Physeter macrocephalus (sperm whale): 102989704
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Entry
102989704 CDS
T06011
Symbol
ALS2
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad05014
Amyotrophic lateral sclerosis
pcad05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102989704 (ALS2)
05022 Pathways of neurodegeneration - multiple diseases
102989704 (ALS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcad03036
]
102989704 (ALS2)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
102989704 (ALS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
MORN
RCC1_2
VPS9
RhoGEF
PH
CCDC47
Motif
Other DBs
NCBI-GeneID:
102989704
NCBI-ProteinID:
XP_023980347
Ensembl:
ENSPCTG00005003300
UniProt:
A0A2Y9SSC3
LinkDB
All DBs
Position
2:complement(105445462..105529123)
Genome browser
AA seq
1657 aa
AA seq
DB search
MDSKKKSSTEAEGSKERGLVHVWQAGSRSVTPESLPGWGGKTVLHAALGVKHGVLLTEDG
EVYSFGTLPWRSEPAEICPSSPILEEVLVGQYVVTVATGSFHNGAVTESGVVYMWGENSA
GQCAVANQQYVPEPNPVSISDSETSPLLAVRILQLACGEEHTLALSLSREIWAWGTGCQL
GLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPSQDLKPVPERCNQCSQLLI
TMTDKEDHVIISDSHCCPLGMTLSESQSEKQASTAISPSTETLDGQGEVFENTFVQNELP
AATELDVGNVQTTSVETISSPQDVMGTPEISSARSIPSYPDTQAVNEYVQKLSDHSVREN
SENGEKPVPSQPLVAEAIPNLHSPATTSTSALNSLVVSCASAVGVRVAATYEAGTLSLKK
VMNFYSTAPCEPGAQAGSSPIGPEGLKDSREEQVKQESMQGKKSSSLVDIREEESEGGSR
RLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLG
HGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLGHSDFPTTV
PRLVKVNSENGVWSVAAGQDYSLFLVDTEDFQPGLCYSGRQNPTEGDNLPENHSGTKTPI
LLSCSKLGYISRVTAGKDSYLALVDKNIMGYIASLHELATTERRFYSKLSDIKSQILRPL
LSLENLGTASTVQLLQEVASRFSKLCYLIGQHGTSLSSFLQGIKEARSLVILKHASLFLD
SYTEYCTSITNFLVMGGFQLLAKPAIDFLNKNQELLQDLSEVNDENTQLMEILNTLFFLP
IRRLHNYAKVLLKLATCFEVTSPEYQKLQDSSSCYESLALHLGRKRKEAEYTLGFWKTFP
GKMTDSLRKPERRLLCESSNRALSLQHAGRFSVNWFILFNDALVHAQFSTHHVFPLATLW
AEPLSEEAGGVNGLKITTPEEQFTLISSTPQEKTKWLRAISQAVDQALRGMSDFPPYGSG
SSIQRQEPPISRSAKYTFYKDPRLKDATYDGRWLSGKPHGRGVLKWPDGKMYSGMFRNGL
EDGYGEYRIPNKALNKEDHYVGHWKEGKMCGQGVYSYASGEVFEGCFQDNMRHGHGLLRS
GKLTSSSPSMFIGQWVMDKKAGYGVFDDITRGEKYMGMWQDDVCQGNGVVVTQFGLYYEG
NFHLNKMMGNGVLLSEDDTIYEGEFSDDWTLSGKGTLTMPNGDYIEGYFSGEWGSGIKIT
GTYFKPSLYESDKDRPKVFRKLGNLAVPADEKWKAVFDECWHQLGCENPGQGEVWKAWDN
IAVALTTSRRQHRDSPEILSRSQTQTLESLEFIPQHVGAFSVEKYDDIKKYLIKACDTPL
HPLGRLVETLVAVYRMTYVGVGANRRLLQEAVKEITSYLKRIFQLVRFLFPELPEEGTTI
PLSAPLPTERKSFCTGKSDSRSESPEPGYVVTGSGLLLPVLLPRLYPPLFMLYALDNDRE
EDVYWECVLRLNKQPDIALLGFLGVQRKFWPVTLSILGESKKVLPTTKDACFASAVECLQ
QISTTFTPSDKLKVIQQTFEEISQSVLASLQEDFLWSMDDLFPVFLYVVLRARIRNLGSE
VHLIEDLMDPYLQHGEQGIMFTTLKACYYQIQREKLN
