KEGG   Physeter macrocephalus (sperm whale): 102992126
Entry
102992126         CDS       T06011                                 
Symbol
NEDD1
Name
(RefSeq) protein NEDD1 isoform X1
  KO
K16547  protein NEDD1
Organism
pcad  Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pcad03036]
    102992126 (NEDD1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pcad04812]
    102992126 (NEDD1)
Chromosome and associated proteins [BR:pcad03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     102992126 (NEDD1)
   Microtubules and associated factors
    gamma-tubulin ring complex
     102992126 (NEDD1)
Cytoskeleton proteins [BR:pcad04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     102992126 (NEDD1)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WDR55 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_RFWD3 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_IFT122_1st eIF2A Beta-prop_IFT140_1st NBCH_WD40 WD40_like Beta-prop_WDR75_1st Beta-prop_SPT8 KNTC1_N Beta-prop_Vps41 WD_LRWD1 DUF1668 NRBF2
Other DBs
NCBI-GeneID: 102992126
NCBI-ProteinID: XP_023983058
Ensembl: ENSPCTG00005006658
UniProt: A0A2Y9SY07
LinkDB
Position
6:30295170..30339717
AA seq 659 aa
MQENLRFASSGDDVKIWDASSMTLVDKFNPHTSPHGISSVCWSSNNNFLVTASSSGDKIV
VSSCKCKPVPLLELGEGQKQTCVSLNSTSMYLVSGGLNNTVNIWDLKSKRIHRSLKDHKD
EVTCVTYNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHGSNQSVRHLKYSLFKKSLLGS
VSDNGIVTLWDVNSQSPYHNFDSTHKAPGSGICFSPVNELLFVTVGLDKRIILYDTSSKK
LVKTLVADAPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTSVQCIAFQ
YSTVLSKSGLNKGCSNKPTAMNKHTVNVSTASGGVQNSGVVREAATTSIATVLPQPTTAV
VGKGTVAVQDKAGLPRSINTDILSKETESGKTQDFSSFDDTGKSSLGDMFSPIRDDAVVN
KGSDESVGKGDGLDFLPQLNSVFPPRKNPVTSSTSVLHSSPLNVFMGSPGKEENENHDLT
AESKKMYLGKQEPKDSFKQFAKLISGAETGNLNTSPSSNQTRSPEKFEKPEKEIEGQFIY
ELPVNGSSTPNPKIASSVTAGVASSLSEKIADTIGNNRPNAPLTSVQIRFIQNMIQETLD
DFREACHRDIVNLQVEMIKQFHMQLNEMHSLLERYSVNEGLVAEIERLREENKRLRAHF
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgcaggaaaacctcagatttgcttcatcgggagatgatgttaaaatatgggatgcttca
tctatgacattggtggataagttcaacccacacacatcaccacatggaatcagctcagtg
tgttggagcagcaataataactttctagtgacagcatcttccagtggtgacaaaatagtt
gtttcaagttgcaaatgtaaacctgttccacttttagagcttggtgaagggcaaaagcag
acatgtgtcagtttaaattcaacatcaatgtatttggtaagcggaggcctaaataacact
gttaatatttgggatttaaaatcaaaaagaattcatcgatctcttaaggatcataaagat
gaagtaacttgtgtaacatataattggaatgactgctacattgcttctggatctctcagt
ggtgaaattattttgcacagtgtaaccactaatttatctagtactccttttggccatggt
agtaaccagtctgttcggcacttgaagtattccttgtttaagaaatcgctactgggcagt
gtttcggataatggaatagtaactctctgggatgtgaatagtcagagtccataccataac
tttgacagtacacataaagctccaggttcaggcatctgtttttctcctgtcaatgaattg
ctatttgtaactgtaggcttggataaaagaatcattctctatgacacttcaagtaagaag
ctagtgaaaactttagtggctgacgctcctctaactgcagtagatttcatgcctgatgga
gccactttagctattggatcttcccgtgggaaaatatatcaatatgatttaaggatgtta
aaatcaccagttaaaaccatcagtgcacataagacatctgtgcaatgtatagcatttcag
tactccactgtcctttctaagtcaggtttaaataaaggctgttcaaataagcccacagct
atgaacaaacatactgttaatgtgagcactgctagtggaggagtccagaattctggagtt
gtcagagaagcagctaccacttccattgccacagttctgccacagcccacgacagcagtt
gtggggaaaggaacagttgctgttcaagacaaagcaggtctgcctcgaagcataaacaca
gatattttatctaaggaaacagagagtgggaaaacccaggatttctccagctttgatgat
actggaaaaagtagtttaggtgacatgttctcacctatcagagatgatgctgtagttaac
aaaggaagtgatgagtccgtaggcaaaggagatggccttgactttctaccacagttgaac
tcagtgtttcctccaagaaaaaatccagtaacttcaagcacttcagtgttgcattctagt
cctcttaatgtctttatggggtctccagggaaagaagaaaatgaaaatcatgatctgaca
gctgaatctaagaaaatgtatctgggaaaacaggaacctaaagactccttcaagcagttt
gcaaagttgatctccggtgctgaaactggaaatctaaatacctctccatcatccaaccaa
acaagaagtcctgagaaatttgaaaagccagaaaaagaaattgaaggccagtttatatat
gaacttccagtcaatggatcctcaactccaaatccaaagatagcatcttctgtcactgct
ggagttgccagttcactgtcagaaaaaatagctgataccattggaaataatcggccaaat
gcaccattgacatctgttcaaatccgttttattcagaacatgatacaggaaacattggat
gactttagagaagcatgccatagggatattgtgaatttgcaagtggagatgattaaacag
tttcatatgcaattgaatgaaatgcactctttgttggaaagatactcagtgaacgaaggt
ttagtggcagaaattgaaagactacgagaagaaaacaaaagactccgggcacacttttga

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