Physeter macrocephalus (sperm whale): 102992241
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Entry
102992241 CDS
T06011
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03013
Nucleocytoplasmic transport
pcad05014
Amyotrophic lateral sclerosis
pcad05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102992241
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102992241
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102992241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102992241
03036 Chromosome and associated proteins [BR:
pcad03036
]
102992241
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102992241
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102992241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
102992241
NCBI-ProteinID:
XP_028356804
Ensembl:
ENSPCTG00005020304
UniProt:
A0A455C5V3
LinkDB
All DBs
Position
16:60563121..60638410
Genome browser
AA seq
1188 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTASTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSSGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGADTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSSATGL
FSSSTTNSGFAYGQNKTGFGTSTTGFGTNPGGLFGQQNQQATSLFSKPFAQAITTQTTGF
SFGNTNTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQTSTGFGAV
GSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNTSGNSIF
GSKPGPGTLGAGLGAGFGTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGFG
APQAPVALTDPNASAAQQAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLNNSNLFSPVNRDSEDLASPSDYPENGERFSFLSKPVDENHQQDGDDDSLVSRFYT
NPIAKPIPQTPESAGNKHNSNNSVDDTIVALNMRAALRNGLEGSSEETSFHEESLQDDRE
EIENNTYHMHPAGIVLTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGD
VNLTNLNLDDIVHIRRKEVIVYLDDNQKPPMGEGLNRKAEVTLDGVWPTDKTSRCLIKSP
DRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKTS
TKKLKTAPLPPAGQATPFQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLD
SMLEESVPEDQEPVSASTHIASSLGINPHVLQIMKASLLADEEDVDMVLDQRFSRLPSKA
DTSQEICSPRLPISATHSSKSRSLVGGLLQSKFASGTFLSPSASLQECRTPRTSSLMNIP
STSPWSVPPPLTSVFTVPSPAPEVQLKTVGTRRQPGLVPLEKSVTYGKGKLLMDLALFMG
RSFRVGWGPNWTLANSGEQLSGPQELENHQIADSMEYGFLPNPVAVKS
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaacaccctttgggggtggcaccggtggctttggcacagct
tcaacatttgggcagaatactggttttggcactactagtggaggggcatttggaacatct
gcatttggttctagcaacaataccggaggcctgtttggaaattcacagaccaaaccagga
ggcttatttggtaccaattcatttagccagccagctacctccacaagcagtggctttggg
tttggtacatcaacaggaacatcaaacagcttgtttggaactgcaagcacagggaccagt
ctcttctcatcccaaaacaatgcctttgcacaaaataaaccaacaggctttgggaatttt
ggaacaagtaccagcagcgggggactttttggaactacaaataccacctctaatcctttt
ggtagcacatctggctccctctttgggccaagtagttttacagctgctcctactgggact
actatcaagtttaaccctccaactggtgcagatactatggttaaagctggagttagcact
aacatcagtaccaagcaccagtgtattactgctatgaaagaatatgaaagcaagtcccta
gaggaacttcgtttagaggattatcaggccaaccggaaaggcccgcagaaccaggtggga
gcaggtaccacaactggcttgtttgggtcttctccagccacctccagtgcaacaggactc
ttcagttcttccactacaaattcaggctttgcctatggtcagaacaaaacaggctttgga
actagtacgactggatttggaacaaatccaggtggtctttttggccaacagaatcagcag
gctaccagcctcttcagcaaaccatttgcccaggccataactacccagaccactggcttt
tcctttggtaataccaacacactaggacagccaagcaccaacaccatgggtttatttgga
gtaacccaagcctcacagccgggaggtctttttgggacagctacaaacaccagcactggg
acagcatttggaacaggaacaggtctctttgggcagaccagtactggatttggtgctgtt
ggttcgaccctgtttggcaataacaagcttactacatttggaaccagcacaaccagtgct
ccttcgtttggtacaaccagtggcgggctctttggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttgggtttggcacaaataccagtgggaatagtattttt
ggaagtaagccaggacctggaactctgggagccgggcttggtgcaggatttggaacagct
cttggtgctggacaggcatctttatttgggaacaaccagcctaagatcggagggcctctt
ggtacaggagcctttggggcccctggatttaatactacgacagccactttgggcttcgga
gccccccaggccccagtagctttgacagatccaaatgcttctgctgcccagcaggctgtt
ctccaacagcacatcaatagtctgacatactcaccttttggagactctcctctcttccgg
aatcccatgtcagaccctaagaagaaagaagagagattgaaaccaacaaatccagcagcc
cagaaggctctcacaacacctacacattataaactgacaccccgccctgccaccagagtc
cgaccgaaggctttacaaacaacaggcacagccaagtcacatctctttgatgggctagat
gacgatgaaccatccttagccaatggagcattcatgcccaagaagagcattaagaagttg
gttttgaaaaaccttaacaatagcaatctcttctctcctgttaatcgtgattcagaagat
ctagcttcaccatctgattatccagaaaatggagagagattcagttttctgagcaaacca
gtcgatgaaaaccatcagcaggatggagatgatgattctcttgtgtcacgtttttatact
aaccctattgccaaacccattcctcaaaccccggagagtgctggaaataaacataacagc
aacaacagtgtggatgataccattgttgcgttaaacatgcgtgctgccttgcgaaatggg
ctggaaggaagcagtgaagagacctcttttcatgaggagtcactgcaggatgaccgagaa
gaaatagaaaataatacttaccatatgcatccagcaggcatcgttctcactaaggttggc
tactatactattccatccatggatgacctagctaaaattaccaatgaaaaaggagagtgc
attgtctctgacttcactattggtcgtaaaggttatggttcaatctattttgaaggagat
gtgaatttgacaaatctaaatttagatgacattgtgcatatccgaaggaaagaagtgatt
gtctacttagatgataaccaaaaaccacctatgggtgaagggctaaataggaaggctgaa
gttacattggatggagtttggccaacagacaaaacatctcgttgtttaataaagagccca
gatcgacttgctgatatcaactatgagggaagattggaagcagtttcaaggaaacaggga
gctcagttcaaagagtaccgtcctgaaactggttcttgggtatttaaggtctctcatttt
tctaagtatggccttcaggattctgatgaagaggaggaggaacggccatccaaaactagt
acaaagaagttgaagactgcccctttacctcctgcaggccaggccaccccattccagatg
gctcttaatggcaaaccagcacctccgccccagagccagagcccagaggtggagcagtta
gggagggttgtggaactggacagtgacatggtagatatcacccaggagccagttttggat
tccatgttagaagagagcgtgcctgaggatcaggaacctgtgtctgcctcaacacacatt
gcgtcttcactgggaattaatccacatgtcttacagatcatgaaagcatcactgcttgct
gatgaagaagatgtagatatggtcctggatcaacgcttcagtcgccttccttctaaagca
gatacgtctcaagaaatctgttctcccaggctccccatttcagcaactcactcatcaaaa
tcccgttcattagtaggtgggttactacaatcaaaatttgcaagtggaacttttctttca
ccaagtgcctctttacaagagtgtcgcactcccagaacatcgtcattgatgaatattcca
tccacatccccttggtctgtccctccacccctgacctctgtgtttacggtgcccagccca
gcccctgaggttcagttgaaaacagtgggtacacgcagacaaccaggcctagtccctctt
gaaaagtctgtcacctatggaaaggggaaactcctgatggacctggccctatttatggga
cgctcatttcgggttggttggggccccaactggactcttgctaatagtggagaacagctg
agtgggcctcaggaactggaaaatcatcagattgctgattctatggaatatggattcctg
cctaatccagtagctgttaaatcgtga
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