KEGG   Physeter macrocephalus (sperm whale): 102992721
Entry
102992721         CDS       T06011                                 
Symbol
LTBR
Name
(RefSeq) tumor necrosis factor receptor superfamily member 3 isoform X1
  KO
K03159  lymphotoxin beta receptor TNFR superfamily member 3
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad04060  Cytokine-cytokine receptor interaction
pcad04061  Viral protein interaction with cytokine and cytokine receptor
pcad04064  NF-kappa B signaling pathway
pcad04066  HIF-1 signaling pathway
pcad04672  Intestinal immune network for IgA production
pcad05166  Human T-cell leukemia virus 1 infection
pcad05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    102992721 (LTBR)
   04066 HIF-1 signaling pathway
    102992721 (LTBR)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    102992721 (LTBR)
   04061 Viral protein interaction with cytokine and cytokine receptor
    102992721 (LTBR)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    102992721 (LTBR)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    102992721 (LTBR)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    102992721 (LTBR)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04050 Cytokine receptors [BR:pcad04050]
    102992721 (LTBR)
Cytokine receptors [BR:pcad04050]
 Tumor necrosis factor receptors
  TNF receptor superfamily
   102992721 (LTBR)
SSDB
Motif
Pfam: TNFR_c6
Other DBs
NCBI-GeneID: 102992721
NCBI-ProteinID: XP_007103734
Ensembl: ENSPCTG00005014333
UniProt: A0A2Y9EIX9
LinkDB
Position
6:58083503..58090036
AA seq 421 aa
MRLPWAASPCGLAWGPLILGLWGLLAASQPQLVPPYRTENQSCRDQEKEYYEPKHHVCCS
RCPPGTHVSAECGPDQDTTCATCPENSYNEHWNHLSICQLCRPCDRMLGFVEITPCTSKH
KTQCRCQPTLFCVFWGSECVHCESLPHCPPGTEAELKDEDRKANSNCVPCKAGHFQNTSS
PSARCQPHTRCEDQGLVEAVPGTSRSDTSCRNPPEPSETPGRMLVLAVLLPLVSLLLLTT
VLACTWKSHPSLCRKLGSLLKRHPEGEESNTAEGSWEPPRVNPQYPDLVEPLLPTSGDLT
PASAGVPATPGLEEEVLQQQSPLSQARELEAELPEQGQVAHGTNGIHVTGGSVTVTGNIY
IYNGPVLGGARGPGDPPAPPEPPYPIPEEGAPSPPGLSTPYQEDGKAWHLAETETLGCHT
L
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcgcctgccctgggccgcatccccctgcggcctggcctgggggcctctcatattgggc
ctctggggtctgctggcagcatcccagccccagctggtgcccccgtaccgcacggagaac
cagtcctgccgggaccaggaaaaggagtactacgagcccaagcatcacgtctgctgctcc
cgttgccccccaggcacacacgtctcggctgaatgtggccccgaccaggacaccacctgt
gccacgtgccccgaaaattcctacaacgagcactggaaccatctctccatctgccagctg
tgccgcccctgtgaccggatgctgggcttcgtggagatcacgccttgcaccagcaaacac
aaaacccagtgccgctgccagccaacactgttctgcgtcttttggggctctgagtgtgta
cactgcgagtcactcccccactgcccgcctggcactgaagccgagctcaaagatgaagac
aggaaggctaacagcaactgtgttccctgtaaggcagggcacttccagaacacctcctcc
cccagcgcccgctgccagccccacaccaggtgtgaggaccagggcctcgtagaggcagtg
ccaggcacctcccggtctgacaccagctgcagaaatccgccagagccctccgagacgcca
ggaaggatgctggtgctggccgtcttgctgccgctggtctccttgctgctcctcaccact
gtccttgcctgcacctggaagagccacccctctctctgcagaaagctgggatccctgctc
aagaggcatccagagggagaggaatcgaatactgctgaaggaagctgggagcccccgagg
gtcaacccacagtaccctgacctggtagagccacttctgcccacctctggagacttgacc
ccagcttcggccggggtcccggcgaccccaggtttggaggaagaggtgctacaacaacag
agtcctctgagccaggccagggagctggaggctgagctcccagagcaaggccaggtggcc
cacggcaccaatggcattcacgtcaccggcgggtctgtgactgtcaccggtaacatctac
atctacaacgggccagtactggggggagcacggggccccggagacccccccgctcccccg
gagcctccgtaccccatccccgaagagggtgcccctagccctcccgggctctccacaccc
taccaggaggatggcaaagcttggcacctggctgagacagagacactggggtgccacacc
ctctaa

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