Physeter macrocephalus (sperm whale): 102991012
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Entry
102991012 CDS
T06011
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcad04040
]
102991012 (SCN10A)
Ion channels [BR:
pcad04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102991012 (SCN10A)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
CcmD_alt
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
102991012
NCBI-ProteinID:
XP_023972805
Ensembl:
ENSPCTG00005014713
UniProt:
A0A2Y9S948
LinkDB
All DBs
Position
18:complement(46539997..46616792)
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AA seq
1943 aa
AA seq
DB search
MDFPFGSLETTNFHRFTPESLVEIEKRIAAKQEAEKAKKKSKKQKDHEEKPRPQLDLKAC
NQLPKFYGELPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITLTILVNCVGMTQTELPERMEYVFTVIYTFEALIKILARGF
CLNEFTYLRDPWNWLDFSVITLAYVGEAVDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVRKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVKNCTVVNETANYSSHEKREW
NFCHRDPDFYTNKPGTSDPLLCGNGSDSGHCPEGYFCLKTSDNPDFNYTSFDSFAWAFLS
LFRLMTQDSWERLYQQTLRASGKIYMFFFVLVIFLGSFYLVNLVLAVVTMAYEEQNQATI
DEIEAKEKKFQEALEMLRTEQEVLAALGVDTASLHSHNGSPLASKNASVRRHRMKPRVSE
GSTDDNKSPQTESYNEHRMSFLGLTSGRHQASLGSVFHFQAPGRDISFPDGVTDDGVFPG
DRESHRGSLLLGRDASQQDPLPRSPLPQTPNPGLGRGEDGLPTLPTGELAPGAIEVSASD
AGQKTYLTAEYLNKPFRAQRAMSVVSIMTSVLEDLEESKQRCPPCLTSLAQKYLIWDCCP
TWVKLKTLLFAIVTDPFAELTITLCIVVNTIFMAMEHYGMSPAFEAMLQIGNIVFTVFFT
AEMVFKIIAFDPYYYFQKKWNVFDCIIVTVSLIELAAVRKGSLTVLRTFRLLRVFKLAKS
WPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGDNFRDNRRKISAPNEEWPR
WHMHDFFHSFLIIFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALL
LNSFSTDNLTAPEDDGEVNNLQVALARIQVLVRCTKKTLCSFLNWPFLLPRPKAEPQLVV
KLPLSTSKAENHITADTAAGSPGGLLTPRGPRDDHSDFITNPNIWVSVPIAEGESDLDDL
EDDDEEDAQSTQKEVIPQGKEQLQQVGRYEDHLPPRSSGSGMSPEALAPYLGEKWKDEAP
AQGPTEGVDDMSSSEGSTVDCLDPEEILRKIPELADDLDEPDDCFTEGCIRHCPCCKVNS
SKFPRAMGWQVRKTCYLIVEHSWFESFIVFMILLSSGALAFEDFYLDQKPTVKALLEYTD
RMFTFIFVFEMLLKWVAYGFKNYFTNAWCWLDFLIVNISLTSLIAKMLQYSDVASIKALR
TLRALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFQKC
INKTSEGFLLVPWTTVNNMSDCERQNHTGSFFWVNVKVNFDNVAMGYLALLQVATFKGWM
DIMYAAVDSREVNMQPKWEDNVYMYLYFIIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGG
QDIFMTEEQKKYYNALKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDIIIMALICLNM
ITMMVETDEQSKEKTKILNKINQFFVAVFTGECVMKMFALRHYYFTNGWNVFDFIVVVLS
IGSLVFSAILTSLGNLFSPTLFRVVRLARIGRILRLIRGARGIRTLLFALMMSLPALFNI
GLLLFLVMFIYSIFGMANFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPI
LNTGPPYCDPNLPNSNGTRGNCGNPVVGILFFTTYIIISFLIVVNMYIAVILENFNVATE
QSTEPLSEDDFDMFYETWEKFDPEATQFITFSALSDFADMLSGPLRIPKPNGNILIQMDL
PLVPGDKIHCLDILFTFTKNVLGESGELDSLKANMEEKFMTTNLSKASYEPIATTLRWKQ
EDISATVIQKAYRSYVLQRSMTIANPPPVPRAEEEAVPLPDESFVAFVANENCVLPDKSE
TASATSFPPSYDSVTRGLSDQST
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atggacttcccctttgggtctctggaaactaccaacttccatcgattcaccccagagtct
ctggtggagattgaaaaacgaattgctgctaagcaggaggcagagaaagcaaaaaagaag
