Physeter macrocephalus (sperm whale): 102991448
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Entry
102991448 CDS
T06011
Symbol
NUP88
Name
(RefSeq) nuclear pore complex protein Nup88 isoform X1
KO
K14318
nuclear pore complex protein Nup88
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03013
Nucleocytoplasmic transport
pcad05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102991448 (NUP88)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102991448 (NUP88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102991448 (NUP88)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102991448 (NUP88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
DUF659
DUF7344
Motif
Other DBs
NCBI-GeneID:
102991448
NCBI-ProteinID:
XP_007102878
Ensembl:
ENSPCTG00005019412
UniProt:
A0A2Y9EI73
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All DBs
Position
14:complement(90120069..90150431)
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AA seq
743 aa
AA seq
DB search
MAAAEGAAGDGELWQAWLPDHAVFLRLQEGRKNQSPAAAEKPASSSLPSPPPLPPQLLTR
NLVLGLGGELFIWDGEGSSFFVVRLRDPSGAGEESPLSQYQRLLCINPPLFEIYQVLLSP
TQHHVALIGIKGLMILELPKRWGKNSEFEGGKSTVNCSTTPVAERFFTSSTSLTLKHAAW
YPSEMLDPHIVLLTSDNVIRIYSLREPQTPTKVIVLSEAEEESLILNKGRAYTASLGETA
VAFDFGPLSAVPKNIFGQKGKDEVLAYPLYILYENGETFLIYVSLLHSPGSVGKLLGPLP
MHPAAEDNYGYDACAVLCLPCVPNILVIATESGMLYHCVVLEGEEEDDQTSEKSWDSRAD
LIPSLYVFECVELELALKLASGEDEPFDSDFSCPIKLHRDPKCPSRYHCTHEAGVHSVGL
TWIHKLHKFLGSDEEDKDSLQELATEQKCFVEHILCTKPLPCRQPAPIRGFWIVPDILGP
TMICITSNYECLIRPLLSTVHPASPPLLCTREDVEVAESPLRILAETPDSFEKHIRSILQ
RSVANPAFLKSSEKDTAPPPEECLQLISRATQVFREQYILKQDLAKEEIQRRVKLLCDQK
KKQLEDLNYCREERKSLREMAERLADKYEEAKEKQEDIMTRMRKVLHSFHSQLPVLSDSE
RDMKKELQLIPDQLRHLGNAIKQVTMKKDYQQRKMEKVLSPQKPTITLSAYQRKCIQSIL
KEEGEHIREMVKQINDIRNHVNF
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgaaggagccgcgggagacggtgagctgtggcaggcctggctccccgac
catgccgtgttcttgcggctccaggaaggacggaaaaaccagagcccagccgcagccgag
aagccggcttcttcatcattgccttcgccgccgcccctgccgccgcagttgctgacgaga
aacctggtcttgggcctcggcggagagctcttcatatgggacggagaaggcagctccttc
ttcgtcgtgcgccttcgggaccccagcggcgccggtgaggagtcccccctctcccagtac
cagagactgctttgcataaatccacccctgtttgaaatctatcaagtcttgttaagtcca
acacaacatcatgtagcacttataggaataaaaggacttatgatattagaattacctaaa
aggtgggggaagaattctgaatttgaaggtggaaaatcaacagtgaattgtagcaccact
cccgttgctgagagatttttcaccagttctacctctctgactctaaagcatgctgcctgg
tatccgagtgagatgctggacccccacatagtgctgttaacatcagacaatgtaataaga
atttactctctacgtgagccccagacacccactaaggtcattgtactttcagaagcagaa
gaggaaagtctaatactcaataaaggaagggcctacaccgcatctctaggagagacagca
gttgcatttgactttgggccgttgtcggcagtcccgaagaacatatttggacaaaaaggc
aaagatgaagtattggcttaccccctgtacatcttatatgagaatggggagactttcctt
atatatgttagtctgttgcacagccctgggagtgtgggaaagctgttaggcccattgccc
atgcatcctgcagctgaagataactatggttatgatgcttgtgctgtactctgcttacca
tgtgtccccaacatcttggtgattgctactgaatcaggaatgctgtatcactgtgttgtg
ctggaaggggaagaagaagatgaccagacatcagaaaagtcctgggactccagggcagac
ctcattccttctctgtatgtgtttgagtgcgtggagttggagcttgccctgaaactggca
tccggagaggacgagccctttgattctgacttttcttgtccaatcaaacttcacagagat
cccaagtgtccctcaagatatcactgtactcatgaagctggtgtacatagtgttgggcta
acttggattcataaacttcacaaatttcttggatcggatgaagaagataaggacagttta
caggaactagctacagaacagaaatgctttgtagaacacattctttgtacgaagccattg
ccatgcaggcagccagctccgattcgagggttctggattgtccctgacattctggggcct
accatgatctgcatcaccagtaactacgaatgcctcataaggcctttactaagcacagtc
catccagcgtctcctcccctgctttgtacccgagaggatgttgaagtggcagagtctccc
ctccgtattctggctgaaaccccggactcctttgaaaaacatattagaagcattctgcaa
cgtagtgttgcaaacccagcatttttgaaatcatctgaaaaagatacggctcctcctcct
gaagaatgccttcagctcatcagcagagccacccaggtgttcagagaacagtacattctt
aaacaggacctggcaaaggaggagattcagcggagggtcaaattgttatgtgaccaaaaa
aagaaacaactagaagatctcaattattgtcgagaggagaggaaaagtctgcgggaaatg
gccgagcgcttagctgacaaatatgaggaagccaaggaaaaacaagaagacatcatgacc
aggatgagaaaagtacttcacagttttcactctcagctcccagttctctctgacagtgag
agagacatgaagaaagaattacagctgatacccgatcagcttcgacatttgggcaatgcc
atcaaacaggttactatgaaaaaagactatcaacaacgaaagatggaaaaggtactaagt
cctcagaagcccaccattactctcagcgcctaccagcgaaaatgcattcagtccatcctg
aaggaggagggtgagcacataagagaaatggtgaagcagattaacgatatccgaaatcat
gtaaacttctga
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