Physeter macrocephalus (sperm whale): 102990374
Help
Entry
102990374 CDS
T06011
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102990374 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pcad04990
]
102990374 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
pcad04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
102990374 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
TSP1_CCN
ADAMTS_CR_3
PLAC
TSP1_spondin
Motif
Other DBs
NCBI-GeneID:
102990374
NCBI-ProteinID:
XP_023984619
Ensembl:
ENSPCTG00005009859
UniProt:
A0A2Y9T9C4
LinkDB
All DBs
Position
11:62976848..63549845
Genome browser
AA seq
1018 aa
AA seq
DB search
MVSCFLESLSVLGSLLLLGFQLVCPQPSTEHRKVPQRMAVAEGAPEDGGGGGAPGVWGAW
GPWSACSRSCSGGVMEQTRPCLPGSYRARGVPPPGAPARAFAGHVVSAVRTSVPLHRSRE
EPRAPASLNSSRQGPAQRGSRHPQARGREPTAERRSRTRGPIGPGMYGYGKAPYILPLQT
DSAQLPQRLRRQRPSSRNSRSQGASGSSHGYNLPAHRAPRHGPLYQSGSGPHPGLQVSEG
SIYQLPLTHDQGFPEASNLFHNPETSSSPGLGAHRAAQSFSQPARSTAISCIGAYRQYKL
CNTNVCPESSRSIWEVQCASYNNKPFMGRFYEWEPFAEAKGNRKCELNCQAMGYRFYVRQ
AEKVIDGTPCDQNGTAICVSGQCKSIGCDDYLGSDKVVDKCGVCGGDNTGCQVVSGVFKH
ALTSLGYHRVVEIPQGATKINITEMYKSNNYLALRSRSGRSIINGNWAIDRPGKYEGGGT
MFTYKRPNEISSTAGESFLAEGPTNEILDVYMIHQQPNPGVHYEYVIMGNNAISPQVLPH
RRPGEPFNGQLVPEAGNQQEGEGKEGDEEKADVHGGAPEIFTSESAQTFQVRHPDRFSPH
RPDNVVPPAPQTPRRSRDHNWKQLGTTECSTTCGKGSQYPIFRCVNRNTHEEVPESYCDP
SMKPTPEEEPCNIFPCPAFWDIGEWSECSKTCGLGMQHRQVLCRQVYANRSLTVQPYRCQ
HLEKPETTSTCQLKICSEWQIRTDWTSCSVPCGVGQRTRDVKCVSNIGDVVDDEECNMKL
RPNDIENCDMGPCAKSWFLTEWSERCSAECGAGVRTRSVVCMTNHISSLPLEGCGNNRPA
EATPCDNGPCTGEVEWFAGSWSQCSIECGSGTQQREVICVRKNADTFEVLDPYECSFLER
PPSQQSCHLKPCGAKWFNTEWSMCSKSCQGGFRVREVRCLSDEMTLSNLCDPQLKPEEKE
SCNPQDCVPEVDENCKDRYYNCNVVVQARLCVYNYYKTACCVSCTRVANRHSGFLGSR
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggtttcctgtttcctggagtctctcagtgtcctgggttccctcctgctccttggattc
cagctcgtctgcccacagccctccactgaacacagaaaggtcccgcagcggatggcggtg
gccgaaggcgctcccgaggacggcggcggcggcggcgccccgggcgtgtggggcgcctgg
ggcccctggtccgcctgctcgcgcagctgcagcggcggcgtgatggagcagacgcgaccc
tgcctgcccggctcgtaccgcgcacgcggcgtaccgccgcccggagcccccgcgcgcgcc
ttcgcaggccacgtggtgtcagccgtgcgtacgtcggtgccgctgcaccggagccgcgag
gagccacgcgcccccgccagcctcaactccagtcgccagggtccggcgcagcgaggcagc
cggcacccgcaggcccggggccgcgagcccacggcggagagaaggagcaggacccgaggt
cccatcggccccggcatgtatggctatggtaaggccccatacatcttaccactgcagacg
gactctgcacagctgccacagaggcttcggaggcagaggccctcatcccggaattccagg
tcccagggggcatctggttctagccatggatacaaccttccagcccaccgggccccccga
catggacctctgtaccagagtggcagtggccctcatcctggactgcaagtctcagagggc
