Physeter catodon (sperm whale): 102992455
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Entry
102992455 CDS
T06011
Name
(RefSeq) LOW QUALITY PROTEIN: TATA-box-binding protein-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03022
Basal transcription factors
pcad05016
Huntington disease
pcad05017
Spinocerebellar ataxia
pcad05165
Human papillomavirus infection
pcad05166
Human T-cell leukemia virus 1 infection
pcad05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102992455
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102992455
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
102992455
05165 Human papillomavirus infection
102992455
09164 Neurodegenerative disease
05016 Huntington disease
102992455
05017 Spinocerebellar ataxia
102992455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcad03000
]
102992455
03021 Transcription machinery [BR:
pcad03021
]
102992455
Transcription factors [BR:
pcad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
102992455
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102992455
RNA polymerase III system
TFIIIB
102992455
RNA polymerase I system
SL1/TIF-1B
102992455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
102992455
NCBI-ProteinID:
XP_054937812
UniProt:
A0A9W2WF40
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All DBs
Position
21:complement(79594083..79594995)
Genome browser
AA seq
303 aa
AA seq
DB search
MDQNNNLPPYAQGLAFPQGAMTPGIPIFSLMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ
QQAAMAAVQQSTSQXATQGASGQTPQLFHSQTLTTAPLPGTTALYPSPMTPITPATPASE
SSGIVPQLQNIVSTVNLGCKLDLKTIALRAGNAEYNPKRFAAVIMRIREPRTTALIFSSG
KMVCTGAKSEEQSRLAARKYARVVQKLGVPAKYLDFKIQNMGGGSCDVKFPIRLEGFALT
HQQFSSYEPELFPGLIYRMTKPRIVLLIFVSGKVILTGAKVRAEIYEAFENIYPILKGFR
KTT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaacaacaacctcccaccttatgcccagggcctggccttccctcagggtgcc
atgactcctggaatccctatctttagtctgatgatgccttatggcacaggactgactcca
cagcctattcagaacaccaacagtctgtctatattggaagagcagcaaagacagcagcag
cagcaggcggcaatggcagccgttcagcagtcgacgtcccagtaggcaacccagggggcc
tcgggccagacaccacagcttttccactcacagactttaacaaccgcacccttgccgggc
accactgccctgtatccctcccccatgacccctattacccctgccacgccagcctcagag
agctctgggattgtgccgcagctgcaaaatattgtatccacagtgaatcttggttgtaaa
cttgacctaaagaccattgcacttcgtgcagggaatgctgaatataatcccaagcggttt
gctgctgtaattatgagaataagagagccccggaccactgcactgatattcagttctggg
aagatggtgtgcacaggagccaagagtgaagaacagtccagactagcagcaagaaaatat
gccagggttgtacagaagttgggtgttccagctaagtacttggacttcaagattcagaac
atggggggggggagctgtgatgtgaagttccctataaggttagaaggctttgcgcttacc
caccaacagttcagtagttatgagccagagttgtttcctggtttaatctacagaatgacc
aaaccgagaattgttctccttatttttgtttctggaaaagttatattaacaggtgctaaa
gtcagagcagaaatttacgaagcctttgagaacatctaccctattctaaagggtttcagg
aagacaacgtaa
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