Physeter macrocephalus (sperm whale): 102992323
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Entry
102992323 CDS
T06011
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04015
Rap1 signaling pathway
pcad04510
Focal adhesion
pcad04722
Neurotrophin signaling pathway
pcad04910
Insulin signaling pathway
pcad05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
102992323 (RAPGEF1)
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
102992323 (RAPGEF1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
102992323 (RAPGEF1)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
102992323
NCBI-ProteinID:
XP_054945365
UniProt:
A0A9W2X1X7
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Position
13:86232121..86288443
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AA seq
1288 aa
AA seq
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MLNISFQNLSWLEEKEKEVVSALRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQS
DPRIQHSSALSSCYSRVYQSLANLIRWSDQVMLEGVNSEDKEMVTTVKGVIRAVLDGVKE
LVRLTIEKQGHPSPTSPVKPSSPACKPDGQSELPLTDREMEILNKTTGLSQSAEGLPDST
DEEVAPPKPPLPGIRVVDNSPPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINR
QDFDVDCYAQRRLSGGSHSYGGESPRLSPCSSIGKLSKSDEQLSSLDRDSGQCSRNTSCE
TLDHYDPDYEFLQQDLSNADQIPQQVACNLSPLPESLGESGSPFLGHPFQLPLGSCPQPE
GPSAPGQQMDVPPALPEKKRRSAASQTADSSGCRASYERHPSQYDNISEEDLQNPASVQS
VPFTPFAAILPYQQGGSSASVEFVGDFTVPESTGDPEKPPPLPEKKNKHMLAYMQLLEDY
SEPQPSMFYQTPQKEHIYQQKNKLLMEVYGFSDSFSAGDAPQELAPPPALPPKQRQLASY
AAASFSSVSYCVQQTKVAFTPEDGSAAPGISVSVSHSFLSRHGNLPVPSVSRSLPLATGK
LVSWSRPCRSCLRRVCCCPPPALSLRRPRPRRDRARVAGWPRPEGPRERVGWGAWAATWE
RHHPARSRQGCFGLLIPFSHRALGQPCSVLRFKRNSPPRRKQSPGEQVIPGMTEFEFESC
ISWLLLTCSVTQHPKTLWLKTTVTVCHCLGHSLVAGPLLKLLPPTPAGKGPLHALLLSPP
GRDLGTASSLHPVLLSIPQAPCGGGGSGPGLLAGAAARGGPVQGSGCTTQTPRTGPRCLG
PREPWSSGSVDTTQTVSLSRAPKSPDAPEAQSEEEVDELSLIDHNEIMARLTLKQEGDDG
PDVRGGSGDILLVHATETDRKDLVLYCEAFLTTYRTFITPEELIKKLQYRYEKFSPFADT
FKKRVSKNTFFVLVRVVDELCLVELTEEILKLLMELVFRLVCNGELSLARVLRKNILDKV
DQKKLLRCANSDQPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAK
EQNEEKSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSY
LAILSALDSAPIRRLEWQKQTSEGLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLIL
QDLTFVHLGNPDYIDGKVNFSKRWQQFNILDSMRCFQQAHYDIRRNDDIINFFNDFSDHL
AEEALWELSLKIKPRNITRRKTDREEKT
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacatttcctttcagaacctgagctggctggaagagaaagagaaggaagttgtc
agtgccttgcgctactttaagaccattgtggacaaaatggctattgataagaaggtactg
gagatgcttccagggtctgccagcaaggtgctggaggccatcttacccctggtgcagagc
gaccctcgaattcaacacagctcagccctctcctcctgctatagccgagtgtaccaaagt
ctcgccaacctcattcgttggtctgaccaagtgatgctagaaggtgtgaactcagaagat
aaagagatggtgacaactgtcaagggggtcatcagagccgtgctggacggagtgaaggag
ctggtcagacttaccatcgagaagcaggggcatccgtctccaacaagcccagtgaaaccc
agttccccagcctgcaaacccgacggccagtctgagctccccctgacagatcgagagatg
gagattctaaacaagacgaccggcctgtcgcagtcggccgaggggctcccagattccacg
gatgaagaggtcgcgccccccaaaccgcccttacctggcattcgtgtggttgataatagt
cctccaccagcattgccaccgaagaagagacagtcggctccatcccccacccgagtggcc
gtcgtggcccccatgagtcgagccaccagtggctccagtttgcctgttggaattaatagg
caggattttgacgtggactgttacgcacagagacgactgtcgggcggcagccactcatat
ggcggcgagtcgccccgcctgtccccctgcagcagcataggcaagctcagcaagtcggac
