Physeter macrocephalus (sperm whale): 102990362
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Entry
102990362 CDS
T06011
Symbol
AFDN
Name
(RefSeq) afadin isoform X6
KO
K05702
afadin
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04014
Ras signaling pathway
pcad04015
Rap1 signaling pathway
pcad04024
cAMP signaling pathway
pcad04520
Adherens junction
pcad04530
Tight junction
pcad04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
102990362 (AFDN)
04015 Rap1 signaling pathway
102990362 (AFDN)
04024 cAMP signaling pathway
102990362 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102990362 (AFDN)
04530 Tight junction
102990362 (AFDN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
102990362 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
RA_3
PDZ_2
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
102990362
NCBI-ProteinID:
XP_023978440
Ensembl:
ENSPCTG00005001219
UniProt:
A0A2Y9SPY4
LinkDB
All DBs
Position
10:complement(1798557..1932198)
Genome browser
AA seq
1786 aa
AA seq
DB search
MSAGGRDEERRKLADIIQHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCI
RVSSTATTQDVLETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDIDEKPLVVQLNWNK
DDREGRFVLKNENDAIPAKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAMRQ
ASDRDDRPFHGDDTENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRS
SDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLERENPKDYCIAR
VMLPPGAQHSDEKAAEEIILDDDECPLQIFREWPNDRGILVFQLKRRPPDYIPKKSQKHV
DGKPLHGKERVDGSGYGSALPPEKLPYLVELSPDGSDSRDKPKLYRLQLSVTEVGTEKFD
DGSIQLFGSGIEPHHCDLTNMDGVVTVTPRSMDAETYVDGQRISETTMLHSGMKVQFGAS
HVFKFVDPSQDHALPKRSVDGGLMAKGPRQRPGIVQETTFDLGGDVHSGTALPASKSSSR
LDGDRGLSAASTAERGMVKPVVRVEQLPDYRRQESRTQDTPGPDLILPASIEFRESSEDS
FLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPAERTHKVIAIVNKMVSMM
EGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAF
KYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLF
SQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIV
QATTLLTMDKYAPDDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFVPTDLMEHVVAVAE
NTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGLQEFLDPLCQRGFCRL
IPHPRSPGTWTIYFEGADYESHLMRENTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKG
AGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTL
EVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYNNSAQNGSPESPQMP
WAEYSEPKKLPGDDRLMKNRADHRSSPNVANEPPSPGGKGAYASGTAAKITSVSTGNLCA
EEQTPPPRAEAYPIPTQTYTREYFTFPASKSQDRTAPPQDQWPRYEEKPHVHTDSSHSST
AVQRVTRSQEELREDVGFHLERQRVEAAMERRSDGGDAWLNQGSSLGSSASSQEHLGPPS
RAGTPASTLTKSGPGRWKTPAASPPVRTDPPPGHYGAGDGDSVPADSPLPPPPTGAQVAA
ERKKREEQQRWYEKEKARLEEERERRRREQERRLGQLRAQAPPPGAPPPGPAAPPPGPAP
ARAPDTVIRELQPQQQPRTIERRDLQYITVSREELASGDSLSPDPWKRDAREKLEKQQQL
HIVDLLSREIQELQGKAERSAEESDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDT
VLLMQRLEAERRARLQDEERRRQQQLEEMRTREAEERARQEEQRARREAEEKRRQEEGYY
