Physeter macrocephalus (sperm whale): 102989466
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Entry
102989466 CDS
T06011
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X3
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03082
ATP-dependent chromatin remodeling
pcad04714
Thermogenesis
pcad05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102989466 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
102989466 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102989466 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102989466 (SMARCC2)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102989466 (SMARCC2)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102989466 (SMARCC2)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102989466 (SMARCC2)
PBAF complex
102989466 (SMARCC2)
GBAF(ncBAF) complex
102989466 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
102989466
NCBI-ProteinID:
XP_023978823
Ensembl:
ENSPCTG00005016069
UniProt:
A0A2Y9SK83
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEVEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQQTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATRE
WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLA
YQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVE
EAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGTDEARAEGQATEEKKEPKEPREGVG
AIEEEAKEKTSEAPKKDDEKGKDGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVE
SEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLE
IKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQP
PPQALPPGSQPVPPAGAAGPPAVHGLALAPASMAPASAGSGAPPGSLGPSEQIGQAGSTA
VPQQQQAAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLG
LPFGMPPPPPAPSIIPFGSLADSISINLPPPPNLHGHHHHLPFAPATLPPPNLPVSMANP
LHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPMPDPGTPLPPDPTAP
SPGTVTPVPPTQ
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctctggctcggcaagaactacaagaagtatatacaa
gctgaaccacctaccaacaagtccctgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaac
gtggaaatgttcatgaccattgagaaatccttggtgcagaataattgcctgtctcgacct
aacatttttctgtgcccagaaattgaacccaaactgctagggaaattaaaagacattatc
aagagacatcagggaactgtcactgaggataagaacaatgcctcccatgttgtgtatcct
gtcccagggaacctggaggaagaggaatgggtacggccagtcatgaagagggataagcag
gttcttctgcactggggctactatcctgacagttacgacacgtggatcccagccagtgaa
gttgaagcatctgtggaagatgccccgactcctgagaaacctaggaaggttcatgcaaag
tggatcctggacacagacaccttcaatgaatggatgaacgaggaagactatgaagtaaat
gatgacaaaaaccctgtctcccgccgaaagaagatttcagccaagacactgacggatgag
gtgaacagcccagattcagatcgacgggacaagaagggggggaactataagaagaggaag
cgctccccatccccttcaccgaccccagaagctaagaagaagaatgctaagaaaggtccc
tcaacaccttataccaagtcaaagcgtggccacagagaagaggagcaagaagatctgaca
aaggacatggatgagccctcaccggtccccaatgtggaagaggtgacactgcccaagaca
gtcaatactaagaaggactcagagtcagccccagtcaaaggaggcaccatgactgacctg
gatgaacaagaggatgaaagcatggagaccacgggcaaggatgaggatgagaacagcacg
gggaacaagggggagcagaccaagaatccggacctgcatgaggacaacgtgaccgaacag
acccatcacatcatcatcccaagctatgctgcctggtttgactataatagtgttcatgcc
atagagcggagggctctccctgagttcttcaacggcaagaacaagtccaagactccagaa
atctacctggcctatcgaaacttcatgatcgacacttaccggctgaacccccaagagtat
ctcacgtccactgcctgccgcaggaacctggcgggtgatgtctgtgccatcatgagagtc
catgccttcctggaacagtggggtcttattaactaccaggtggatgctgagagtcgacca
acaccaatggggcctccgcccacctcgcacttccacgtcttggcggacacaccgtctggg
ctggtgcctctgcagcccaagaccccgcagcagacctctgcttcccagcaaatgctcaac
ttccctgataaaggcaaggagaaaccgacagacatgcagaactttgggctgcgcacagac
atgtacacaaagaagaacgtcccctccaagagcaaagctgcggccagtgccactcgagag
tggacagaacaggagaccctgctactcctggaggcactggaaatgtacaaagatgactgg
aacaaagtgtcagagcacgtgggaagccgcacacaggacgaatgcatcttgcattttctt
cggcttcccattgaagacccgtacctggaggactcagaggcctccctgggccccctggcc
taccagcccatccctttcagccagtcaggcaaccctgtgatgagcaccgttgccttcctg
gcctctgtcgtcgaccctcgagtggcctctgctgctgcgaagtcagccctagaagagttc
tccaaaatgaaggaagaggtacccacagccttggtggaggcccacgttcggaaagtggaa
gaagcagccaaagtgacaggcaaagcagacccagcctttggtctggaaagcagtggcatt
gcaggaaccacctctgatgagcctgagcggattgaggagagcgggactgacgaggcgcgg
gcggagggccaggccacagaggagaagaaggagcccaaggaaccacgagaaggagttggg
gctatagaggaagaagcaaaggagaagaccagcgaggcgcccaagaaggatgacgagaaa
gggaaagacggcgacagcgagaaggagtcagagaagagtgacggggacccgatagttgat
cctgagaaggagaaggagcccaaggaagggcaggaggaagtgctgaaggaagtggtggag
tcggagggggaaaggaagacgaaggtggagcgtgacatcggcgagggcaacctctccacc
gctgcggccgctgccctggccgccgctgccgtgaaggccaagcacttggctgccgttgag
gagaggaagatcaaatctctggtggccctgctggtggagacccagatgaaaaagttggaa
atcaaactccggcactttgaggagctagagacgatcatggaccgggagcgagaagcactg
gagtatcagaggcagcagctcctggccgacagacaagccttccacatggagcagctgaag
tacgcggagatgagggcccggcagcagcacttccagcaaatgcaccaacagcagcagccg
cccccgcaagccctgcccccgggctcccagcctgtcccacctgcgggcgctgctgggcca
cccgctgtccacggcttggctctggctccagcctccatggcccctgcctctgcgggcagt
ggggcccctcccggaagcttgggcccctctgaacagattgggcaggcagggtcaactgca
gtgccacagcagcaacaagcagctggagccccccagcctggggcagtcccaccaggggta
cccccccctggaccccacggcccctcaccgttccccaaccaacaaactcctccctcaatg
atgccaggggcagtgccaggcagcgggcacccaggcgtggcgggtaatgctcctttgggt
ttgccttttggcatgccgcctcccccccctgctccatccatcatcccatttggtagccta
gccgactccatcagtattaacctcccccctcctcctaacctgcatgggcatcaccaccat
ctcccgttcgccccggccactctccccccccctaacctgcctgtgtccatggcgaaccct
ctacatcctaacctgccggcgaccaccaccatgccatcttctttgcctcttgggccgggg
ctcggatccgccgcagcccagagccctgccattgtggcagctgttcagggcaacctcctg
cccagtgccagcccaatgccagacccaggcacacccctgcctccagaccccacggccccg
agcccaggcacagtcacccctgtgccgcccacacagtga
DBGET
integrated database retrieval system