tccaagaaacagaaggaccacgaagagaagcctcggccccagcttgacttgaaagcgtgc
aaccagctgcccaagttctatggcgagctcccagcagagctggtcggagagccactggag
gatctggaccccttctacagcacacaccggacatttatggtgctgaacaaagggaggacc
atttcccggtttagtgccactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtccgtccactcatatcctttatggttcagtttatttataacc
ctcactattttggtcaattgtgtgggcatgacccaaaccgaacttccagagagaatggag
tatgtcttcactgtcatttatacctttgaagccttgataaagatactggcaagaggattt
tgtctaaatgagttcacttacctgcgagatccttggaactggctggattttagtgtcatc
accctggcgtatgttggtgaagccgtagatctccgagggatctcaggcctgcggacgttc
agagtccttagagctttaaaaacagtatctgtgattccagggctgaaggtcatcgtggga
gccctgatccactcggtgaggaagctggctgatgtgaccatcctcaccatcttctgcctg
agtgtctttgccctggtgggcctgcagctcttcaagggcaacctcaagaacaaatgtgtc
aagaattgcacagttgtcaacgagacggccaattactcttctcatgaaaaacgggagtgg
aatttctgtcatagggacccagatttctacaccaacaaaccaggcacttctgatccctta
ctgtgtggcaatggatctgattcaggccactgccctgaaggttatttctgccttaaaaca
tctgacaacccagattttaactataccagttttgactcctttgcttgggctttcctctca
ctgttccgcctcatgacacaggattcctgggaacgcctctaccagcagaccctgagggct
tctgggaaaatctatatgttttttttcgtgcttgttatcttcctggggtctttctacctg
gtcaatttggtcttggctgtggtcaccatggcatatgaggagcagaaccaggcaaccatt
gatgaaattgaagccaaggagaagaagttccaggaggcccttgagatgctccggacagag
caggaggtgctggcagccctgggggttgacacagcctctctccactcccacaatggatcc
cctttggcctccaaaaatgccagtgtgagaaggcacagaatgaagccaagggtgtcagag
ggctccacagacgacaacaagtcaccccagactgagtcttacaacgagcacagaatgtct
ttcctaggcctcacctctgggagacaccaggctagccttggcagtgtgttccatttccag
gcccctggccgagacatctcattccctgatggggtcacagatgatggagtctttcctgga
gaccgtgaaagccatcgggggtctctgctgctgggcagggatgcaagccagcaagacccc
ctccctaggagtccactgcctcaaactcccaaccctggcttagggcgtggagaagatgga
ctccccacattgcccactggtgagcttgcccctggagccatcgaagtctcggcatctgat
gcaggacagaagacttacttgacagcagaatacttgaacaaacctttccgagcccaaagg
gcaatgagtgttgtcagtatcatgacctctgtcctcgaggatctcgaggagtctaaacag
aggtgcccaccctgcttgaccagcttggctcagaaatatctgatctgggattgctgccca
acgtgggtgaagcttaagacccttctcttcgcgattgtgacggacccctttgcagagctc
acaatcaccctgtgcattgtggtgaacaccatcttcatggccatggagcactacggcatg
agtcctgctttcgaagccatgctccagattggcaacattgtctttaccgtgttttttact
gctgaaatggtcttcaaaatcatagcgttcgatccctactattacttccagaagaagtgg
aacgtctttgactgcatcatcgtcacagtgagcctgatagagctggctgcggtcaggaag
gggagcctgacggtgctgcggaccttccgcctgctgcgggtcttcaagctggccaagtca
tggccgaccttaaacacgctcatcaagatcatcggcaactcggtgggggctctggggaac
ctcaccatcatcctggctatcattgtcttcgtctttgctctggttggcaagcagctcctc
ggggacaacttccgtgacaaccggcgcaaaatctcagcacccaacgaagaatggccacgc
tggcacatgcacgacttcttccactccttcctcatcatctttcggatcctctgtggagag
tggattgagaacatgtgggcttgcatggaagtcggccagaagtccatctgcctcatcctt
ttcttgacggttatggtgctgggcaacctggtggtgcttaacctgttcattgccctgctg
ctgaactccttcagcaccgacaacctcacagccccagaggacgacggggaggtgaacaac
ctgcaggtggccctagcgaggatccaggtgttagtccggtgcaccaagaagaccctttgc
agcttcctcaactggcccttcttgctcccccggcccaaggcagagccccagctggtggtg
aaactcccactctccacctccaaagctgagaaccacattactgctgacactgctgcgggg
agccctggagggcttctgactcccagaggccccagggatgaccacagtgacttcatcacc
