Physeter macrocephalus (sperm whale): 102992708
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Entry
102992708 CDS
T06011
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X2
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102992708 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcad04121
]
102992708 (HERC4)
Enzymes [BR:
pcad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102992708 (HERC4)
Ubiquitin system [BR:
pcad04121
]
Ubiquitin ligases (E3)
HECT type E3
102992708 (HERC4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
102992708
NCBI-ProteinID:
XP_023987855
Ensembl:
ENSPCTG00005004555
UniProt:
A0A2Y9TG55
LinkDB
All DBs
Position
20:complement(20371369..20511621)
Genome browser
AA seq
1057 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKKVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG
SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS
PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR
TQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIA
CGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDFDSEE
YFCVKRIFSGGDQSFSHYSNPQNCRPPDDFRYPDPSKQIWTVNEALIQKWLSYPSGRFPV
EIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQ
QVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP
LKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEIL
HRVNEKTGQIIQYDKFYIHEVQELIDIRNDYINWVQQQAYGMDVNHGLTELADIPVTICT
YPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIVG
DAMEVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSR
LIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKKKPSLDDLKELMPD
VGRSMQQLLDYPEDDVEETFCLNFTITVENFGATEVKELVLNGADTAVNKQNRQEFVDAY
VDYIFNKSVASLFDAFHAGFHKVCGGKVLQLFQPNELQAMVIGNTNYDWKELEKNTEYKG
EYWAEHPTIKMFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLILVIQSTGGGEEYLP
VSHTCFNLLDLPKYTDKETLRSKLIQAIDHNEGFSLI
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggaaatgcatcttttggacagctaggtttgggtggaattgatgaagaa
attgtactagagcccagaaaaagcgacttttttttaaataaaaaggttcgagatgtagga
tgtggactcagacatactgtatttgttctggatgatggaacagtatacacatgtggatgt
aatgatctagggcagctaggtcatgaaaaatccagaaagaaaccagagcaggttgttgcg
ctggatgcccaaaatatcgtagctgtttcatgtggagaagctcatacattagcactaaac
gacaagggccaggtgtatgcttggggtctcgattctgatggacagcttggcctgctagga
tcagaggaatgtatcagagtacccagaaatattaaaagtttgtcggatatccagatagta
caggttgcttgtggctactatcactcacttgcactttctaaagcaagtgaagtcttctgt
tggggacagaataaatatggccagttgggtttaggcattgactgtaaaaagcaagcttca
ccacaactgattaagtctttacttggaatccctttcatgcaagttgcagcaggaggagcc
catagttttgtactcaccctttctggagctatctttggatggggacgcaacaaatttggt
cagctaggtcttaatgatgaaaatgataggtatgttcctaatttactaaagtcactaaga
actcagaaaatagtttatatttgttgtggagaagatcatactgctgcactaaccaaggaa
ggtggagtgtttacttttggagctggagggtatggtcagttgggtcataactctaccagt
catgaaataaacccaaggaaagtttttgaacttatgggaagcattgtcactcagattgct
tgtggaaggcagcacacttctgcttttgttccttcatcaggacgaatttattcttttgga
cttggtggtaatggacagctaggaactggttcaacaagcaacagaaaaagtcctttcact
gtgaaaggaaattggttcccttataatggacaatgtccaccagattttgattctgaagaa
tatttctgtgtaaaaagaattttctcaggtggagatcaaagcttttcacattactctaat
ccccagaactgtaggccaccagatgactttagatatcctgatccttcgaagcagatctgg
actgtgaatgaagctctaattcaaaaatggctgagctacccctctggaagatttcctgta
gagatagccaatgaaatagatggaacgttttcttcgtctggttgtctaaatggaagtttt
ttagctgttagcaatgatgatcactatagaacgggcaccagattttcaggggttgatatg
aatgctgctaggcttttattccacaaacttatacaacctgatcatcctcagatatctcag
caggtggcagctagcttggaaaagaatcttattcctaaactgactagctccttacctgat
gttgaagcattgagattttatcttactctaccagaatgtcccctgatgagtgattccaac
aatttcaccacaatagcaattccctttggtacagctcttgtgaacctagaaaaggcacca
ctgaaagtacttgaaaactggtggtcagtacttgaacctccactattcctcaagattgta
gaactttttaaggaggttgtggtacatcttttgaaactctacaagatcggcattccccct
tctgaaagaagaattttcaacagttttcttcataccgcattaaaggttttagaaatatta
catagggtaaatgagaaaactggacagattatacaatatgataaattttatatacatgaa
gtacaagaattgatagacatacggaatgattatatcaactgggtccaacagcaggcctat
ggaatggatgtcaaccatggattaactgagttggcagatatccctgttacaatctgcaca
tatccatttgtatttgacgcccaagcaaaaactactctgttacaaacagatgcagtctta
cagatgcagatggctattgaccaggcccacagacagaatgtctcctctctttttctccca
gtgattgaatctgtgaatccttgcttaattctagtggtacgtagagaaaatatagtagga
gatgcaatggaagtccttaggaaaacaaagaatatagactacaaaaagccactcaaggtt
atatttgttggagaagatgctgttgatgcaggaggggtacgcaaagaatttttcttgctc
atcatgagggaattattggatcctaaatatggcatgtttaggtattatgaagattccagg
ctcatttggttttctgataagacatttgaagacagtgatttgttccacttgattggtgtt
atctgtggattagcaatttataattttactattgtggacctccattttcctttggctttg
tataagaaactgctaaaaaagaagccatctctggatgatttgaaagaactaatgcctgat
gttgggagaagcatgcaacagttactggattatccagaagatgatgttgaggaaacattt
tgtcttaattttacgatcacagttgaaaactttggtgcaacagaagtgaaagaactggtt
ctaaatggtgcagacacagctgttaacaaacaaaatcggcaggagtttgttgatgcttat
gtggattacatattcaataaatcagtggcttccttatttgatgcttttcatgcgggcttt
cataaggtctgtggaggaaaagtccttcagctcttccagcctaatgaactacaagcaatg
gttattggaaatacaaattatgactggaaggaactggaaaagaatacagaatacaaggga
gaatattgggcagaacatcctacaataaaaatgttttgggaagtatttcacgaattacca
ttggaaaagaaaaaacaatttttgttatttttgacaggtagtgatcgcattcctattctt
ggtatgaagagtctaatactagtcatccagtcaacaggaggtggtgaggaatatctccca
gtttcccatacctgttttaatcttctggatcttccaaaatatacggataaagaaactcta
cgctctaaactgatccaagctattgatcacaatgaaggcttcagtttaatataa
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