSREKK
RARWEEEKDRWSDNQSSGKEKNCSSVKEREPEESLPDRNEEEEEELLKPVWIRCTHSESY
YSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESSS
ESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSAK
ARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYIF
EGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELYD
WNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIAN
MLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQ
LSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTVE
LSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHPS
HHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPSR
INHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRF
MLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLNY
PLHPLQLQEPNTDRQLIETSPVLQKLTEFEDAIGVIFTHVRLLARAFTLRTVGFNHLTLG
HNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAI
TNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDP
KSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAE
MGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEKEPDETEDIKK
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcagtacatgtcatagactgtcattccaccccggacgagggtgtccccgaggg
cgaggaggacatggatccagaccctcagcaccagccttcaggccccaaaatctgagactg
cttcaccctcagcagcctcctgtgcaataccaatacgaacctccgagcgccccttccacc
acgttctccaacgctccagctcccaatttcctgcctccacgaccagactttgtgcccttc
cccccacccatgcctccatcagcacaaggcccccttcccccctgcccgatccggcccccc
ttccccagccaccagatgaggcccccctttcccgtgcctccctgttttcctcccatgccg
cctccgatgccctgtcccaataaccccccagtccctggagcacctcctggacagggcact
ttccccttcatgatgccccctccatccatgccccaccccccgcctcctcccgtagtgcct
cagcaggtcaattaccagtaccctccgggatactcgcaccacagtttcccacctcccaat
tttaatagcttccagaacaacctcagttccttctcacccagtgctaataatagcagtagc
cctcattttaggcacctccctccatacccactcccaaaggcccccagtgagaggaggtcc
ccagagaggctcaagcactatgacgatcaccgacgccgagatcacagtcacgggcggggc
gagaggcatcgatccctggaccggcgggagcgaggccgaagtcccgacaggagaaggcag
gacggccgctacagatccgattacgaccgggggaggacaccgtcccgccacagaagctat
gagcggagcagagagcgggaacgggagagacacaggcaccgggacagccgaagatcacca
tctctggaaaggtcctacaaaaaagagtataagagatctggaaggagttatggtttgccg
ggtgcttctgaacctgctggatgcacaccagaattacctggggagattattaaaaataca
gattcttgggccccacccccggagactgtgaatcatcgctccccaagtagggagaagaag
agagctcgttgggaggaagaaaaagacagatggagtgacaaccagagctccggcaaagag
aagaattgtagctcagtcaaggaaagagagccggaggagtcgctgcctgacagaaatgag
gaggaggaggaagagctccttaagcctgtgtggatccgatgcacccactcagaaagctac
tactccagtgaccccatggatcaggtgggagattctacggtagttggaacgagtaggctc
cgcgacttatatgacaaatttgaggaggagttggggagcaggcaggagaaggccaaagct
gctagacccccatgggagcctcccaagacgaagctcgatgaagatttagagagttccagt
gaatccgaatgtgaatccgatgaggacagcacctgttctagcagctcagactctgaagtt
ttcgacgtcattgcagaaatcaaacgcaaaaaggcccatcctgaccgacttcacgatgag
ctttggtataatgacccaggccagatgaatgatggcccactctgcaaatgcagcgcaaaa
gcgagacgcacgggaatcaggcacagcatttatcccggagaagaggccatcaagccctgt
cgtcctatgaccaacaatgctggcagacttttccactatcgaattacagtctcacctcct
acaaactttttaaccgacaggccaactgttatcgaatatgatgatcatgagtatatcttt
gaaggattttctatgtttgcacacgcccccctgaccaatattccactgtgtaaagtaatt
agattcaacatagactacacaattcatttcattgaggagatgatgcctgagaatttttgt
gtgaaaggacttgaactcttttcattatttctattcagagatattttggaattgtatgac
tggaatcttaaaggtcctttgtttgaagacagtcctccctgctgcccaagatttcatttc
atgccacgttttgtaagatttcttccagacggaggaaaggaagtactgtccatgcaccag
atcctcctttacttattacggtgtagcaaagccctggttcccgaagaggagattgccaat
atgcttcagtgggaagaacttgagtggcagaaatatgcggaagaatgcaaaggcatgatt
gtcaccaaccctgggacgaaaccaagctctgtccgcatcgatcaactggatcgcgaacag
ttcaaccccgatgtgattacttttccgattatcgtccactttgggatacgccctgcacag
ttgagttatgctggagacccacagtaccagaaactgtggaagagttacgtaaaacttcgc
cacctcctagcaaatagccctaaagtcaaacaaactgacaagcagaagctggcacagagg
gaggaagcgctccaaaaaatacgacagaagaataccatgaggcgagaagtaacagtggag
ctgagtagccaaggattctggaaaactggcatccgttctgatgtctgtcagcatgcaatg
atgctgcctgttttgacccatcatattcgctaccaccagtgcctaatgcatctggacaag
ttgataggatatactttccaagatcgttgtctgttacagctggccatgacccacccgagt
catcacttaaattttggaatgaatcctgatcatgccaggaattctttgtctaactgtgga
attcggcaacccaaatatggagatagaaaagttcatcacatgcacatgcggaaaaaagga
attaacaccttaataaatattatgtcacgccttggccaagatgacccaactccctcaagg
attaatcacaacgaacggttggagttcctgggtgatgctgttgttgaatttctgaccagt
gtccatttgtactatttgtttcctagtctagaagagggaggattagcaacctatcggact
gccattgttcagaaccagcaccttgccatgctagcaaagaaacttgaactggatcgattt
atgctttatgctcatggacctgacctttgtagagaatcagaccttcgacatgccatggct
aattgttttgaagcattaataggagctgtttacttggagggaagcctggaggaagccaaa
cagttatttggacgcttactctttaatgatccggacttgcgcgaagtctggctcaattat
cctctccacccactccagcttcaagagccaaatactgatcgacaacttattgagacttct
ccagttctacagaaactgactgaatttgaagacgcaattggagtaatttttacccatgtt
cgacttttggccagagcattcacattgagaactgtgggatttaaccatctgaccctaggc
cacaatcagaggatggaattcctcggtgactccataatgcagctggtagccacggagtac
ttattcattcatttcccagatcatcatgaaggacacttaactctgttgcgaagctctttg
gtgaataacagaactcaagccaaggtagcagaggaattgggcatgcaggaatatgccatc
accaacgacaagaccaagaggcctgtggcccttaggaccaagaccttggccgaccttttg
gaatcatttattgcagctctgtacattgataaggatttggaatatgttcatactttcatg
aatgtttgtttctttccacgattaaaagagttcattttgaatcaggattggaatgacccc
aaatcccagcttcagcagtgttgcttgacacttaggacagaaggaaaagagccagacatt
cctctgtacaagactctgcagacagtggggccatcccatgctaggacctataccgtggct
gtctacttcaagggagaaagaatcggctgtgggaaaggcccaagtattcagcaagcagaa
atgggagcagcaatggatgcgcttgaaaaatataactttccccagatggcccatcagaag
cggttcattgaacggaaatacagacaagagttaaaagaaatgaggtgggaaagagagcat
caagagaaagagccagatgagactgaagacataaagaaataa
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integrated database retrieval system
