Physeter macrocephalus (sperm whale): 102990434
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Entry
102990434 CDS
T06011
Symbol
SCARB1
Name
(RefSeq) scavenger receptor class B member 1 isoform X4
KO
K13885
scavenger receptor class B, member 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03272
Virion - Hepatitis viruses
pcad04145
Phagosome
pcad04913
Ovarian steroidogenesis
pcad04925
Aldosterone synthesis and secretion
pcad04927
Cortisol synthesis and secretion
pcad04934
Cushing syndrome
pcad04975
Fat digestion and absorption
pcad04976
Bile secretion
pcad04977
Vitamin digestion and absorption
pcad04979
Cholesterol metabolism
pcad05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
102990434 (SCARB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102990434 (SCARB1)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
102990434 (SCARB1)
04925 Aldosterone synthesis and secretion
102990434 (SCARB1)
04927 Cortisol synthesis and secretion
102990434 (SCARB1)
09154 Digestive system
04976 Bile secretion
102990434 (SCARB1)
04975 Fat digestion and absorption
102990434 (SCARB1)
04979 Cholesterol metabolism
102990434 (SCARB1)
04977 Vitamin digestion and absorption
102990434 (SCARB1)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
102990434 (SCARB1)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
102990434 (SCARB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102990434 (SCARB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcad04147
]
102990434 (SCARB1)
Membrane trafficking [BR:
pcad04131
]
Endocytosis
Phagocytosis
Scavenger receptors
102990434 (SCARB1)
Exosome [BR:
pcad04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102990434 (SCARB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
DuoxA
Motif
Other DBs
NCBI-GeneID:
102990434
NCBI-ProteinID:
XP_023976536
Ensembl:
ENSPCTG00005015475
UniProt:
A0A2Y9SCY0
LinkDB
All DBs
Position
19:complement(20238965..20339813)
Genome browser
AA seq
509 aa
AA seq
DB search
MGSHSRARRVAAALGFAGLLCAVLGVIMIVMVPSIIKQQVLKNVRIDPSSLSFNMWKEIP
VPFYLSVYFFDVVNPKEILQGQKPRVQERGPYVYREFRHKSNITFNDNDTVSFLEYRSFQ
FQPDKSRGLESDSIVMPNILVLSAAMMMENGPMSLKLIMTLAFSTLGERAFMNRTVSEIM
WGYEDPLIHIINKYFPNTFPFKGKFGLFAELNNSDSGLFTVFTGVKNFSRIHLVDKWNGI
SKVNFWHSDQCNMINGTSGQMWAPFMTPESSLEFYSPEACRSMKLIYKEQGVFEGIPTFR
FVAPNTLFANGSIYPPNEGFCPCRESGIQNVSTCRFNAPLFLSHPHFYNADPVLAEAVSG
LHPNPEEHSLFLDIHPVTGIPMNCSVKLQLSLYIKSVKGVGQTGKIEPVILPLMWFGESG
AMEGETLQTFYTQLVLMPRVLHYGQYVLLALGCVLLFIPIVYQIRSQEKCYLFWSSSKKG
SQDKEAIQAYSESLMTSAPKGTVLQEARL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggcagccactctagagcgcgccgggtggccgcggcgctgggcttcgccgggctgctg
tgcgccgtgctgggcgtcatcatgatcgtgatggtgccctcgatcatcaagcagcaggtc
ctcaagaatgtgcgcatcgaccccagcagcctgtccttcaacatgtggaaggagatcccc
gtccccttctacctctctgtctactttttcgatgtcgtcaaccccaaggagatcctccaa
ggccagaagccgcgggtgcaggagcgcggaccctacgtgtacagggagttcagacacaag
agcaacatcaccttcaatgacaatgacacggtgtccttcctcgagtaccgcagcttccag
ttccagcctgacaagtcccgcggcctagagagcgacagtatcgtcatgcctaacatcctg
gtcttgagtgcagcaatgatgatggagaatgggcccatgagcctgaagctgatcatgacc
ttggcgttcagcacccttggtgaacgggccttcatgaaccgcactgtcagcgagatcatg
tggggctatgaggatcccctcatccacatcatcaataagtacttcccaaacacgttcccc
ttcaagggcaagttcgggttatttgctgagctcaacaactctgattccgggctcttcact
gtgttcacgggggtcaaaaacttcagcaggatccatctcgtggacaagtggaacgggatc
agcaaggtcaacttctggcattccgatcagtgcaacatgattaatgggacttccgggcag
atgtgggcaccatttatgactcctgaatcctcgctggaattctacagccccgaggcctgc
cgatccatgaagctcatctacaaggagcagggggtgttcgaaggcatccccacctttcgc
ttcgtggctcccaacaccttatttgccaacgggtccatctacccgcccaacgagggcttc
tgcccgtgccgggagtccggaattcagaatgtcagcacctgcaggttcaacgcaccctta
tttctctcccatcctcacttctacaacgctgacccagtcctggcagaggcagtgtctggc
ctccaccctaacccagaagagcattccttgttcctggacatccacccggtcaccggaatc
cccatgaactgctctgtgaaactgcaactgagcctctacatcaagtctgtgaaaggcgtc
ggacaaactgggaagatcgagccggtgatcctgccactgatgtggtttggagagagcggg
gcaatggagggtgagacccttcagacgttctacacgcagctggtgttgatgcccagggtg
ctgcattatggccagtacgtgctccttgccctgggctgcgtcctgctgttcatccccatc
gtctaccaaatccggagccaagagaagtgctatttattttggagtagtagtaaaaagggc
tcacaggataaggaggccattcaggcctattctgaatccctgatgacgtcagctcccaag
gggactgtactgcaagaagcaagactgtag
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integrated database retrieval system
