KEGG   Physeter macrocephalus (sperm whale): 102990020
Entry
102990020         CDS       T06011                                 
Symbol
SDC4
Name
(RefSeq) syndecan-4
  KO
K16338  syndecan 4
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad04512  ECM-receptor interaction
pcad04514  Cell adhesion molecule (CAM) interaction
pcad04820  Cytoskeleton in muscle cells
pcad05205  Proteoglycans in cancer
pcad05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102990020 (SDC4)
   04514 Cell adhesion molecule (CAM) interaction
    102990020 (SDC4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102990020 (SDC4)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    102990020 (SDC4)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    102990020 (SDC4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:pcad00535]
    102990020 (SDC4)
Proteoglycans [BR:pcad00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   102990020 (SDC4)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 102990020
NCBI-ProteinID: XP_007115541
Ensembl: ENSPCTG00005021443
UniProt: A0A2Y9F772
LinkDB
Position
Unknown
AA seq 201 aa
MAPARLLALLWLLVGALAVAAESIRETEVIDPRDLLEGRHFSGDLPDDEDVGVPGQEPHD
FELSGSGDLDDSEDTPIFPEVIHPLVPLDNHIPEKTGLGSRVPTEPKELEENEVIPKRMS
PFDGDEDVSNKVSMSSTAQGSNIFERTEVLAALIVGGGVGILFAIFLVLLLVYRMKKKDE
GSYDLGKKPIYKKAPTNEFYA
NT seq 606 nt   +upstreamnt  +downstreamnt
atggcccccgcccgcctgctcgcgctgctgtggctcctcgtgggcgcccttgccgtcgcc
gccgagtcgatccgagaaactgaggtcatcgacccccgagacctcctagaaggccgacac
ttttccggagacttaccggacgatgaggatgttggggtacctgggcaggagccccatgac
tttgagctgtctggctctggagatctggatgactcagaggacaccccgatcttcccggaa
gtgatccatcccttggtgcctctagataaccacatccctgagaagacaggacttgggagc
cgggtccccaccgaacccaaggaactggaggagaatgaggtcatccccaagaggatgtca
ccctttgatggggatgaggatgtgtccaacaaggtgtccatgtccagcacagcccagggc
agcaacatctttgagaggacagaggttctggcagctctgattgtgggcggtggcgtgggc
atcctctttgccatcttcctggtcctgctgctggtgtaccgcatgaagaagaaggatgag
ggcagctacgacctgggcaagaaacctatctacaaaaaagcccccaccaacgagttctac
gcctga

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