Physeter macrocephalus (sperm whale): 102991341 Help Entry 102991341         CDS       T06011                                  Symbol SSPOP Name (RefSeq) LOW QUALITY PROTEIN: SCO-spondin   KO K24434   SCO-spondin Organism pcad  Physeter macrocephalus (sperm whale) Brite KEGG Orthology (KO) [BR:pcad00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:pcad04990]     102991341 (SSPOP) Domain-containing proteins not elsewhere classified [BR:pcad04990]  Thrombospondin domain-containing proteins   Other thrombospondin domain-containing proteins    102991341 (SSPOP) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWD C8 TSP_1 TIL TSP1_spondin Ldl_recept_a VWF Pacifastin_I Motif Other DBs NCBI-GeneID:  102991341 NCBI-ProteinID:  XP_054940675 UniProt:  A0A9W2WNW3 LinkDB All DBs Position 5:complement(6738275..6765163) Genome browser AA seq 2603 aa AA seqDB search MLLPALLSGTAWALANGRWCERTETILVEEEGSPRQEDLVTRLNVAGHSQGWGXTLTSSP LPLPGGPRAPETRPAAWNLTVRACCPGWGGTHCTLALAEASLEGRCFATWLCQPRAGSAN ASVGSLEECCAWPWGHSWRDGRSQPCHSRSSHKLPGGSTDPPAGKAAAQDVCHQLLHGPC REGHAQVPPAEYHEACLFAYCAAAPAGSGREERLEAACPTLASYAQDCAARRIHVRWRKP GFCGRAPASPVPGGRLCSDCASACPPRCSAVGEWGEGSCGEECVSGCECPPGLFWDCALC VPAARWPCYHRRRRYGPGDTVRQLRSPRVGQDGRWLCAQAPCPAEAAVGGAGHYLTFDGR SFSFRGRTGRRFSLVQDFVKRQLLSVLEHGDCNAGSRLHAISVSLGDTHVQLRDSGAVLV DGQDVVLPWSSTGGLSVSHTSSTFLLLRWPGARVLWGASDPAAYITLDPRHALQVAWNQQ DDFLTPAGDVETSIAAFASKFQVAGEGRCPSEGSAPLSRCSTHTQRHIFAGAACAILHGP VFQACHGLVDRRXFHLRCLTAVCGCTPGRDCLCPVLAAYARRRAQGGGLLSWRDQTLCPV LRPGGQEYQGCAPVCGRSCGETGGCGELGSCVAGCNCPLGLLWDPEGRCVPRGSCSCQLG AHGYAPGSATLKDCDRCICQERGLWNCTAQRCAPPRAFCLRGLVYVPGASVLTCDSPSAS GSCPPGSMGGCVCPPGTVLLDEGCIPPELCPCRHRGQWYPPNAAVQEDYNIWACQGRQWR CMGQRCDGRCQASGDPHYVTFDGLALTFPGACEYLLVREASSRFTVSAQDVPCGASGLTC TKVLTVRLQSTVVDMLRGQAVTVNGVSVTPPKVYTGSGAEAAPCWPLSALTTCLGLTLLW DGGTRVLVQLSPELRGRVAGLCGDFGGDASNDFRSRQGVLLDPTAELAAHAWCLNPXPPP CAVNAHRAGWARAHCGVMLQPLFARCHAEGPPEQHCEWCVHDTRGGDSGGACECLCSAIA TYAXECSGGIHVRWRSRDLCPLQCEGGQGYEACGPXCVPPLTCHDHGPEPGWHCQAVARV EGCFCPEWTLLHXGVCLEPASCPCEWRGSFFPPGTVLQKDRGNCTCQESQWLCGDGGSRG EEPVPGCAEGEAPCQESGHCVPHGWLCDCGEGSDEEGCATPGRGEGQVSCSSGHCLPLAL ICDGQDGCGDGTDEQGCLCPXDSLACADGRCLPPALLCDRHPDCRGAADEECCRGQVNCT PGGVSCVDGAGVGXRICACPGGADEGPGHCPLPQLVGGRRGLEGERSRRRWKGPAACRHP RGGGRGAPGWGADAPAAPPCGLFASGGSGEGGPRGWRCDGEEDRAGGGDESGPLCVAPAQ LSPRLGRGARRLRPRAQRAGRPLLPPPPDGPPPPVGFASYTPPMPSAPPPASAGSTQLPP