SRLEAERRRQHDEAERQLLEPEELGLGRPPLPRGYEPPAPGPPPPPQRTASYLQAQVLSP
DALYSAKLVAYTEEEEEEEEEEDGGPAGPNSYVGSAGTLIGAHDVYRDPREKPSKSQDAD
VPGGPGAPENLTFRERQRLFSQGHDVSNKVKASRKLTELENELNTK
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgggcggccgcgatgaggagcggcggaagctggccgacatcatccagcactgg
aacgccaaccggctggacctgttcgagatcagccagcccaccgaggatttggagttccat
ggagtgatgagattttattttcaagataaagctgctgggaactttgcaacaaaatgtatc
cgggtctctagtaccgccaccactcaggacgtgctggaaacgctcgcagagaaattccgc
cctgacatgcggatgttgtcctcacccaagtactcgctctacgaagtgcacgtcagcgga
gaagaaagaagattggatatagacgagaaaccccttgttgtgcagttgaattggaataag
gatgatcgagagggcagatttgttcttaagaatgagaacgacgccattcctgctaagaag
gctcagagtaacggacctgaaaagcaggaaaaagaaggtgttatccagaacttcaagaga
actctctcaaagaaagaaaagaaggaaaaaaagaagagagaaaaagaggcaatgaggcag
gcgtctgatcgagacgatagacccttccatggggatgacactgaaaattctcgactggct
gctgaggtttacaaagacatgcctgaaactagctttaccagaacaatttctaatcccgag
gtggttatgaaacgacggagacaacaaaaactggaaaagagaatgcaggaatttcggagc
tcagatgggcggcctgattcaggtggaacattgagaatttatgcagatagtttaaaacca
aatattccctacaagacgatcctgctgtctaccacagatcctgcagactttgctgtggct
gaggctttagagaagtacggtctggagagagaaaaccctaaggattattgcattgcccgc
gttatgcttcctcctggggctcagcattctgatgagaaggctgctgaagaaattatcctt
gatgatgatgagtgtcctttacagatcttcagggagtggccgaatgacagagggatttta
gtatttcagctgaaaaggaggccaccagactacatcccaaagaaaagccagaagcacgtg
gatgggaagcccctgcacggaaaggagcgagttgatgggtctggctacggctctgcactc
ccgccggagaaactgccctacctcgtagagctgagcccagatggctccgactccagagac
aagccgaagctctaccgccttcagctgagtgtcactgaggtcgggacggagaagttcgac
gacggctccatccagttgtttggttcaggaattgagccccatcactgtgacctcacaaac
atggatggagtggtcacggtcacgccgagaagcatggatgccgagacctacgtggacggg
cagcgcatctcggagacaacgatgctgcacagcgggatgaaggtgcagtttggggcgtcc
catgtgtttaagttcgtggaccccagccaggaccacgctctgcccaagagatccgtggat
ggaggcctgatggcgaagggtcccagacaaaggcctggaattgttcaggagacaactttt
gatttaggaggagatgttcatagtggaacagcattaccagcgagcaagagctcctccagg
ctggacggcgacagggggctgtctgccgccagcaccgccgagcgagggatggtgaagccc
gtggtcagagtggagcagctgccggactaccgcaggcaagagagcagaactcaggacact
cctgggcctgacctaatactgcctgcaagcattgaattcagggaaagttctgaagattca
tttttatccgccattataaattacactaatagctctacagtccattttaagttgtcacct
acgtacgtgttatatatggcgtgtcggtatgtattgtccagccagtacagacccgatgtc
agtcccgcagaacggacacacaaagtgattgccattgtcaacaagatggtgagcatgatg
gaaggggtcattcaggaagtagaccaggttgatcagaaacagaagaatattgcaggggca
cttgctttctggatggcaaacgcatctgagcttctcaacttcataaagcaggaccgagat
cttagtcgaatcacgttggacgcccaggatgttctagcacacttggttcaaatggccttt
aaatacctggttcactgtcttcagtcagaactgaataattacatgccagcctttctggac
gaccccgaagagaacagtctgcaaagaccaaaaatagacgacgtgctgcacacgctcacg
ggggccatgtcgctgctgcgccgctgccgggtcaacgctgcgctgaccatccagctcttc
tcccagctcttccacttcatcaacatgtggctgttcaacaggctggtgaccgaccccgag
tcggggctgtgctcccactactggggcgccatcatccgccagcagctcgggcacgtggag
gcctgggcggagaagcagggcttggagctggcagccgactgtcacctcagcaggatcgtg
caggcaaccactttgctcacgatggataagtacgcacccgatgacatcccaaatataaac
agtacctgcttcaagttaaattcactgcaacttcaagccttacttcagaattaccactgt
