Physeter macrocephalus (sperm whale): 102990460
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Entry
102990460 CDS
T06011
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcad04040
]
102990460 (SCN11A)
Ion channels [BR:
pcad04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102990460 (SCN11A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
102990460
NCBI-ProteinID:
XP_007110559
Ensembl:
ENSPCTG00005016043
UniProt:
A0A2Y9EYR3
LinkDB
All DBs
Position
18:complement(46656939..46726403)
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AA seq
1782 aa
AA seq
DB search
MDDRCYPVIFPDARNFRPFTPDSLAAIKKRIAIQKEKKKSKDQTAAEPQPRPQLDLKVSR
KLPMLYGDIPHELIGKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFILGPFNSIRS
LAIRISVHSLFSMFIICTVIINCVFMAMTRGKDSINVDSESAEYVFTGIYIFEALVKILA
RGFILDEFSFLRDPWNWLDSIVIATAFVSYSPYIKDSSISLSSLRTFRVFRALKAISVIS
GLKVIVGALLRSVKRLVDVMILTLFCLSIFALVGQQLFMGNLNQKCVRKDCDSDYKDYCF
EKKDSTEFRICGTWMESGACSEQFECKHTNKNPDYNYTNFDNFGWSFLAVFRLMTQDSWE
KLYQQTLRTSGLYSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNKNVAAETEAKEKMFQ
EAQQLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGNKKRKSFFLRKSGKDQVPGL
DSDEDSSKKPHLLEQTKRLSQNLSVDHSDEHGDPFQRQRALSAVSILTITMHEQEKSQEP
CLPCGKNLASKYLVWDCSPRWLCIKKALRTMMTDPFTELAITICIIINTLFLAMEHYKMD
QSFENMLYTGNLVFTGIFMAEMCLKIIALDPYHYFRRGWNIFDSIVALLSFAEVIINSMC
PGKQSCMSFRSLRVLRVFKLAKSWPTLNTLLKIIGHSVGALGNLTVVLAIVVFIFSVVGM
QLFGSKFNCIKSNSKSLDPAVPCLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQEANQ
ALCIIVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGHLEGEVRKTKVQLALDRFCRAFC
FIIYTLEHFCTKWCRRQHLPKQKEVTEGAEAESKGVILLVTEMRKGPETWEEFGVPTSAP
KTLSVGHDQTWLAPLAEEEDVAESPGEDKAQPVTQPEAGKQASELHQKTKEPTSLGAQSV
EMDIFSEDDPYLSIQNPRKKSDATSVLSECSTTGPQDPFRWVLEMVPKKEPERCLPKGLD
CCSPCCTMDKRKSPWIIWWKLRKTCYQIVKHSWFESFIIFVILLSSGALVFEDIYLGTQP
KIQAILNCTDSIFTYIFILEMGLKWVAFGFRKYFTSAWCWLDFIIVIVSVTSLIDLKVLK
SFRILRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVSLFSGKF
GRCVNVTDGNSVINYNIVANRSQCESGNFSWFTLKVNFDNVGMAYLALLQVATFKGWMDI
MYAAVDSRGEGQQPRFEENSLMYVYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKISGQD
IFLTEEQKKYYNAMKKLGSKKPQRPIPRPLNKCQCLVFDLVTHQVFDIIIIILIFLNMVS
MMAESYGQSKAMELFLERLNLAFVVVFTIECLIKIFALRQYYFTSGWNLFDCVIMVISIV
STMVSALKTQAHIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGL
LLFLVMFIYAIFGMNCFCKVKEESGIDDIFNFKTFKGSMLCLFQITTSAGWDALLSPMLQ
SKDSCNPKSENCHLSAIAITYFVSYIIISFLIMVNMYIAVILENFNIATEESEDPLGEDD
FEIFYEVWEKFDPEATQFIKYSALSDFADALPEPLRVAKPNKYQFLVMDLPMVSGDRLHC
LDILFAFTARVLGESSGLDSMKAVMEEKFMEANPFKKLYEPIVTTTKRKEEERCAAVIQK
AFRKYMMKTKCTLEDRPHSPLQTLCNGDLSSSGVAEGKVHYD
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaggtgctacccggtgatcttcccagacgcgaggaatttccgccccttcact
cctgactctttggctgcaatcaagaaacggatcgccatccaaaaggagaagaaaaagtcc