PPRRSLCPCGLAPQLCLNPGRLCDGLPAQSPGAAALPGPRAPDSGLLHGRLPRGTVLPGD PPSARQTRALGWTPWGPRSACSRSSLVPGGDPGWHSRSWLCPSPGDTSCPGEATQEEPCS PSVCPAPGVWGLWATWPTCSAPCDGGVQTLGHSFSASAPGGPGCQGPHRQTRDCNMQPCT AQCPGDMVFRSAEQCHQEGGPRPRLCLAQGPGVECTSVCTPGCTCPPGLFLHDASCLPLS QCPCQLCGQLYAPGAVAQLGSCNNCTRISGEMVCTSEPCPVACGXSPWTPWSLCXRSCNV GVRRHFRAGTAPPAAFGGTACQGPNMEAEFCGLGPCGCPGGEWGPWSPCSVPCGGGYRNC TRGSGGPSPVDFSTCSLQPCADEGPVPAVCPPGKQWLDCAQGPASCAELSAPRGTDQPCR PGCCCTSGTLLLERSCVPTASRLQGLGAAGADPGAQLSILGEGGQPLGPGDELGSGQTLH TGCSNRSCAHGKLSCSVGHCSKAGLGFGPWGPWGPCFRSCGGXGTRTCNCHCARPTPTPG GQHCRGPRQDLEYRLRPDCPGTAGSTVEPVTGLPGGWGLWSPWSPCSSSCTDPAHPAWCS RTRLCLANCAGGASSQERPCNLPSCTELPLCPGPGCVAGSCSWTAWAPWEPCSRRRGLGQ QCRMQAYHPPGPGGHXGPDILTAYQERRFCNLRACPVPGGRSRWSPWSWCDRSCGGGRSL RSRSCSSPPPKNGGAPCVGERHHAWLCNPTALWYDTGSPQGPMFPWAPTRRKDGLYSFTE RRAAQQAWRWSTVPAAAPPLLRPPGEDRVSGRPGRGGTPCLGPSTQTQRCGQQPCLGPLD ACSWGPWGPCSRSXGPGLASRSGSRPCPLAKADPTCLLHRPCLVWSLEECVWSSWTRYSR QVPVQQRYRPQGPPPAGGPCTRLDGHFRPRLISNCSGAAGAGWRPHSPGAVELPAHLRRR SCADLWDRVQCLQGRCHPGCRCPPGQLVQDARRVPMSSCRCGLPSPSASWVLAPSERGGL DCKNCPCVDGSLVCRPHECPALGPWAAWGSCSAPCGGXATQRRGSCREGPAGAPCPAQDT EQRQGCDLQPCPGRPPGRVLSPCASSCPRLCSHLQPGTLCMQEPCQLGRDCPGGPIPLGL TAPPFVIAHLPLICPLGGDFSKR NT seq 7812 nt NT seq  +upstreamnt  +downstreamnt atgctgctccctgccctcctctctgggacggcatgggcactggctaatgggcggtggtgt gagcggacagagaccatcctggtggaggaggaaggaagtccccgtcaggaggacctggtg accagactgaacgtcgcaggccattcccagggatggggctgaacactaacatcttctccc ctccccctacctggtggacccagggccccggaaaccaggcctgctgcatggaacctgacc gtgagggcttgctgcccaggctgggggggcacccactgcaccctggcccttgccgaagcc agccttgagggccgctgctttgccacatggctgtgccagccgagggcaggctcagctaac gcttctgtgggaagcctggaggagtgctgtgcctggccttggggacacagctggcgggat ggccgctcccagccctgccacagccgctccagccacaaactccccggtgggtccacagac ccacctgcgggaaaggctgcagcccaggatgtgtgccatcagctgctgcacggtccatgc agggaaggccatgcccaggtgccccctgctgagtaccacgaggcctgcctctttgcctac tgtgctgcggccccagcgggcagtgggcgggaggagcggctggaggccgcgtgccccacc ttggccagctacgcccaggattgtgcggcgcggcgcatccacgtgcgctggaggaagccc ggcttctgcggtagggctcccgcctcgcctgtgcctgggggccggctgtgctcggactgc gcctcggcctgtccgcccagatgctcggcagtgggcgagtggggcgaggggtcctgcggg gaagagtgcgtgagcggctgcgagtgtccgcccggcctcttctgggactgcgccctctgt gtgcctgccgcccgctggccctgctaccaccgacgccggcgctacggccccggtgacacc gtgcgccagctgcgcagcccgcgcgttggccaggacggccgctggctctgcgcgcaggcg