aatcctaacatatgggtctctgtgcccattgccgagggcgagtctgacctcgatgacttg
gaggatgatgatgaggaggatgctcagagcacccagaaggaagtgatcccccaagggaag
gagcagctgcaacaagttgggagatatgaggaccacctgccacccaggagctcaggttct
ggaatgtcccctgaggccctggctccatacctaggtgagaagtggaaagacgaggctcct
gctcagggccctacagagggagtggacgacatgagctcctcagaaggcagcaccgtggac
tgccttgatccggaggagatcctgaggaagatccctgagctggcggatgacctcgatgaa
ccagatgactgcttcacagaaggctgcattcgccactgtccctgctgcaaagtgaacagc
tccaagtttccaagggccatgggctggcaggtgcgcaagacctgctacctcatcgtggag
cacagctggttcgagagctttatcgtcttcatgatcctcctcagcagtggagcgctggcc
tttgaagatttctaccttgaccagaagcccacggtgaaggccttgctggagtacaccgac
aggatgttcacgtttatctttgtgtttgagatgctgctcaaatgggtggcctatggcttt
aaaaattacttcaccaatgcctggtgctggctggacttcctcatcgtgaatatctcactg
acaagccttatagcgaagatgctgcagtattctgatgtggcatccatcaaagcccttcgg
accctccgtgccctgcggccactgcgggccctgtctcgatttgaaggcatgcgggtggtg
gtagatgccctggtgggcgccatcccctccatcatgaatgtcctcctcgtctgcctcatc
ttctggctcatcttcagcatcatgggtgtgaacctcttcgcagggaagtttcagaaatgc
atcaacaagaccagtgaaggctttcttcttgtgccttggactactgtgaataacatgtct
gactgtgaacgtcaaaaccacactggaagcttcttttgggtcaatgtgaaggtcaacttt
gataatgttgcaatgggctaccttgcacttctgcaggtggcaacctttaaaggctggatg
gacatcatgtatgcagctgtcgattcccgggaagtgaacatgcagcccaagtgggaggac
aacgtgtacatgtacttgtacttcatcatcttcatcatttttggcggcttcttcacactc
aatctcttcgttggggtcatcattgataacttcaaccaacagaaaaaaaagttagggggc
caggacatcttcatgacagaggagcagaagaagtactacaacgccttgaaaaagctgggc
tccaagaagccccagaagcccatcccacggcccctgaacaagtaccagggctttgtcttt
gacatcgtgaccaggcaaactttcgacatcatcatcatggccctcatctgcctcaacatg
atcaccatgatggtggagactgatgagcagagtaaagaaaagacaaaaatcctaaacaaa
atcaaccagttctttgtggccgtcttcacgggcgagtgtgtcatgaagatgttcgccttg
aggcattactacttcaccaatggctggaatgtgtttgacttcattgtcgtggtcctctcc
attggaagcctggtgttttctgcaattcttacatcacttggaaatttattctccccaacg
cttttccgagtcgtccgcctggcccggatcggccgcatcctcaggctcatccgtggggcc
aggggcatccgcacactgctctttgcactcatgatgtccctgcccgccctcttcaacatt
gggctgctgctcttcctggtcatgttcatctactccatcttcggcatggccaacttcgcc
tacgtcaagtgggaggctggcattgatgacatgttcaactttcagacctttgccaacagc
atgctgtgcctcttccagatcaccacgtcggcaggctgggacgggctcctcagccccatc
ctcaacacggggcctccctactgcgaccccaacctgcccaacagcaacggcaccagaggg
aactgtgggaaccccgttgtgggcatcctcttcttcaccacctacatcatcatctccttc
ctcatcgtggtcaacatgtacatcgcggtgattctggaaaacttcaatgtggccacagag
cagagtacggagcccctgagcgaggatgactttgacatgttctacgagacttgggaaaag
ttcgacccagaggccacccagttcattaccttctctgccctctcagactttgcagacatg
ctctctggccccctgcgaatcccaaaacccaatgggaatatattaatccagatggacttg
cccttggtccctggagataagatccactgtttggacatcctgtttaccttcaccaagaat
gttctgggagaatctggggagttggattctctgaaggcaaatatggaggagaaatttatg
acgactaatctttcaaaagcatcctatgaaccaatagcaaccaccctccggtggaagcaa
gaagacatttcagccactgtcatccaaaaggcctatcgcagctatgtgctgcagcgctcc
atgacgatcgccaatcccccgcctgtgcccagggctgaggaggaggctgtgccactgcca
gatgaaagctttgttgcattcgtggcaaatgaaaactgtgtgctcccagacaaatctgaa
actgcctctgccacatctttcccaccatcctacgacagtgtcactagaggccttagtgat
caatcaacttaa
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