Physeter macrocephalus (sperm whale): 102990994
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Entry
102990994 CDS
T06011
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102990994 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102990994 (SMARCA5)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102990994 (SMARCA5)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
102990994 (SMARCA5)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
102990994 (SMARCA5)
RSF complex
102990994 (SMARCA5)
WICH complex
102990994 (SMARCA5)
B-WICH complex
102990994 (SMARCA5)
NORC complex
102990994 (SMARCA5)
BRF complex
102990994 (SMARCA5)
NuRF complex (fruit fly)
102990994 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
102990994
NCBI-ProteinID:
XP_023982404
Ensembl:
ENSPCTG00005001535
UniProt:
A0A2Y9T2T8
LinkDB
All DBs
Position
7:26368099..26413607
Genome browser
AA seq
1052 aa
AA seq
DB search
MSSAADPPPPPPPESAPSKPATSAAGSGNNNSNKGGPEGVAAQAAASAASAGAGDSEMEE
VFGDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKM
KPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKL
RDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKST
LHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKF
NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFN
SADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ
REWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVT
NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQE
SINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTK
TVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATH
VFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYR
EKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPR
LFELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQ
GFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKI
MAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLH
KLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEK
AEKKKRGPKPSTQKRKIDGAPDGRGRKKKLKL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcggccgaccctccgccacccccgcctcccgagagcgcgccttccaagccc
gcaacctcggccgccggcagcgggaacaacaacagcaacaaaggcggccccgagggcgtc
gcagcccaggcggctgcctctgcggccagcgccggcgccggggactccgagatggaggaa
gtatttggtgatgcgtctcctggaaagcaaaaagaaatccaagaaccagatcctacctat
gaagaaaaaatgcaaactgaccgggcaaatagatttgagtatttattaaagcagacagag
ctgtttgcacatttcattcagcctgctgctcagaagactccaacctcacctttgaagatg
aaaccagggcgcccacgaataaaaaaggatgagaaacagaacttgctgtcagttggcgac
tatcgtcaccgaagaacagagcaagaggaggatgaagaattattaacagaaagctccaaa
gcaaccaatgtttgcactcgatttgaagactctccgtcgtatgtaaaatggggtaaactg
agagattatcaggtccgaggattaaattggctcatttctttgtatgagaacggcatcaat
ggtatcctagcagatgaaatgggcctgggaaagactcttcaaacaatttctcttcttggg
tacatgaaacactatagaaacattcctggtcctcatatggttttggttcctaagtctaca
ttacacaactggatgagtgaattcaagagatgggtaccaacacttagatctgtttgttta
ataggagataaagaacaaagagctgcttttgtcagagacgttttattaccaggagaatgg
gatgtatgtgtaacatcttatgaaatgcttattaaagagaagtctgttttcaagaaattt
aattggaggtacttagttatagatgaagctcacaggatcaaaaatgaaaaatctaagttg
tcagaaatagtgagggaattcaagactacaaatcgactattattaactggaacacctctt
caaaacaacttgcatgagctttggtcacttcttaattttttgttgccagatgtctttaat
tcggctgatgactttgattcctggtttgatacaaacaattgccttggggatcaaaagcta
gttgagaggcttcatatggttttgcgtccattcctccttcgtcgaattaaggctgatgtt
gaaaagagtttgcctccaaagaaggaagtaaaaatctacgtgggtctcagcaaaatgcaa
agggaatggtatactcgtatattaatgaaggatatagatatactaaactctgcagggaag
atggacaaaatgaggctattgaacatcctgatgcagttgaggaaatgctgtaatcaccca
tatctctttgatggagctgaacctggtccaccttacacaacggacatgcatctagttacc
aacagtggcaaaatggtggtgttagacaaactgctccctaaattaaaagaacaaggttca
cgagtactaatcttcagtcagatgacgagggtattggatattttggaagattattgtatg
tggagaaattatgagtactgtagattggatgggcagacaccccatgatgagagacaagag
tccatcaatgcatacaatgaaccaaacagcacaaagtttgttttcatgttaagcacacgt
gctggtggtcttggcatcaatcttgctaccgctgatgtagtaattttgtatgactcagat
tggaatccccaagtagatcttcaggctatggatcgagcccatagaattggacaaaccaag
acagtcagagtgttccgcttcataacggataacactgtagaagaaagaatagtggaacgt
gctgagatgaaactcagactggattcaatagtcatacaacaaggaagacttgtggatcag
aatctgaacaaaattgggaaagatgaaatgcttcaaatgataaggcatggggcaacacat
gtatttgcttcaaaggaaagcgagattactgatgaggatattgatggtattttggaaaga
ggtgcaaagaagactgcagagatgaatgaaaagctctccaagatgggtgaaagctcactt
agaaactttacaatggatacagagtcgagtgtttataactttgaaggagaagattataga
gaaaaacaaaagattgcattcacagagtggattgaaccacctaaacgagaaagaaaagcc
aactatgctgttgatgcctatttcagggaagctcttcgtgtcagtgaacctaaagcaccc
aaggctcctcgacctccaaaacaacctaatgttcaggatttccagttctttcctccacgt
ctatttgaattattggaaaaagaaattctatattacagaaaaacgattgggtacaaggtg
cctcgaaatcctgacctaccaaatgcagcacaggcacaaaaagaagaacagcttaaaatt
gatgaagctgaaccccttaatgatgaagagttagaggaaaaagagaagcttctaacacag
ggatttaccaattggaataagagagattttaaccagtttatcaaagccaatgagaagtgg
ggtcgtgatgatattgaaaatatagcaagagaagtagaaggaaaaactccagaagaagtc
attgaatactcagctgtgttctgggaaagatgcaatgagctgcaagacatagagaagatt
atggctcagattgaaaggggagaggcaagaattcaaagaagaattagtatcaaaaaagca
cttgacacgaagattggacggtacaaagcaccttttcatcagctgagaatatcttatggt
actaacaaaggaaaaaactacactgaagaagaggatcgttttctgatctgtatgcttcac
aagcttggatttgacaaagaaaatgtttatgatgaattgcgacagtgtattcgcaactct
cctcagttcagatttgactggtttctaaagtccagaactgcaatggagctccagaggagg
tgtaacactttaattaccttgattgaaagagaaaacatggaactagaagaaaaggagaag
gcagagaaaaagaaaagaggaccaaaaccttcaacccagaaacgtaaaatagatggagca
cctgatggccgaggaagaaaaaagaagctgaaactatga
DBGET
integrated database retrieval system
