Physeter macrocephalus (sperm whale): 102989505
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Entry
102989505 CDS
T06011
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102989505 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102989505 (DCP1B)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102989505 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
102989505 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
102989505
NCBI-ProteinID:
XP_023984971
UniProt:
A0A2Y9T1Y4
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Position
6:53904045..53957140
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AA seq
553 aa
AA seq
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MAAAAAAGCPAGKGRDISLAALRRHDPYISRIVDVASQVALYTFGHRANEWEKTDVEGTL
FVYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEE
CQRIAELMKNLTQYEQLKAHRGAGVGASPVSLSSGEGREADILRMLTKAKDEYTKCKARP
EPKQISSSSAIYDNPNLIKPIPVKPGGSRQQRGPRPGQTSDPEPQHLSLTALFGKEDKAT
CQEAAGPPKTLRQQQQEKLPIRQGVVRSLSYEEPRRRSPPVEKQLCPAIQKLLVGSADLQ
PLAELPESRPCGAAARPGSPRGPEVCRRAHGAPRTQNPPDQLQSIPGPPAPAASAETPGP
RALPRPAPPGPGPGRQPPGPSEVSPRELLWKLQAVQQEQQLPAPGRPALAAKFPVATPSA
RARNPLESWRDQTPGAEQQAPLLQVLSPRRAPPAAGPSPLMSPLEFAQPPWAPPPERGSG
PLPPGSQDPAASPSGPLLPLRTPEPPRTPGGALSKPQLQEALLHLVQNDDNFLNIIYEAY
LFSLTQAAMKKTL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggcaggctgcccagctgggaaggggcgcgacattagcttggcg
gccctgcggcgccacgacccctacatcagccgcatcgtggacgtggccagccaggtggcc
ctgtacaccttcggccaccgggccaacgagtgggaaaagactgacgtggaaggaacctta
tttgtttacacaaggtctgcttctccgaaacacggcttcaccatcatgaacaggctgagc
atggagaataggacagagcccatcacgaaagacctggatttccagctccaggaccccttc
cttctctacagaaatgccagattgtccatttatggaatttggttttacgacaaggaagaa
tgccaaagaattgcagagcttatgaaaaacctcactcagtacgaacagttgaaagcccac
cgcggagcgggagtgggggcgtcccccgtgagcctcagctcgggagagggcagggaggcg
gacatcttacggatgcttaccaaggccaaagacgaatacacgaagtgtaaagcccgtcct
gagcccaaacagatcagcagctcgtccgccatctacgacaaccccaatctcatcaagccg
attccagtgaagcccggtgggagccggcagcagcgcggccctcggcccggccagacctca
gaccctgaaccccagcacctgtccttgacggctctcttcgggaaggaggacaaagctacg
tgtcaggaagccgcggggcctccaaagaccctccgccagcagcagcaagagaagcttccg
atccggcagggggtcgtccgctccctgtcctacgaggaaccccgaagacgctcgcccccg
gtcgagaagcagctctgtcccgccattcagaagctcctggtcgggagcgcggacctgcag
ccgctggcagagctgcccgagagccggccctgtggagccgccgcccggccagggtctccc
cgcggccccgaggtctgccgccgcgcgcacggtgcccccaggactcagaacccgccggac
cagctccagagcatccctgggccgccggcaccagccgcctcggccgagacgccggggccc
cgcgcgctcccgaggccagcgccccccggccctgggcccggccgtcagcccccggggccc
agcgaggtctccccgcgggagctgctgtggaagctgcaggcggtgcagcaggagcagcag
ctgccggcgcccggccgccccgccctggcggccaagttccccgtggccaccccgagcgcc
cgggcacggaaccccctggagtcctggagggaccagacccccggcgcggagcagcaggct
cccctccttcaggtcctctcgccccggcgcgccccgcccgccgcgggcccatctccgctc
atgtcgccactggagttcgcgcagcccccctgggccccgccgccagagaggggcagcggg
cccttgcccccgggaagccaggacccagcggccagccccagcggccccctcctgcccctg
cggacgccggagccccccaggacgccgggcggtgccctgagcaagccgcagctccaggag
gccctgctacacctcgtccagaatgacgacaacttcttaaatataatctacgaagcctat
ctcttcagcctgacacaagcggccatgaagaagactctgtga
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