ccgtgccccgccgaggccgcggtgggcggggccgggcattacctcaccttcgatgggcgg agcttttccttccgcggccgcacgggtcgccgcttcagcctggtgcaggacttcgtaaag aggcagctactgagtgtactggagcacggggactgcaacgctgggagccgcctccacgcc atctcggtctccctgggggacacccacgtccagctcagggactcaggagcagtactggtg gacgggcaggatgtggtcttgccctggagcagcactgggggcctcagcgtctcccacacc tcttccactttcctgctgctgcgctggcctggggcccgcgtcctctggggagcgtctgac cctgcagcctacatcaccctggacccccgccatgccctccaggtggcctggaaccagcag gatgacttcctgactcctgctggcgacgtggagaccagcattgccgcctttgctagcaag ttccaagtggcaggcgagggaaggtgcccctcggagggcagcgccccactttcccgctgc agcacccacactcagcgtcacattttcgcgggggcagcctgtgccatcttgcatggccca gtcttccaggcgtgccacgggctggtggacaggcgcncgttccacctgcgctgcctgacc gctgtgtgtggctgcacccccggcagggactgcctgtgccccgtgctcgctgcctatgct cggcgccgtgcccaggggggtggcctgctttcctggagagaccagaccctctgccctgtc ctgcgtcctggtggccaggagtaccaggggtgtgccccagtgtgtggtcggagctgtggg gagactggaggctgtggggagctgggcagctgtgtggccggttgtaattgccccctgggg ctgctttgggaccctgagggccggtgtgtgccccgcggctcatgctcctgccagcttggg gcccatggctatgcccctggcagtgctaccctgaaggactgcgaccgctgcatctgccag gagaggggcctatggaattgcactgctcaacgctgcgccccaccacgggcattctgcctc cgtgggctcgtctacgtccctggtgcctccgtcctcacctgtgacagccccagtgccagt ggctcctgccccccaggcagcatggggggctgtgtctgtcccccaggaaccgtgctgctg gatgagggctgcatacctcccgagctctgtccctgccgtcaccgtgggcagtggtacccg cccaacgctgcagtgcaggaggactacaacatttgggcgtgccagggtcggcagtggcgc tgcatgggccagcggtgcgatggacggtgccaggcatcaggcgacccccactatgtgaca ttcgatgggctggccctcaccttccccggggcctgcgagtatctgctggtgcgagaggcc agcagccgtttcacagtctctgcccaggacgtgccctgcggggccagcggcctcacctgc accaaggtgctgaccgtgcggctgcagagcaccgttgtggacatgctgagaggccaggca gtgacagtgaatggggtgagtgtaacgccccccaaggtctacacgggctccggggctgag gctgcgccgtgctggcctctctctgctctcaccacctgcctgggcctcaccctgctctgg gatggaggcacccgggtcctggtgcagctgtcccccgagctccgcggccgggtggctggg ctgtgtggagactttggtggagacgccagtaatgactttcggagccgccagggagtcctg ctggaccccacggctgaactggctgcccacgcctggtgcctcaatcctnngccgcccccc tgcgccgtgaacgcccaccgggccggctgggcccgcgcccactgcggggtgatgctgcag ccgctctttgcccggtgccacgcggaggggcccccagagcagcactgcgagtggtgtgtg catgacacccgcggaggtgattcagggggcgcctgtgagtgtctctgctcggccatcgcc acctacgcangcgagtgttccggcgggatccacgtgcgctggcgcagccgggacctctgc cctctgcagtgtgaagggggccaggggtatgaggcctgtggccccnnatgcgtccccccc ctcacctgccacgaccacggtcctgagcctgggtggcactgccaggccgttgcccgtgtg gagggctgcttctgtcctgagtggactctgctgcactgaggagtctgcctcgagccggct