Physeter catodon (sperm whale): 102992323
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Entry
102992323 CDS
T06011
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04015
Rap1 signaling pathway
pcad04510
Focal adhesion
pcad04722
Neurotrophin signaling pathway
pcad04910
Insulin signaling pathway
pcad05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
102992323 (RAPGEF1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102992323 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
102992323 (RAPGEF1)
09156 Nervous system
04722 Neurotrophin signaling pathway
102992323 (RAPGEF1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
102992323 (RAPGEF1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
102992323
NCBI-ProteinID:
XP_054945365
UniProt:
A0A9W2X1X7
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Position
13:86232121..86288443
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AA seq
1288 aa
AA seq
DB search
MLNISFQNLSWLEEKEKEVVSALRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQS
DPRIQHSSALSSCYSRVYQSLANLIRWSDQVMLEGVNSEDKEMVTTVKGVIRAVLDGVKE
LVRLTIEKQGHPSPTSPVKPSSPACKPDGQSELPLTDREMEILNKTTGLSQSAEGLPDST
DEEVAPPKPPLPGIRVVDNSPPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINR
QDFDVDCYAQRRLSGGSHSYGGESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCE
TLDHYDPDYEFLQQDLSNADQIPQQVACNLSPLPESLGESGSPFLGHPFQLPLGSCPQPE
GPSAPGQQMDVPPALPEKKRRSAASQTADSSGCRASYERHPSQYDNISEEDLQNPASVQS
VPFTPFAAILPYQQGGSSASVEFVGDFTVPESTGDPEKPPPLPEKKNKHMLAYMQLLEDY
SEPQPSMFYQTPQKEHIYQQKNKLLMEVYGFSDSFSAGDAPQELAPPPALPPKQRQLASY
AAASFSSVSYCVQQTKVAFTPEDGSAAPGISVSVSHSFLSRHGNLPVPSVSRSLPLATGK
LVSWSRPCRSCLRRVCCCPPPALSLRRPRPRRDRARVAGWPRPEGPRERVGWGAWAATWE
RHHPARSRQGCFGLLIPFSHRALGQPCSVLRFKRNSPPRRKQSPGEQVIPGMTEFEFESC
ISWLLLTCSVTQHPKTLWLKTTVTVCHCLGHSLVAGPLLKLLPPTPAGKGPLHALLLSPP
GRDLGTASSLHPVLLSIPQAPCGGGGSGPGLLAGAAARGGPVQGSGCTTQTPRTGPRCLG
PREPWSSGSVDTTQTVSLSRAPKSPDAPEAQSEEEVDELSLIDHNEIMARLTLKQEGDDG
PDVRGGSGDILLVHATETDRKDLVLYCEAFLTTYRTFITPEELIKKLQYRYEKFSPFADT
FKKRVSKNTFFVLVRVVDELCLVELTEEILKLLMELVFRLVCNGELSLARVLRKNILDKV
DQKKLLRCANSDQPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAK
EQNEEKSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSY
LAILSALDSAPIRRLEWQKQTSEGLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLIL
QDLTFVHLGNPDYIDGKVNFSKRWQQFNILDSMRCFQQAHYDIRRNDDIINFFNDFSDHL
AEEALWELSLKIKPRNITRRKTDREEKT
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacatttcctttcagaacctgagctggctggaagagaaagagaaggaagttgtc
agtgccttgcgctactttaagaccattgtggacaaaatggctattgataagaaggtactg
gagatgcttccagggtctgccagcaaggtgctggaggccatcttacccctggtgcagagc
gaccctcgaattcaacacagctcagccctctcctcctgctatagccgagtgtaccaaagt
ctcgccaacctcattcgttggtctgaccaagtgatgctagaaggtgtgaactcagaagat
aaagagatggtgacaactgtcaagggggtcatcagagccgtgctggacggagtgaaggag
ctggtcagacttaccatcgagaagcaggggcatccgtctccaacaagcccagtgaaaccc
agttccccagcctgcaaacccgacggccagtctgagctccccctgacagatcgagagatg
gagattctaaacaagacgaccggcctgtcgcagtcggccgaggggctcccagattccacg
gatgaagaggtcgcgccccccaaaccgcccttacctggcattcgtgtggttgataatagt
cctccaccagcattgccaccgaagaagagacagtcggctccatcccccacccgagtggcc
gtcgtggcccccatgagtcgagccaccagtggctccagtttgcctgttggaattaatagg
caggattttgacgtggactgttacgcacagagacgactgtcgggcggcagccactcatat
