KEGG   Physeter macrocephalus (sperm whale): 102991669
Entry
102991669         CDS       T06011                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pcad  Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pcad03036]
    102991669 (KDM4B)
Enzymes [BR:pcad01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     102991669 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     102991669 (KDM4B)
Chromosome and associated proteins [BR:pcad03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102991669 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 PHD Tudor_3 LBR_tudor DUF7141
Other DBs
NCBI-GeneID: 102991669
NCBI-ProteinID: XP_028355981
Ensembl: ENSPCTG00005014205
UniProt: A0A455CB83
LinkDB
Position
2:20662242..20750879
AA seq 966 aa
MVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKR
LERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAG
FNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVKISMDVFVRILQPERYELWKQGKDL
PVLDHTRPTALSSPELSTWSASRASLKARLLRRQISLKENRHWKKTEEERKPSLERKKEQ
TRRPGLSSHRKRSQPKKPKPDDPKSPGEGAAGTALLEEAGGGMKEEATPEADPEEEEEES
QPLPQGREAEGSEEDGRGKLRPAKAKSDRKKKSYGPHSSGPHLHHPLMPQLPPPPPTQFP
SEEVPLLEIPALATGPEAAEENPPPPPLNVVPPGAPSEEPEVKPRPIIPMLFVVPRPGPA
AGDKGRVSCQQASEHFAQKGPTWKEQVAPMELTGPEEESGAGEVQAPSTFSKLKMEIKKS
RRHPLGRPPTRSPLSVVKQEASSDEEAFPFSGDEDVGDPEALRSLLSLQWKNKAASFQAE
RKFNAAAALTEPYCAICTLFYPYSQSLQTEKETPQASLGEGPSATPPSKSGQKTRPLIPE
MCFTSSGENTEPLPANSYIGDDGTSLLISCAKCCLQVHASCYGIRPELVNEGWTCSRCAA
HAWTAECCLCNLRGGALQMTTDRRWIHVICAIAVPEVRFLNVMERHPVDISAIPEQRWKL
KCVYCRKRMKKVSGACIQCSCEHCSTSFHVTCAHAAGVLMEPDDWPYVVSITCFKHKSGG
HTVQILRAVSLGQVVITKNRNGLYYRCRVIGTTTQTFYEVNFDDGSYSDNLYPESITSRD
CARLGPPPEGEFVELRWTDGNIYRAKFISSVTSHIYQVEFEDGSQLTVKRGDIFTLDEEL
PKRVRSRLSVSTGAPQENVFSGEEVKAAKRPRVGTPRAAEDSGRNPDYPAFMESLLQAQC
WPGAPF
NT seq 2901 nt   +upstreamnt  +downstreamnt
atggtggagcgcgagtgcggcaccatcattgagggcgtcaacaccccctacctgtacttc
ggcatgtggaagaccaccttcgcctggcacacggaggacatggacctgtacagcatcaac
tacctgcacttcggggagcccaagtcctggtacgccatccccccagagcatggcaagcgc
ctggagcgtctggcaatcggcttcttccccgggagctcccagggctgcgatgctttcctt
cggcacaagatgaccctcatctcgcccatcatcctcaagaagtacgggatcccattcagc
cggatcacgcaggaggctggggagttcatgatcacgttcccctacggctaccacgccgga
ttcaaccacggattcaactgcgcggaatctaccaacttcgccaccctgcggtggattgat
tacggcaaggtggccactcagtgcacatgccggaaggacatggtcaagatctccatggac
gtctttgtgcgcatcctgcagccggagcgctacgagctgtggaagcagggcaaggacctc
ccggtgctggaccacacgcggcccacggccctgagcagccccgagctgagcacctggagc
gcctcccgggcctcgctcaaggccaggctgctccgcagacaaattagtctgaaagaaaac
agacactggaaaaagactgaggaggagaggaaaccaagtctagagaggaagaaagagcag
accaggaggccggggctgtcgtctcaccggaagcggagccagcccaagaagcccaagccg
gacgaccccaagtctcctggcgagggggcagctgggacggccctcctggaggaggccggt
ggcggcatgaaggaggaggccacaccagaggccgaccccgaggaggaggaggaggaatcc
cagccgctgccgcagggccgggaggccgagggctccgaagaggacgggaggggcaagctg
cggccggccaaggccaagagcgaccggaagaagaagagctacggccctcatagctcaggc
ccgcacctccaccacccgctcatgccccagctgccgccgcccccgcccacccagttcccc
agcgaggaggtgcccctgctggagatcccggcactggccaccggccctgaggccgccgag
gagaaccccccgcccccgcccctcaacgtggtgccccccggagcacccagcgaggagcca
gaggtgaagccgcgccccatcatccccatgctgttcgtggtgccgcggcccggcccggcg
gcaggcgacaagggccgcgtgtcctgccagcaggcctctgagcactttgcccagaagggc
cccacctggaaggagcaggtggcccccatggagctgacggggcccgaggaggagagcgga
gccggcgaggtgcaggctccgtcgaccttttccaagttgaagatggagatcaagaagagc
cggcgccaccctctgggcaggccacccacccggtccccgctgtccgtggtcaagcaggag
gcctcaagtgacgaggaagccttccctttctccggggacgaggacgtgggtgaccccgag
gccttgaggtctttgctgtccctgcagtggaagaacaaggcggccagcttccaggccgag
aggaagttcaatgcggcggccgccctgacggagccctactgtgccatctgcaccctcttc
tacccgtacagccagtccctacagaccgagaaggagactccccaggcctccctcggggag
ggcccctcggccacaccaccttccaaaagcggtcagaagacgcggccgctgatccctgag
atgtgcttcacctccagcggggagaacacagagccgctccccgccaattcctacatcggc
gacgacgggaccagcctgctgatctcctgtgctaagtgctgcctgcaggtccatgccagt
tgctacggcatccgcccagagctggtcaacgagggctggacgtgttcccggtgcgcggcc
cacgcctggactgcggagtgctgcctgtgcaacctccggggaggcgccctgcagatgacg
actgacaggaggtggatccacgtgatctgcgccatcgccgtcccggaagtgcggttcctg
aacgtgatggagcgccaccccgtggacatcagcgccatccccgagcagcggtggaagctg
aaatgtgtgtactgccggaagcggatgaagaaggtgtcgggcgcctgcatccaatgctcc
tgcgagcactgctccacctccttccacgtgacctgcgcccacgccgctggcgtcctcatg
gagccagacgactggccctacgttgtctccatcacctgcttcaagcacaagtcggggggt
cacactgtccagatcctgagggccgtgtccttagggcaggtggtcatcaccaagaaccgc
aacgggctttactaccggtgccgcgtcatcggcaccaccacgcagaccttctacgaagtg
aactttgacgacgggtcctacagcgataacctgtacccggagagcatcaccagtagagac
tgtgcccggctgggtccgccgcccgagggcgagtttgttgagctccggtggactgatggc
aacatctacagggccaagttcatttcctctgtgaccagtcacatttaccaggtggagttc
gaggatgggtcccagctgacggtgaagcggggtgacatcttcaccctggatgaggagctc
cccaagagggtccggtcccggctgtcggtcagcacgggggccccacaggaaaatgtcttc
tcgggagaagaggtgaaggccgccaagcgcccgcgggtgggcacccctcgcgctgcggag
gactcggggcggaacccggactacccggccttcatggagagcctgctgcaggcgcagtgc
tggcccggagccccgttctag

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