KEGG   Physeter macrocephalus (sperm whale): 102991367
Entry
102991367         CDS       T06011                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad03082  ATP-dependent chromatin remodeling
pcad03083  Polycomb repressive complex
pcad04110  Cell cycle
pcad04213  Longevity regulating pathway - multiple species
pcad04330  Notch signaling pathway
pcad04350  TGF-beta signaling pathway
pcad04613  Neutrophil extracellular trap formation
pcad04919  Thyroid hormone signaling pathway
pcad05016  Huntington disease
pcad05031  Amphetamine addiction
pcad05034  Alcoholism
pcad05165  Human papillomavirus infection
pcad05169  Epstein-Barr virus infection
pcad05200  Pathways in cancer
pcad05202  Transcriptional misregulation in cancer
pcad05203  Viral carcinogenesis
pcad05206  MicroRNAs in cancer
pcad05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102991367 (HDAC1)
   03083 Polycomb repressive complex
    102991367 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    102991367 (HDAC1)
   04350 TGF-beta signaling pathway
    102991367 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    102991367 (HDAC1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    102991367 (HDAC1)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    102991367 (HDAC1)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    102991367 (HDAC1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102991367 (HDAC1)
   05202 Transcriptional misregulation in cancer
    102991367 (HDAC1)
   05206 MicroRNAs in cancer
    102991367 (HDAC1)
   05203 Viral carcinogenesis
    102991367 (HDAC1)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    102991367 (HDAC1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    102991367 (HDAC1)
   05165 Human papillomavirus infection
    102991367 (HDAC1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    102991367 (HDAC1)
  09165 Substance dependence
   05031 Amphetamine addiction
    102991367 (HDAC1)
   05034 Alcoholism
    102991367 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pcad03036]
    102991367 (HDAC1)
Enzymes [BR:pcad01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     102991367 (HDAC1)
Chromosome and associated proteins [BR:pcad03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     102991367 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     102991367 (HDAC1)
    BRAF-HDAC complex
     102991367 (HDAC1)
    REST complex
     102991367 (HDAC1)
    SHIP complex
     102991367 (HDAC1)
    MiDAC complex
     102991367 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     102991367 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102991367 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    102991367 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl SAE2 RNA_polI_A34
Other DBs
NCBI-GeneID: 102991367
NCBI-ProteinID: XP_028341677
Ensembl: ENSPCTG00005015262
UniProt: A0A455AYQ7
LinkDB
Position
Unknown
AA seq 422 aa
MFFQVNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGD
RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP
YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAI
PEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGEGGRKNSSNFKKAKRVKTEDEK
EKDPEEKKGSRRRSSWPEQTSPLQFWLLAKFPTFIPQPLRFYIFYFSVYLYKNILNINIP
RD
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgttttttcaagttaacgttggtgaggactgtccggtatttgatggcctctttgagttc
tgtcagctatctactggtggctctgtggcaagtgccgtgaaacttaataagcagcagacg
gacatcgctgtgaattgggctgggggcctacaccatgcaaagaagtccgaggcatctggc
ttctgttacgtcaatgatatcgtcttggccatcctggaactgctaaagtatcaccagagg
gtgctgtatattgacattgatattcaccacggcgatggcgtggaagaggccttctatacc
acagaccgagtcatgactgtgtcctttcataaatatggagagtacttcccaggaactggg
gacctacgggatatcggggctggcaaaggcaagtattatgctgttaactacccgctccga
gatgggattgatgacgagtcctatgaggccattttcaagccggtcatgtccaaagtaatg
gagatgttccagcccagtgcagtcgtcttacagtgtggctctgactccttgtctggtgat
cggttaggttgcttcaacttgaccatcaaagggcacgccaagtgtgtggaatttgtgaag
agcttcaacctgcctatgctgatgctgggaggaggtggctacaccattcgtaatgtcgcc
cggtgctggacgtacgaaacagctgtggccctggacacggagatccctaatgagcttcca
tacaacgactacttcgaatactttggaccagatttcaaacttcacatcagcccttccaat
atgactaaccagaacactaatgagtacctggaaaagatcaaacagcgactgtttgagaac
ctgagaatgctgccccatgcacctggggtccaaatgcaggccattcctgaggatgccatt
ccagaggagagtggcgatgaggatgaagaagaccctgacaagcgcatttcaatctgttcc
tcggacaaacgaattgcctgtgaggaagagttctccgactctgacgaggagggagaaggc
ggtcgcaagaactcttccaacttcaaaaaagccaagagagtcaaaacagaagacgagaaa
gagaaagacccagaagagaagaaagggtcaaggaggaggtcaagttggcctgaacagacc
tctcctctccagttctggcttcttgccaagttccccacctttatcccacaacccctcaga
ttttatattttctatttctctgtgtatttatataaaaatatattaaatataaatatcccc
agggactag

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