tcctgcccctgcgagtggcgaggcagcttcttccccccgggcaccgtactgcagaaagac cgtggcaactgcacgtgccaggaaagccagtggctttgtggggatggcggtagccgcggt gaggagccggtgcctggctgtgccgagggggaggccccgtgccaggagagcgggcactgt gtgccccacgggtggctttgtgactgtggcgagggctcagacgaggagggctgtgccacc ccaggccgtggggaggggcaggtgtcttgcagctccggccactgcctgcccctggccctg atctgtgatgggcaggacggctgtggagacgggacggatgagcagggctgcctgtgcccc naggactcgctggcctgtgccgacggccgctgcctgccccccgccctgctctgcgatcgg caccctgactgtcggggcgctgctgacgaggagtgctgtcgcgggcaagtgaactgcacc cctgggggggtgtcgtgcgtcgatggtgccggcgtggggnaccgaatctgcgcctgccca ggtggagccgacgaggggcctgggcactgcccgctcccccagctggtagggggccggagg ggcctggagggggagcggagccggaggcggtggaagggcccggcggcctgcaggcatccc cggggcgggggccggggggcgccggggtggggcgcggacgcccccgcagcgccgccctgc ggcctcttcgcgagcggcggcagcggcgagggcggcccgcggggctggcgctgcgacggc gaggaggaccgcgccggcggcggcgacgagagcggcccgctctgtgtggcccccgcgcag ctgtccccacggctcggacggggagcccggcgcctgcggccacgcgcccagcgggcgggg cgccctctcctcccgcccccacccgacggacctccgccgcctgtgggttttgcctcatac acccctcccatgccttcggctcccccgcccgcctctgcgggctccacccagctgcccccc ccaccccgccgcagcctctgcccctgtggtttggctccccagctgtgcctgaaccctggg cggctctgcgacgggctccccgcccagtctcccggtgctgcggcgctgcccgggccccga gcaccagactcaggcctgcttcacggccgcctgcccaggggcaccgtgctgcctggggac cctcccagcgcccgccagaccagggcgctgggctggacaccctggggtccccggtccgcc tgctcccggagctccctagtccctggaggggatccaggctggcacagccgttcctggctc tgccccagccctggggacacgtcctgcccaggagaggccacccaggaggagccctgcagc ccctctgtgtgcccagcacccggcgtctggggtctgtgggccacctggcccacctgctcg gcgccctgcgatggaggcgtccagacactcgggcacagcttctctgcctcagctcctggg ggccccgggtgccagggaccccacagacagaccagggactgcaacatgcagccctgcaca gcccagtgcccaggcgacatggtgttccgctcagctgagcagtgccaccaggaggggggc ccacgccctcggctgtgcctggcgcagggccctggggtggagtgcaccagcgtctgcacc cctggctgcacctgtccccctggcctcttcctgcacgacgccagctgcctgcccctgagt cagtgcccctgccagctgtgcgggcagctctatgcacctggagcagtggcccagctgggc tcctgcaataactgcacccgtatctctggtgagatggtgtgcacctcggagccctgccca gtcgcctgtggctagagcccctggaccccgtggagtctctgcnagcgcagctgcaacgtg ggtgtccggcggcacttccgggcaggcactgcgccccctgctgccttcggggggactgcg tgccagggtcccaacatggaggctgaattctgcggcctggggccatgtggatgtcccggt ggggagtggggcccctggtctccgtgctccgtgccctgcgggggtggctaccggaattgc acccgagggagcggtgggcccagccccgtggacttctccacctgtagcctgcagccctgt gcagatgaggggccagtgcctgctgtgtgtcccccgggcaagcagtggctggactgtgca cagggccctgcttcctgtgcagagctcagtgccccgagagggactgaccagccctgccgc