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggactcaaagaagaaaagctcaacagaagctgaaggatccaaagaaagaggcctggtc
catgtgtggcaggcaggctcccgttctgtaacaccagagagcttgccaggctggggagga
aagactgttcttcatgcggcccttggagtgaaacatggagttcttctgactgaagatggt
gaggtctacagctttgggaccctcccctggagaagtgaaccagcagagatttgtccgagt
agccccattctagaagaggtgctggttgggcagtatgtcgttactgtggcaacagggagt
ttccacaacggagcagtgacagaaagtggcgtagtgtacatgtggggggagaactctgct
ggccagtgtgcggtagctaaccagcagtatgttccggaaccaaatcctgtcagcatttct
gattccgagaccagtcctttgttagctgtcaggatcttgcagctggcatgtggcgaggag
cacactctggcgttgtccctaagcagagagatttgggcatggggtaccggttgtcagttg
ggtctcattaccactaccttcccagtgacaaagccacaaaaggtggaacatcttgctggg
cgagtagtgctacaagttgcctgtggtgcgttccacagcttagccctggtgcagtgcctc
ccttcccaggatctgaagccagtgccagaaagatgtaaccagtgcagccagctgttaatt
acaatgactgacaaagaagaccatgtgattatatcagacagccattgctgtccattaggc
atgacactgtcagaatcccagtcagaaaaacaggccagcactgccatcagcccctccact
gaaacccttgatggccagggagaagtgtttgagaacaccttcgtacaaaatgagctgcct
gctgctacggaactggatgttggaaatgttcagaccacaagtgttgagaccatttcctcc
ccacaagatgtcatgggaacacctgaaatttcttctgcaagaagtataccatcgtaccct
gacactcaggcagtaaatgaatatgtgcagaaactgtcagatcattcagtaagagagaac
tcagagaatggtgaaaaaccagtgccatctcagcctcttgtagcagaagcgattcctaat
cttcacagcccagcaaccacaagcacttcggccctgaacagcctagtggtctcttgtgca
tctgctgttggtgtgagagtggctgctacatatgaagctgggaccttgtctcttaagaaa
gttatgaacttttatagtacagccccttgtgaacctggagctcaggcaggcagtagtccc
ataggcccagaaggtctgaaagatagcagagaagaacaggttaaacaggagtcaatgcaa
ggaaagaagagttcaagtcttgtggatatcagagaagaagaatcagagggaggcagccga
agactctctctccctggattgttgtcacaagtctcccccaggctcttgagaaaagctgca
cgggtgaaaacgcggacagtggttctgacccctacatacagtggagaagcggatgcgctc
ctgccttctctgagaacagaggtgtggacctgggggaaagggaaggaaggacagctgggg
catggtgatgttctgcctaggcttcaaccattgtgtgtaaaatgtctggatggtaaagaa
gtaatccatctggaggcaggtggttaccattctcttgcacttactgcgaaatcccaggtt
tactcatggggtagcaatacctttggtcaacttgggcattctgattttccaacaacagtt
cctcgtcttgtaaaggtgaacagtgaaaatggagtctggagtgtagctgcaggccaggat
tattccctgtttttagtggatactgaagacttccagcctggattatgttacagtggccgg
cagaacccgacagaaggtgacaaccttccagagaatcacagtggtactaagactccaata
cttctctcctgtagtaagcttggatatataagcagagtgacagcaggaaaagacagctat
ctagccttggtggacaaaaacattatgggatatattgccagtctccatgagttggctact
acagaaagacggttctattcgaaactaagtgatatcaagtctcagattctgaggcctctt
ctcagtttagaaaatttgggcactgcaagtacagtccagctgttgcaggaggtggcaagc
cggttcagcaagctgtgttacctaattggtcaacatggaacctcactgagcagcttcctt
caggggataaaggaagccaggagtttggtcatcctgaagcatgcaagtctcttcttggat
agttatacagagtattgcacatctattacaaatttcctggttatgggaggattccagctt
cttgctaagcctgccattgatttcctaaataaaaaccaggaactattgcaagatttatca
gaagtgaatgatgaaaacacccaattgatggaaatattgaataccctgtttttcttgcca
