Physeter macrocephalus (sperm whale): 102991008
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Entry
102991008 CDS
T06011
Symbol
SF1
Name
(RefSeq) splicing factor 1 isoform X2
KO
K13095
splicing factor 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102991008 (SF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcad03041
]
102991008 (SF1)
Spliceosome [BR:
pcad03041
]
Complex A
Other components
Complex A specific factors
102991008 (SF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
zf-CCHC_3
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
102991008
NCBI-ProteinID:
XP_023988934
Ensembl:
ENSPCTG00005014576
UniProt:
A0A2Y9TJP1
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All DBs
Position
16:complement(102469543..102483498)
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AA seq
667 aa
AA seq
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MATGANATPLGKLGLPGPKGGFEPGPPPAPGPGTGLLVSGPPPPPPVGSVGALTAAFPFA
ALPPPPPPPPPPPPPPPQQPPPPSPGSSYPPPQPPPPPPLYQRVSPPQPPPPPQPPRQDQ
HPGPAGGGGDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDL
TRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNP
DFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKG
SVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRK
MQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDPQ
SAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMST
TQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPP
PPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPP
PPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQRSLPAAAMARAMRV
RTFRAHW
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggagcgaacgccacgccgctgggtaagctgggcctccctggccccaaaggg
ggcttcgagccggggccaccgcctgcccccgggcctgggacggggctgctggtgtccggg
ccgccgccgcccccgcccgtgggctcggtgggggccctgaccgcggccttccccttcgcg
gcgctgccgccgccgcccccgccgcccccgccgccgccccccccacctccccagcagccg
ccgccgccctccccgggctcctcgtacccgccgccgcagccgccccctccgccgccgctc
taccagcgcgtgtcgccaccgcagccgccgccgccaccccagccgccgcgtcaggaccag
cacccgggcccggccggtggcggaggagactttcccagtaagaagcggaagaggagccgc
tggaaccaagacacaatggaacagaagacggtgattccaggaatgccaacggttatcccc
cctggacttactcgggaacaagaaagagcttatatagtgcaactgcagatagaagacctg
actcgtaaactgcgcacaggagacctgggcatcccccctaaccctgaggacaggtcccct
tcccctgagcccatctacaatagcgaggggaagcggcttaacactcgcgagttccgcacc
cgcaaaaagcttgaagaggagcggcataacctcatcacggaaatggttgccctcaaccct
gatttcaagccacctgcagattacaaacctccagcaacacgtgtgagcgataaagtaatg
attccacaagatgagtatccagaaatcaactttgtggggctgctgattgggcccagaggg
aacaccttgaagaacatagagaaggagtgtaatgccaagatcatgatccgggggaaaggc
tctgtgaaagaagggaaagtcgggcgcaaagatggccagatgttgccaggagaagatgag
ccgcttcatgccctggttactgccaataccatggagaatgtgaagaaagcagtagaacag
ataagaaacattctgaagcagggtatcgagactcctgaggaccagaacgatctacggaag
atgcagcttcgagagttggctcgtttgaatgggacccttcgggaagacgataacaggatc
ttaagaccctggcagagctcggagacccgcagcattaccaataccacagtgtgtaccaag
tgtggaggggctggccacattgcttccgattgcaaattccaaaggcctggtgacccccag
tcagctcaggataaagcgcggatggataaagaatacttgtccctcatggctgaactgggg
gaggcacctgtgcccgcatctgtgggctccacctctgggcctgccaccacacccctggcc
agtgcacctcggcccgctgctcccgccaacaatccacctccgccgtctctcatgtccact
acccagagccgcccaccctggatgaattctggcccgtcagagagtcggccctaccatggc
atgcacggaggtggccctggtgggcccggaggtggcccgcacagcttcccacacccgtta
cccagcctgacgggcgggcatggtggacatcccatgcagcacaacccgaatggaccccct
cctccttggatgcagccgccgccaccaccgatgaaccagggcccccacccacctgggcac
catggccctcctccaatggatcagtacctgggaagtacgcctgtgggctctggggtctat
cgcctgcatcaaggaaaaggtatgatgccgccgccacctatgggcatgatgccgccgccg
ccgccgcctcccagtgggcagcctccacctcctccctctggtcctcttcccccatggcag
cagcagcagcagcagcctccgccaccccctccgcccagcagcagtatggcttccagtacc
cctttgccatggcagcaaagatccctccccgcggcggcgatggcccgagccatgagagtg
aggactttccgcgcccattggtga
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