cctggctgctgctgcacgtccgggacgcttcttctggagcgctcctgtgtgccgactgcc tcacggctgcaggggctgggagctgccggcgctgacccgggggctcagctgtccattctg ggagaggggggtcagccccttgggcctggagatgagttgggctcaggtcagaccctccat acaggctgcagcaaccgctcctgtgcacacgggaagctgtcctgctccgtgggtcactgc tccaaggctgggcttggctttggcccctggggcccgtggggcccctgcttccgctcctgt ggcgggnctggcacccgcacctgcaactgccactgtgcacgccccacgcccactcccggt ggccagcactgccgtgggccccgccaggacctcgagtaccgcctccgcccagactgccca gggactgcagggtccacggtggaaccagtgacaggccttccaggtggctggggcctgtgg tccccgtggtccccctgctccagcagctgcacagaccccgctcaccctgcttggtgcagc cgcacccgcctctgcctggcgaactgcgccgggggggcctcctcccaggagcgcccttgc aacctgccctcctgcacagagctgcccctgtgccctggccctggctgcgtggccgggagc tgttcctggactgcctgggccccgtgggaaccttgctcccgcagacgtgggctgggccag cagtgccgcatgcaggcctaccatcccccagggcccggcgggcactgaggccccgacatc cttacggcctaccaggagcgccgcttctgcaacctgcgagcttgcccagtgcctggaggc aggtcacgctggagcccctggtcctggtgtgaccggagctgcggagggggccggtccctg aggagccgcagctgctcgagccccccacccaagaacgggggtgccccctgtgttggggag aggcaccacgcatggctctgcaatcccacggccctgtggtatgacactgggtctccccag ggtcccatgtttccatgggcaccaacccggaggaaggacgggttgtacagcttcacggag aggagggccgcccagcaggcatggaggtggtcgaccgtgccagccgctgccccgccgctg ctcagacctccaggagaggatcgcgtgtcaggacgaccaggccgagggggcaccccctgc ctgggccccagcacccagacccagcgctgtgggcagcagccttgcctggggccgctggac gcctgctcctggggcccttgggggccctgctcccgcagctgaggcccaggcctggcctcc cgctctgggtcccgcccctgcccgctggccaaggccgaccccacctgcctgctccacagg ccctgcctggtttggtctctagaggagtgcgtgtggagcagctggacgcgatactcacgc caggtgccggtccagcagcgctaccgaccccagggcccaccgcccgcagggggcccctgc acacgactggacggccacttccggcctcgcctcatcagcaactgctctggggctgctggc gcaggctggaggccgcattcccccggagcggtggagctgccagcacatctcaggagaagg agctgtgccgacctctgggaccgcgtgcagtgtctgcagggacggtgccacccaggctgc cgctgtccccctggccagctggtacaggatgcgcgccgtgtgcccatgtcttcttgccgc tgtggcctccccagccccagtgcttcatgggtgctggctccgtccgagcgggggggtctg gactgcaaaaactgcccctgtgttgacgggtccctggtgtgccgcccccatgagtgtcca gccctcgggccttgggcagcctggggcagctgctctgctccctgtggtggangcgccacc cagagacgtgggagctgcagggaaggtcctgcgggggcaccgtgcccggcccaggacacg gagcaacggcagggctgtgacctgcagccctgccccgggcgcccacctggccgggtgctc agcccctgtgcatcctcgtgcccgcgcctctgctcgcatctgcagcctggcaccctctgc atgcaggaaccctgccagcttggccgtgactgccctggaggccccatccctttgggcctg accgctccgccctttgtgatagcgcatctcccgctcatttgtcctctgggcggtgatttc tcaaagcgctga

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