Physeter macrocephalus (sperm whale): 102990110
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Entry
102990110 CDS
T06011
Symbol
SRSF5
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03040
Spliceosome
pcad05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102990110 (SRSF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcad03041
]
102990110 (SRSF5)
Spliceosome [BR:
pcad03041
]
Common components
Common spliceosomal components
SR proteins
102990110 (SRSF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
Motif
Other DBs
NCBI-GeneID:
102990110
NCBI-ProteinID:
XP_007113314
Ensembl:
ENSPCTG00005016942
UniProt:
A0A2Y9S6C4
LinkDB
All DBs
Position
11:150463028..150468069
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AA seq
274 aa
AA seq
DB search
MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
ELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVS
WQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIEGS
KRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSKSRSVSRSPVPEKSQKR
GSSSRSKSPASVDRQRSRSRSRSRSRSRSVDSGN
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgtcgagtattcatcgggaggctaaatccagcggcccgggagaaagacgtg
gaaagattcttcaaggggtatggacgaatacgagatattgatctgaaaagaggctttggt
tttgtggagtttgaggatcccagggatgcagatgatgccgtatatgaacttgatggaaaa
gaactctgcagtgaaagggttacaattgaacatgctagggctcgatctcgaggcggaaga
ggtagaggacgctactcagaccgttttagtagtcgcagacctcgaaatgatagacgaaat
gctccacctgtaagaacagaaaatcggcttatagttgagaatttatcttcaagagtcagc
tggcaggatctcaaagatttcatgagacaagctggggaagtaacctttgcggatgcacat
cgacctaaattaaatgaaggggtagttgagtttgcctcttatggtgacttaaagaatgct
attgaaaaactttctggaaaagaaataaatgggagaaaaatcaaattaattgaaggcagc
aaaaggcacagtaggtcacgaagcaggtctcgttcccggaccaggagttcctcgaggtct
cgtagccgatctcgttcccggagtcgcaagtcttacagccggtccaggagccggagccgg
agccggagcaagtcccgttctgttagtaggtctcctgtgcctgagaagagccagaaacgt
ggttcttcaagtagatctaagtctccagcatctgtggatcgccagaggtccaggtccagg
tcccggtcccggtcaaggtccagatcagttgacagtggcaattaa
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