gagcagctgtcctctctggacagggacagcgggcagtgctcccggaacacaagctgtgaa
acgctagatcattacgaccctgactacgaattcctccagcaagacctctctaacgcagac
cagatacctcagcaagtggcctgtaacctcagcccgttgccagagtccttgggggagtct
gggtctccatttcttggccatcctttccagttgcctctgggcagctgtccccagccagag
gggccctcggccccagggcagcagatggacgtgccgcctgctcttcccgagaagaagcgc
aggagcgcggcctcccagacggcggacagctctggctgcagggcgtcctacgagcggcac
ccctcgcagtacgacaacatctccgaggaggacctgcagaacccggcctcggtccagtcc
gtccccttcacgccctttgctgctattcttccctatcagcaaggaggttcctcagcctct
gtcgaatttgtgggtgatttcactgttcctgagtcaacgggtgacccagaaaaacctcct
cctctcccagagaagaaaaacaaacacatgctggcctacatgcagctgctcgaggactac
tcggagccgcagccctccatgttctaccagacgccgcagaaggagcacatctaccagcag
aagaacaagctcctcatggaggtgtacggcttcagcgactctttcagcgccggcgatgcc
ccgcaggagctcgcgcccccccccgccctgccccccaagcagcggcagctggcctcctat
gctgctgcttccttctcctctgtctcctactgtgtccagcagactaaagtggccttcact
cccgaggacggcagtgccgctccgggcatcagtgtgtccgtctctcactcctttctcagc
cggcacggcaacttacctgtgccctcggtgagtcgctccctgccgctcgccactgggaag
ctggtgagctggtctcgcccttgtcgctcctgcctccgacgtgtgtgctgctgcccaccg
ccggctctctcgctccgcaggccccgcccccggcgggacagggcgcgcgtggctggctgg
ccgcggcccgaaggaccgcgcgagcgggtggggtggggagcgtgggcggccacctgggag
cgtcaccacccagccagaagccggcagggatgttttggccttcttattccattctcacac
cgggccttgggtcagccctgtagcgttctgcgtttcaaaaggaacagtccgccacgtagg
aagcaaagccctggagagcaggtgatacccggcatgacggagtttgagtttgagagctgt
atcagttggcttttgctaacttgctccgtaacccaacaccccaaaaccttgtggcttaaa
acaacggtaactgtctgtcattgcctaggacacagcttagtagctggacccctgctcaag
ctgctgccaccgacacccgcgggcaaagggccgctgcacgcgctgctcctcagtccaccg
gggagagacctggggacggcatcgagtctgcatcccgttctcttgtccatcccccaggcc
ccctgtgggggggggggaagcgggcctgggcttctcgctggagctgcagcccggggagga
cccgttcaggggagcggctgtaccacgcagaccccacgcacggggccacgctgcctcggc
ccccgggagccgtggagctcagggtctgttgacacaacacaaaccgtttctctctccagg
gccccaaagtcaccggatgctccagaggctcagtcggaggaggaagtagacgagctgtcc
ctcatcgaccacaatgagatcatggcaaggctgacgctcaagcaagagggcgacgacgga
ccagacgtccggggaggatctggtgacatcctactggtccacgctactgagacggacagg
aaagatctggtgttgtactgcgaggccttcttgaccacctacaggaccttcatcacccct
gaggagctcatcaagaagctgcagtacaggtacgagaagttctctccttttgccgacacg
ttcaagaagcgcgtcagcaagaacacgttcttcgtcctggtacgggtggtggacgagctc
tgcctagtggagttgacggaagagatcttgaagctgctgatggagctggtcttccgcctg
gtgtgcaacggggagctcagtctggcccgtgtgctccggaagaacatcctggacaaggtg
gaccagaagaagctgctcaggtgtgccaactccgaccagcccctggcggccaggggcgta
gcagccaggcccgggaccttgcatgactttcacagccatgagatagctgagcagctgaca
ctgctagatgccgagctcttttataagatagagattcctgaggttttgctttgggcaaaa
gagcagaacgaggagaagagccccaacttgacccagttcacggagcacttcaacaacatg
tcctactgggtccggtcaatcatcatgttacaggaaaaggcccaagacagggaacggctg
ctcttgaagttcatcaagatcatgaagcacttacggaagctgaacaacttcaactcctac
ctggccatcctctcagcgctggactcggcccccatccgcaggctggagtggcagaaacag
acctcagagggcctggcggagtactgcacgctgattgacagctcatcctccttccgcgcc
taccgggccgccctctcggaggtggagccaccgtgcatcccatacctggggctcatcctg
caggacctcaccttcgttcacctgggaaacccagactatattgacgggaaggtgaatttt
tccaaacggtggcagcagttcaacatcctggacagcatgcggtgcttccagcaggcgcat
tatgacatccggagaaacgacgatatcataaacttcttcaatgacttcagtgaccacctg
gccgaggaggcgctgtgggaactctctctgaaaatcaaacccaggaacataacacggagg
aaaacagaccgcgaagagaagacctag
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