Physeter macrocephalus (sperm whale): 102990238
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Entry
102990238 CDS
T06011
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03040
Spliceosome
pcad05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102990238
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102990238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102990238
03041 Spliceosome [BR:
pcad03041
]
102990238
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102990238
mRNA cycle factors
Common to processing body (P body) and stress granule
102990238
Spliceosome [BR:
pcad03041
]
Common components
Common spliceosomal components
hnRNP proteins
102990238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
102990238
NCBI-ProteinID:
XP_054946025
UniProt:
A0A9W2X3R8
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All DBs
Position
14:complement(22362066..22363094)
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AA seq
320 aa
AA seq
DB search
MSKSESSKEPEQLRKLFIGDLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKXSRGFGFV
TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFIGGIKEDTEEHH
LRDYFEQYGKIEVMEIMTDRGSRKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNSGHGGNFSGRGGFGGSHGGGGYGGS
GDGYNXSGNDGSNFGGGGSYNDFGSYNNQSSNFGPMKGGNLGGRSSGPYGGGGQYFATPR
NQGGYGSSSSSSSXGSGRRF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcagagtcatccaaagagcccgaacagctgcggaagctcttcatcggagat
ttgagctttgaaacaaccgatgagagtctgaggagccattttgagcagtggggaacgctc
acagattgtgtggtaatgagggatccaaacaccaaatgatccagaggcttcgggtttgtc
acatatgccactgtggaggaggtggacgcggccatgaatgcaaggccacacaaggtggat
ggaagagttgtggaaccaaagagggccgtctcaagagaagattctcaaagacctggtgcc
cacttaactgtgaaaaagattttcattggtggcattaaagaagacactgaagaacatcat
ctaagagattattttgaacagtatgggaagattgaagtgatggaaatcatgactgatcga
ggcagtcgcaaaaagagaggctttgctttcgtaacctttgatgaccatgactctgtagac
aagattgtcattcagaaataccacactgtgaatggccacaactgtgaagtaaggaaagcc
ctatctaagcaagagatggctagtgcctcatccagccaaagaggtcgaagtggttctgga
aactttggtggtggtcgtggaggtggttttggtgggaatgacaactctggtcatggagga
aacttcagtggtcgaggtggctttggtggcagccatggtggtggtggatatggtggcagt
ggggatggctataattgatctggtaatgatggaagcaattttggaggtggtggaagctac
aatgattttggcagttacaacaatcaatcttcaaattttggacccatgaaaggaggaaac
cttggaggcagaagttctggcccttatggtggtggaggccaatactttgccacaccccga
aaccaaggtggctatggcagttccagcagcagcagtagctaaggcagtggcagaaggttt
tga
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