gcacccgatgagccttttgtccctacagacctgatggagcatgtggtggctgtggcagag
aacacagccgacgagctggcacgcagtgacgggcgggaggtgcagctggaggaggacccc
gacctgcagctgccgttccttctgcccgaggatggctactcctgcgacgtcgtcagaaac
atcccgaacggcttacaggagtttctggaccctttgtgccagagaggattttgcaggtta
attcctcacccacgttcaccaggcacttggacaatatatttcgaaggtgcagattatgag
agtcaccttatgcgggagaacacagaactggctcagcctctgaggaaagaacctgaaata
atcacggtgaccctcaaaaagcagaacggaatgggccttagcattgtcgcagcaaagggt
gctggtcaagacaagctgggaatctacgtcaagtctgttgtaaaaggaggtgctgctgat
gtggacgggcggctggctgcaggtgaccagctcctcagcgtggacggacggagtctggta
ggactctctcaagaaagggcagcagaactgatgacgaggacaagctccgtggtgacgctg
gaagtagccaagcaaggagccatttatcacggtctggctaccctgctcaatcagccgtcc
cccatgatgcagagaatttcagatcgtcgcggatcaggtaaaccccgaccaaagagtgaa
ggttttgagctctataataattcagctcaaaacgggtccccggagagccctcagatgcct
tgggcagaatacagtgaaccaaagaaattgcccggcgacgacaggctcatgaagaacagg
gctgaccaccgctccagccccaacgtcgcaaatgagccccctagtcccggcgggaaaggc
gcctacgcctctgggacagcggccaagataacgtccgtctccactggaaacctctgtgct
gaggagcagacccctccaccccgagccgaggcctaccccatcccgacgcagacctacacc
agggagtacttcaccttcccggcctccaagtcccaggaccgcacggctcctcctcaggac
cagtggccccgatatgaggagaagccccacgtgcacacggacagcagccactccagcact
gcagtccagcgtgtgacccggtcccaggaggaactccgggaggatgtcgggttccacctg
gaacggcagagggtggaggcggcgatggagcgcaggtctgacggcggcgacgcgtggctc
aaccagggctcctcgctgggctccagcgcgtccagccaggagcacctgggccccccctcc
agggcgggcacccccgcgtccacgctcaccaagagcggccctgggcgctggaagacccca
gccgcctccccgccggtgcggaccgacccgccccccgggcactacggcgccggcgacggg
gacagcgtccccgcggactcgcccctcccgccccctcccaccggggcccaggtggccgca
gagcggaagaagcgggaggagcagcagcgctggtacgagaaggaaaaggcgcgcctggag
gaggagcgcgagcgccggcggcgggagcaggagcgcaggctgggccagctgcgggcgcag
gcaccgccccccggggccccgccccccgggcccgcggccccgcccccagggcccgccccc
gcccgcgccccggacaccgtcatccgggagctgcagccccagcagcagccgcgcaccatc
gagcgccgggacctgcagtacatcacggtcagcagggaggagctggcctcgggggacagc
ctgtcccccgacccctggaagcgggatgcgcgggagaagctggagaagcagcagcagctg
cacatcgtggacctgctgagccgcgagatccaggagctgcagggcaaggccgagcgctcg
gccgaggagagcgaccgcctgcgcaagctcatgctggagtggcagttccagaagcggctg
caggagtccaagcagaaggacgaggacgacgaggaggaggaggacgacgacgtggacacc
gtgctgctcatgcagcgcctggaggccgagcgcagagcgcggttgcaggacgaggagcgg
cggcggcagcagcagctggaggagatgcggacccgggaggctgaggagcgggcccggcag
gaggagcagagggccagacgcgaggccgaagagaagaggcgacaggaggaggggtattac
agccgcctggaggccgagcggcgccgacagcacgacgaggccgagcgccagctgctggag
cccgaggagctgggcctgggccgccctccgctcccgcggggctacgagcccccggccccc
gggcccccgccgccgccccagcgcaccgcgtcctacctgcaggcgcaggtgctctccccc
gacgccctgtactctgccaagctcgtggcttacaccgaggaggaggaggaggaggaggag
gaggaggacggcggcccggcaggaccaaactcttacgtgggatctgctggaacactgatt
ggggcccatgacgtttatcgggatccgagagagaaaccgtctaaaagccaagacgcggat
gtacctgggggtcctggcgcccctgaaaacctgacgttcagagagcgccagcgcctcttc
tcccaaggccacgacgtctccaataaagtgaaagcctctcgcaaattaacggagctggag
aacgagctgaacacgaagtga
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integrated database retrieval system