aaagaccagacagcagcagaaccccagcctcgacctcagcttgacctaaaggtgtccaga
aagttgcccatgctctatggtgacattccccatgagctgatagggaagcccctggaagac
ctggacccattctacagaaatcataagacatttatggtgttgaacaaaaagagaacaatc
taccgcttcagtgccaaacgtgccttgttcattttggggcctttcaattcaatcagaagt
ttagccattagaatttcagtccattcattgttcagcatgttcatcatctgcaccgtcatc
atcaactgcgtgttcatggccatgactcgtgggaaggacagcattaacgtagatagtgag
agtgctgagtatgtcttcactgggatttatatatttgaagcattagttaaaatattggca
agaggttttattctggatgagttttctttccttcgagatccgtggaactggctggactcc
attgtcattgcaacagcgtttgtatcatattcaccatatatcaaggacagcagcatcagt
ctgtcatctctgcgtaccttccgagtgttcagagctttgaaagcaatttctgtaatttca
ggtctgaaggtcattgttggggccttgctgcgctctgtgaagaggcttgtcgatgtgatg
atcctgactctcttttgcctcagcatcttcgccctggtaggtcagcagctcttcatggga
aatctgaaccagaaatgtgtgaggaaagactgtgactctgactataaagactattgcttt
gaaaagaaagattccactgaattcagaatatgtggcacatggatggagagcggggcttgt
tctgaacaatttgaatgcaaacataccaataaaaatcctgactataattacacgaatttt
gacaactttggctggtcttttcttgccgtgttccggcttatgacccaagattcctgggag
aagctttatcaacagactttgcgcacctcagggctctactcagtcttcttctttgtggtg
gtcatcttcctgggctctttctacttgattaacttaaccctggctgttgtcaccatggct
tacgaggaacagaacaagaatgtagctgctgagacagaagccaaggagaagatgttccag
gaagcccagcagctgttaaaggaggagaaggaggctctggttgccatgggtattgacaga
agttcacttaattcccttgaagcatcatctttttccccgaagaagagaaaactatttggt
aataagaaaagaaaatccttctttttgagaaagtctgggaaagaccaggttccaggatta
gattctgatgaagattcttcaaaaaagccacacctacttgaacaaaccaaacgactgtcc
cagaatctgtcagtggaccacagtgatgagcacggagaccccttccaaaggcagagagca
ctgagcgctgtgagcatcctcaccatcaccatgcacgaacaagaaaaatcacaggaacct
tgcctcccatgtgggaaaaacctggcatcaaaatacctcgtgtgggactgtagcccccgg
tggctgtgcattaagaaggccctgagaaccatgatgaccgacccctttactgagctggcc
atcaccatctgcatcataatcaacactctcttcttggccatggagcattacaaaatggac
cagagttttgagaatatgttgtacacagggaatttggttttcactggcattttcatggct
gaaatgtgcctaaaaatcattgcgctggatccctaccactactttcgtcgagggtggaac
atttttgacagcattgttgctcttctgagttttgcagaggtgataataaatagtatgtgt
ccaggaaaacaaagttgtatgtcatttcgttccttaagagtgctgagggtcttcaagtta
gccaaatcctggccaactttaaacacactgcttaagataattggccattccgttggagcc
cttggaaacctgactgtggtcttggccattgtggtctttattttctcagtagttggcatg
cagctttttggctctaaattcaattgcataaagagtaattcaaagtcccttgatcctgca
gtcccatgtttacgacgctggcacatgggggatttctaccactcctttctggtggtattc
cgcatcctctgtggggaatggatcgaaaacatgtgggaatgtatgcaagaagctaaccaa
gcactgtgcattattgtgtttctgttgatcatggtgataggaaaactcgtggtactcaac
ctcttcattgccttgctgctcaattccttcagcaatgaggagagagatggacacttagaa
ggagaggtcaggaaaaccaaagtccagttagccctggaccggttctgccgggctttttgt
ttcatcatatatactcttgagcatttttgtaccaagtggtgcaggagacaacatttaccg
aagcaaaaagaggtgacagaaggtgctgaggcagagagcaaaggtgttattctcctggtc
acagagatgagaaagggcccagagacctgggaggagtttggtgtaccgacttctgcacca
aagaccttgagtgtcgggcatgatcagacttggttggccccactagcagaagaagaagat