atcagacgacttcataattatgccaaagttttgctaaagcttgctacttgttttgaagtg
acatctccagaataccagaaacttcaggattccagttcttgttatgagtctcttgctctc
catctcggcaggaaaaggaaggaagcagaatacacactgggtttctggaagacctttcct
ggaaaaatgacggattccttgaggaagccagagcgtcgactgctgtgcgagagcagtaac
cgggccctgtctctgcagcacgctgggaggttttctgtgaattggttcattctctttaat
gatgccctagtccatgcccagttctccacacaccatgttttccctttggccacactgtgg
gcagagccactttctgaagaagctggtggtgtgaatggcctaaagataactacacctgag
gagcagttcactctcatttcatcaacaccccaggaaaagacaaagtggctccgggctata
agccaagctgtggatcaggctttgagggggatgtctgattttccaccttatggaagtggc
agcagtattcagaggcaggaaccacccatttcacgcagtgccaaatatactttctacaag
gatcctcgcctaaaggatgcaacctatgatggacgctggctttcagggaagcctcatggc
agaggggttttgaagtggccagatggaaagatgtattctggcatgttcaggaatggcttg
gaagatgggtatggagaatacagaatcccaaacaaagcactgaacaaagaagaccattat
gtgggccattggaaagaaggaaaaatgtgtggtcaaggagtctatagttacgcctctggt
gaagtttttgaaggctgttttcaagataacatgcgtcatggtcatggtctcctgcgaagt
ggaaagttgacttcctcttctcccagtatgttcattggccagtgggtaatggataagaaa
gcaggatacggtgtctttgatgatatcactagaggggagaagtacatgggaatgtggcaa
gatgatgtatgtcaagggaatggtgtggtagttacccagtttggattatactatgaaggc
aacttccaccttaataaaatgatgggaaatggagttttactttctgaagatgatactatc
tatgagggagaattttcagatgattggaccctgagtggaaagggaacattgactatgcca
aatggagactacattgaaggttattttagtggagaatggggatctgggataaaaatcact
ggaacgtactttaagcctagtctgtatgagagtgataaagacagacctaaagttttcagg
aagcttggaaacctggcagtgccggctgatgagaagtggaaagcagtgtttgatgaatgt
tggcatcagctcggctgtgagaacccaggccaaggggaagtttggaaagcgtgggacaat
attgctgtggccctgactaccagtcggcgccaacacagagacagtccagagatattaagt
cgttcacagactcagacactagagagtttggaattcattcctcagcatgttggtgccttc
tctgtggagaaatatgatgacatcaagaaatatttaataaaggcctgcgacactcctctg
cacccactgggcaggctcgtggagacactggttgcagtgtatagaatgacatatgtgggt
gtgggagccaaccgccggctgctgcaggaggctgtgaaggagattacgtcctacctgaag
cgaattttccagctggtgaggttcttatttcctgagcttcctgaagagggcaccacaatt
cctctctctgctcctctgccaactgaaagaaaatccttttgcactgggaagtcagattcc
agatcagaatcaccagagccaggttacgtggtaacaggttctgggttactgcttcctgtg
ctcctacctcggctctacccaccactgttcatgctttatgccctggataatgatcgtgag
gaggatgtttactgggaatgtgttctccgactaaataagcagccagacattgctcttttg
ggcttcctcggggtgcagaggaaattttggccagtgaccttgtcaatccttggagagagt
aaaaaggttttgccaaccacaaaagatgcttgttttgcctcagctgtagaatgtctacag
cagatcagcacaacatttaccccatcagacaaacttaaagtcatccagcagacttttgaa
gagatctctcagagtgtcctggcatcacttcaggaagacttcttgtggtccatggatgat
ttgtttcctgttttcttatatgtggtgctacgggccaggattaggaatttaggctctgaa
gtacacctcatcgaggatctgatggacccatatcttcagcatggggaacagggtataatg
ttcaccactttgaaggcatgttactaccagatccagcgtgagaagcttaactag
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integrated database retrieval system