Physeter macrocephalus (sperm whale): 102992016
Help
Entry
102992016 CDS
T06011
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102992016 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcad03036
]
102992016 (MBD4)
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102992016 (MBD4)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
102992016 (MBD4)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102992016 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
102992016
NCBI-ProteinID:
XP_023979758
Ensembl:
ENSPCTG00005005918
UniProt:
A0A2Y9SN63
LinkDB
All DBs
Position
18:8890625..8899186
Genome browser
AA seq
593 aa
AA seq
DB search
MESPSLGDCGADPSVIANQRLVPDRPCDLRQVIVPFRASVSPPVKWERGSRREEDVALGS
DRVGEDDKQMVIKSSSECNPPLREPIASAQCGGSAMTECHKSVPCGWERIVKQRLSGKTA
GRYDVYFISPQGLKFRSKSSLANYLHKSGETSLKPEDFDFTVLHKRSIKSGCKDQSMAAL
PSQLQNESRNSNRSLRTRNRWKKDVVSLPSASLELQDSTELSNFTSIHWLLKEDDGVNDA
DSRKVRKSKRKVTVLKGIQIKKTKTGCRRSLPEPVKSNRKRASVYNKAADAESEPLAQES
QLERTCCVSDARASDKTLTVTSKEERPGKEKSLCSGSDFEQTTSGIINKLRSTEEAGHNK
KCEGTFLESEEIRTKVEVGERKEHLHIDISKGGSEMDNSSQTEKDSTSAKIFQEDAIPQT
QVEKRKTSLYFSSKYNKEALSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLN
RTSGKMAIPVLWQFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIIKFSDEYLTKQ
WRYPIELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENHEKLSLP
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggagagtccgagcctgggggactgcggagctgacccctcggtcatcgccaaccagcgc
ctagtccccgaccggccgtgtgacctccggcaagttattgtcccctttcgggcctcagtt
tcaccacctgtaaaatgggagcgggggagtagaagggaggaagatgttgctctgggatca
gatagagtgggagaagatgacaaacaaatggtgataaaaagcagcagtgagtgtaacccc
ccactacgggaacccattgcttctgctcaatgtggtggtagcgcaatgacagagtgccat
aagtctgtaccatgtggatgggaaagaattgtgaagcaaaggttatctgggaaaacagca
ggaagatacgacgtatatttcatcagcccacagggactgaagttccgatccaaaagttca
cttgctaattatcttcacaaaagtggagagacttctcttaagccagaagattttgatttt
actgtacttcataaaaggagcatcaagtcaggatgtaaagaccaaagcatggcagctctg
ccatcccaactgcaaaacgaaagtagaaattcaaaccggagcctccggacacgaaacagg
tggaaaaaagatgtggtttctttgccaagtgctagtttggaattgcaagatagcacagaa
ctctctaactttacttccattcattggcttttgaaagaagatgatggtgttaatgatgct
gactccagaaaggttagaaagtccaaaagaaaggtgactgttttgaaagggattcaaatt
aagaaaactaaaacagggtgccggaggagtcttccagagcctgttaaaagtaatagaaaa
agagcatctgtgtataataaggcagcagatgctgaaagtgagcctcttgcacaagaaagt
cagcttgagagaacttgctgcgtctctgatgccagagcgagcgacaagaccctcactgtt
accagtaaagaggagaggcctggtaaagaaaaatcactgtgttcaggatcagattttgaa
cagaccacttctggcatcataaacaaattacgttcaaccgaagaagcaggacacaacaag
aagtgtgagggtacctttttagaatctgaggaaataagaaccaaggtagaagttggggaa
aggaaggagcatttgcatattgacatttcaaaaggtggctctgaaatggacaacagctca
caaacggagaaagactctacttctgcgaaaatatttcaagaagacgccatcccacagaca
caagtagaaaaaaggaaaacaagcctgtatttttccagcaaatataacaaagaagctctt
agtcccccacgacgcaaggcctttaagaagtggacacctcctcggtcaccttttaatctt
gtccaagaaacacttttccatgatccatggaagctcctcattgcgactatattcctcaac
cggacctcaggcaaaatggcgatccctgtgctttggcagtttctggagaagtatccttca
gctgaggtagcgagaactgcagactggagagatgtttcagaacttcttaaacctcttggt
ctctacgatcttcgagcaaaaaccattatcaagttctcagatgaatatctgacaaagcag
tggaggtatccgattgagcttcatgggattggcaaatacggcaacgactcttaccgaatt
ttttgtgtcaacgagtggaagcaggtacaccctgaagaccacaagttaaataaataccat
gactggctttgggaaaatcacgaaaaattaagtctaccttaa
DBGET
integrated database retrieval system
