Physeter macrocephalus (sperm whale): 102989510
Help
Entry
102989510 CDS
T06011
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03018
RNA degradation
pcad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102989510 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
102989510 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102989510 (LSM8)
03041 Spliceosome [BR:
pcad03041
]
102989510 (LSM8)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102989510 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
102989510 (LSM8)
Spliceosome [BR:
pcad03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102989510 (LSM8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
102989510
NCBI-ProteinID:
XP_023988109
Ensembl:
ENSPCTG00005003422
UniProt:
A0A2Y9TIA6
LinkDB
All DBs
Position
5:complement(32385287..32391812)
Genome browser
AA seq
96 aa
AA seq
DB search
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgccttggagaactacatcaaccgaactgttgctgtcattacttctgatggg
agaatgattgtgggaacactgaaaggttttgaccagaccattaatttgattttggatgaa
agccacgaacgagtgttcagctcttcacagggagtagaacaagtggtactaggtttatac
atcgtgagaggtgataatgttgcagtcattggagaaattgatgaagagacagattctgca
cttgatttggggaatattcgagcagaacctctgaactctgtagcacactaa
DBGET
integrated database retrieval system
