Physeter macrocephalus (sperm whale): 102990934
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Entry
102990934 CDS
T06011
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03013
Nucleocytoplasmic transport
pcad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102990934 (PNN)
03015 mRNA surveillance pathway
102990934 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102990934 (PNN)
03041 Spliceosome [BR:
pcad03041
]
102990934 (PNN)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102990934 (PNN)
Spliceosome [BR:
pcad03041
]
Complex C
Other components
EJC/TREX
102990934 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
102990934
NCBI-ProteinID:
XP_007117577
Ensembl:
ENSPCTG00005011826
UniProt:
A0A2Y9F935
LinkDB
All DBs
Position
11:122086895..122092970
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AA seq
725 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDIGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKSEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIGIVHSDAEKEQEEEEQKQ
EMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMEINQVESIEPSENE
TSKELEPEVEFEVEPDKECKSLSPAKENASALEMENEPEEKEEKEPEPQPEPVAQPQSLP
QPQPQPHSQSHSQSHSQSQPVLQPEPLSQPETLPLALPQLPPQVIQEQGHLPPERKEFPV
DSVKLTEVMVEPVLTVHSESKSKTKTRSRSRGRARNKASKSRSRSSSSSSSSSSSTSSSS
GSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTTSSSESRSRSRGRGHNRDRKHRRSVDR
KRRDASGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDR
KDKRR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcagtgagaactttgcaggagcagctagaaaaggccaaagagagcttaaag
aatgtggatgagaatattcgcaagctcaccgggcgggatccgaatgacgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatattggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgtcggactcggagagaatcacgccaagaaagc
gacccagaggacgatgatgttaagaagccagctttgcagtcttcagttgtagctacctcc
aaagagcgcacacggagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttgttgatgggcacccttcagaaatttaaacaagaatcc
actgttgctactgaaaggcaaaagagacgccaggaaattgaacagaaacttgaagtgcag
gcagaagaagaaagaaagcaggttgaaaatgagaggagagaactgtttgaagagaggcgt
gctaaacagacagaactgcggcttttggaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgagcataatgccaagataattaaatatataagaactaaaacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaaactaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaagtcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaaataggtatagttcatagtgatgcagagaaagaacaggaggaggaggaacaaaagcag
gaaatggaagttaagatggaggaggaaactgaggtaagggaaagtgagaagcagcaggat
agtcagcctgaagaagttatggatgtgctggagatggtcgagagtgtcaaaaatgtaatt
gctgagcaggaggtaatggaaatcaaccaagttgaaagcatagaaccttcagaaaatgaa
actagcaaagaattggagccagaggtggaatttgaagttgagccagataaagaatgtaaa
tctctttctcctgcaaaagagaatgctagtgctctagaaatggaaaatgagcctgaggaa
aaagaagaaaaagaacctgagccccagcctgagcctgtggctcagcctcagtccctgcct
cagccccagccccagccccactcccagtcccactcccagtcccactcccagtcccaacca
gtactccagcccgagcctctctctcagcctgagactttgccattagctcttccacagcta
ccacctcaggttattcaggagcaagggcatttaccacctgagaggaaggagtttcctgta
gactctgtaaaactcactgaggtgatggtagaaccagtcttgaccgtacattcagagagc
aagagcaaaaccaaaacgaggagcagaagtagaggtcgggctagaaataaagcaagcaag
agtagaagtcgaagcagtagcagtagtagttctagtagcagttcaaccagtagcagcagt
ggaagcagttccagcagtggcagtagcagtagtcgaagtagttccagtagcagctccagt
acaagtggcagcagcagtagagacagtagcagcagcactactagtagtagtgagagtaga
agtcggagtaggggccggggacataacagagatagaaagcacagaaggagcgtggatcgg
aagcgaagggatgcttcaggactagaaagaagtcacaaatcttccaaaggaggtagtagt
agagatacaaaaggatcaaaggataagaattcccggtctgacagaaagaggtctatatca
gagagtagtcggtcaggcaaaagatcttcaagaagtgaaagagaccgaaaatcagacagg
aaagacaaaaggcgttaa
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