ggcggcgagtcgccccgcctgtccccctgcagcagcataggcaagctcagcaagtcggac
gagcagctgtcctctctggacagggacagcgggcagtgctcccggaacacaagctgtgaa
acgctagatcattacgaccctgactacgaattcctccagcaagacctctctaacgcagac
cagatacctcagcaagtggcctgtaacctcagcccgttgccagagtccttgggggagtct
gggtctccatttcttggccatcctttccagttgcctctgggcagctgtccccagccagag
gggccctcggccccagggcagcagatggacgtgccgcctgctcttcccgagaagaagcgc
aggagcgcggcctcccagacggcggacagctctggctgcagggcgtcctacgagcggcac
ccctcgcagtacgacaacatctccgaggaggacctgcagaacccggcctcggtccagtcc
gtccccttcacgccctttgctgctattcttccctatcagcaaggaggttcctcagcctct
gtcgaatttgtgggtgatttcactgttcctgagtcaacgggtgacccagaaaaacctcct
cctctcccagagaagaaaaacaaacacatgctggcctacatgcagctgctcgaggactac
tcggagccgcagccctccatgttctaccagacgccgcagaaggagcacatctaccagcag
aagaacaagctcctcatggaggtgtacggcttcagcgactctttcagcgccggcgatgcc
ccgcaggagctcgcgcccccccccgccctgccccccaagcagcggcagctggcctcctat
gctgctgcttccttctcctctgtctcctactgtgtccagcagactaaagtggccttcact
cccgaggacggcagtgccgctccgggcatcagtgtgtccgtctctcactcctttctcagc
cggcacggcaacttacctgtgccctcggtgagtcgctccctgccgctcgccactgggaag
ctggtgagctggtctcgcccttgtcgctcctgcctccgacgtgtgtgctgctgcccaccg
ccggctctctcgctccgcaggccccgcccccggcgggacagggcgcgcgtggctggctgg
ccgcggcccgaaggaccgcgcgagcgggtggggtggggagcgtgggcggccacctgggag
cgtcaccacccagccagaagccggcagggatgttttggccttcttattccattctcacac
cgggccttgggtcagccctgtagcgttctgcgtttcaaaaggaacagtccgccacgtagg
aagcaaagccctggagagcaggtgatacccggcatgacggagtttgagtttgagagctgt
atcagttggcttttgctaacttgctccgtaacccaacaccccaaaaccttgtggcttaaa
acaacggtaactgtctgtcattgcctaggacacagcttagtagctggacccctgctcaag
ctgctgccaccgacacccgcgggcaaagggccgctgcacgcgctgctcctcagtccaccg
gggagagacctggggacggcatcgagtctgcatcccgttctcttgtccatcccccaggcc
ccctgtgggggggggggaagcgggcctgggcttctcgctggagctgcagcccggggagga
cccgttcaggggagcggctgtaccacgcagaccccacgcacggggccacgctgcctcggc
ccccgggagccgtggagctcagggtctgttgacacaacacaaaccgtttctctctccagg
gccccaaagtcaccggatgctccagaggctcagtcggaggaggaagtagacgagctgtcc
ctcatcgaccacaatgagatcatggcaaggctgacgctcaagcaagagggcgacgacgga
ccagacgtccggggaggatctggtgacatcctactggtccacgctactgagacggacagg
aaagatctggtgttgtactgcgaggccttcttgaccacctacaggaccttcatcacccct
gaggagctcatcaagaagctgcagtacaggtacgagaagttctctccttttgccgacacg
ttcaagaagcgcgtcagcaagaacacgttcttcgtcctggtacgggtggtggacgagctc
tgcctagtggagttgacggaagagatcttgaagctgctgatggagctggtcttccgcctg
gtgtgcaacggggagctcagtctggcccgtgtgctccggaagaacatcctggacaaggtg
gaccagaagaagctgctcaggtgtgccaactccgaccagcccctggcggccaggggcgta
gcagccaggcccgggaccttgcatgactttcacagccatgagatagctgagcagctgaca
ctgctagatgccgagctcttttataagatagagattcctgaggttttgctttgggcaaaa
gagcagaacgaggagaagagccccaacttgacccagttcacggagcacttcaacaacatg
tcctactgggtccggtcaatcatcatgttacaggaaaaggcccaagacagggaacggctg
ctcttgaagttcatcaagatcatgaagcacttacggaagctgaacaacttcaactcctac
ctggccatcctctcagcgctggactcggcccccatccgcaggctggagtggcagaaacag
acctcagagggcctggcggagtactgcacgctgattgacagctcatcctccttccgcgcc
taccgggccgccctctcggaggtggagccaccgtgcatcccatacctggggctcatcctg
caggacctcaccttcgttcacctgggaaacccagactatattgacgggaaggtgaatttt
tccaaacggtggcagcagttcaacatcctggacagcatgcggtgcttccagcaggcgcat
tatgacatccggagaaacgacgatatcataaacttcttcaatgacttcagtgaccacctg
gccgaggaggcgctgtgggaactctctctgaaaatcaaacccaggaacataacacggagg
aaaacagaccgcgaagagaagacctag
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