tccatctaccagctgcctttgacccatgaccaaggcttccctgaagcctcaaatctcttc
cacaacccagaaacaagcagcagccctggcctgggggcccacagggcagctcagagcttc
tcccagcctgcccgatctacagcaatctcctgcattggggcctatcggcagtacaagctg
tgcaacacgaatgtgtgtccagaaagcagtagaagtatctgggaggtacaatgtgcatcc
tacaacaacaagccgttcatgggccggttttatgaatgggaaccgtttgcagaagccaag
ggcaatcggaagtgtgagctgaactgccaggcaatgggctaccgcttctacgtacggcag
gctgagaaggtcattgatggtaccccctgtgaccagaacggcacggccatctgcgtgtct
gggcagtgcaagagcattggctgtgatgactacctaggctccgacaaagtcgtggacaaa
tgcggggtgtgcggaggcgataacacaggctgtcaggttgtgtcgggtgtgtttaagcat
gccctcaccagcctgggctaccaccgagttgttgagattcctcaaggagccacaaaaatc
aacatcaccgagatgtacaagagcaacaactatttggccttgcgaagtcgttctggccgc
tccatcatcaacgggaactgggcaattgaccggcctggaaaatatgaaggaggagggacc
atgttcacatacaagcgaccaaatgagatttcgagcactgccggagagtcctttttggcc
gaaggtcccactaatgagatcttggatgtctatatgatacaccagcagcctaacccagga
gtccactacgagtacgtaatcatgggaaacaatgccatcagcccacaggtgctgcctcac
aggagaccaggggagcccttcaatggccagctggtaccagaagcggggaaccagcaggag
ggagaagggaaagagggggacgaagagaaggcagacgtgcatggaggggcacctgaaata
ttcacctcggaatcagcacagaccttccaggtcaggcatcctgatagattctctccccac
cggcccgacaatgtggtaccaccagcaccacagaccccacggcggagccgggatcacaac
tggaaacagctggggacgacggagtgctcgacaacctgtgggaaaggatcgcagtaccct
atttttcgctgtgtgaacagaaacactcacgaagaggttcctgagagctactgtgacccg
agcatgaagccgaccccggaggaggaaccctgcaacatcttcccttgcccagccttctgg
gacatcggggagtggtctgagtgcagcaaaacctgtggcctgggcatgcagcaccgccag
gttctgtgtcgccaggtgtatgccaaccgcagcctgacagtgcagccctaccgctgccag
cacctggagaagcccgagaccaccagcacctgccagctcaagatctgcagcgagtggcag
atccggacggactggacctcgtgctcggtgccctgcggagtggggcagaggacccgcgat
gtgaagtgtgtgagcaacatcggggacgtggtcgatgacgaggaatgcaacatgaaactc
cggcccaacgacattgagaactgcgacatgggaccctgcgccaagagctggttcctgaca
gagtggagcgagaggtgctcggcagagtgtggggctggagtgcggacacgctcggtggtg
tgtatgaccaaccacatcagcagcctgccgctggagggctgcgggaacaaccggccagcg
gaggccaccccgtgtgacaacgggccctgcacgggcgaggtggagtggtttgcgggaagc
tggagtcagtgttccatcgagtgtgggagcgggacccaacagagggaggtgatttgtgtt
aggaagaacgctgacacctttgaagtgctggacccctatgaatgttccttcctggagaga
ccccccagccagcaatcctgccacctcaagccctgcggagccaaatggtttaacacagaa
tggagcatgtgttccaagagctgccagggcggctttcgcgtccgggaagtgcgctgtctg
tctgatgagatgaccctaagtaatctctgtgaccctcagttgaaaccagaagagaaagaa
tcttgtaaccctcaggactgcgtccctgaagttgatgaaaactgcaaggacaggtactac
aactgcaacgtggtggtccaggccaggctctgcgtctacaactactacaagaccgcctgc
tgcgtctcctgcacgcgcgtggccaacaggcactcgggcttcctggggagcagataa
DBGET
integrated database retrieval system