gttgctgaatcccctggtgaagataaggcacagcctgtcacacaacctgaggctggaaaa
caggccagtgaactccatcagaagaccaaggagcccaccagtctaggagctcagagtgtg
gaaatggacatattctctgaagatgatccttatctgtcgatacagaatccccgaaagaag
tctgatgctacgagtgtgctctcagaatgtagcaccactggtccacaggatccctttcgg
tgggtactggaaatggttcccaaaaaggaaccagagagatgtttgcccaaaggcctggat
tgctgctctccatgctgtactatggacaagagaaagtccccctggatcatttggtggaag
ctgcggaaaacctgctaccaaatagtgaaacacagctggtttgagagctttattatcttt
gtgattctgctgagcagtggggcactggtatttgaagatatttaccttggtacacaaccc
aaaatccaagcaatacttaattgtactgacagtattttcacatacatttttatcttggag
atgggtttgaaatgggtggcctttggatttaggaagtatttcaccagtgcctggtgctgg
ctcgatttcatcattgtgattgtctctgtgaccagtctcatcgacttaaaggtcttgaag
tccttccggattctgcgagcgctgaggcctctgcgagccctgtcccagtttgaaggaatg
aaggtggtagttaacgctctcataggtgccatacctgccattctgaatgttttgcttgtc
tgcctcattttctggctcatattttgtatcctgggagtaagtttgttttctggaaaattt
ggaagatgcgttaatgtaacagatggaaactcagttataaattacaacattgttgcaaac
cggagtcaatgtgaaagtggaaatttctcctggttcaccctgaaagtcaactttgacaat
gtgggaatggcttacctcgcgctactgcaagtggcaacatttaagggctggatggatatt
atgtatgcagctgttgattccagaggggaaggacaacagccaaggtttgaggagaactca
ttaatgtatgtttacttcgtagtttttatcatctttggctcattcttcactctgaatctc
tttattggtgttattattgacaacttcaaccaacagcagaaaaagataagtggccaagac
atctttctgacagaagaacagaagaaatactataatgcaatgaaaaaattaggatccaaa
aaacctcaaaggcccatcccaaggcctctgaacaaatgccagtgtcttgtttttgaccta
gttacacaccaggtctttgacatcatcatcatcatcctcattttcctcaacatggttagc
atgatggctgaatcatatggccagtccaaagccatggaactcttccttgagcgtctcaac
ctggcctttgtggtcgtctttacaattgagtgtctcatcaaaatctttgctttgaggcaa
tactacttcaccagtggctggaatttatttgattgtgtgatcatggtcatttctattgtt
agtacaatggtttctgccttgaaaacccaggcacacattcctttccctccaacactcttc
agaattgtccgcttggctcggattggccgaatcctgagacttgttcgggcagcacgagga
atcagaactctccttttcgcgctgatgatgtctcttccctctctattcaatattggtctt
ctactctttctggttatgtttatttacgccatttttggtatgaactgtttttgcaaagtg
aaggaagagtctggaattgatgatatattcaacttcaaaactttcaaaggcagcatgctc
tgcctcttccagataaccacgtcagcaggctgggatgccctcctcagccccatgttgcaa
tcaaaagactcatgtaaccccaagtctgagaactgtcacctctctgccatagccataacc
tacttcgtcagttatatcatcatctcctttctcatcatggtcaacatgtatattgctgtg
attttagaaaacttcaatatagccactgaagaaagtgaggaccctttgggtgaagacgac
tttgaaatattctacgaagtctgggaaaagtttgacccagaagcaacacaatttatcaaa
tattctgctctttctgactttgctgatgcccttcctgagcctctgcgtgtggcaaagcca
aataaataccaatttttagtcatggacttgcccatggtgagtggagatcgccttcattgc
ctggatattctgttcgctttcaccgctagggtacttggtgagtccagtggcctggatagc
atgaaagcagtgatggaggagaagttcatggaagccaaccctttcaagaagttatatgaa
cccatagtcaccaccaccaagaggaaggaagaggaaagatgtgctgctgttattcaaaag
gcctttcgaaagtacatgatgaagaccaagtgtaccttggaagacaggcctcattcaccc
ctccagacactctgcaatggagacttgtccagctctggggtggctgagggcaaggtccac
tatgactga
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integrated database retrieval system
