Physeter macrocephalus (sperm whale): 102992920 Help Entry 102992920         CDS       T06011                                  Symbol ATG16L1 Name (RefSeq) autophagy-related protein 16-1   KO K17890   autophagy-related protein 16-1 Organism pcad  Physeter macrocephalus (sperm whale) Pathway pcad04136   Autophagy - other pcad04140   Autophagy - animal pcad04621   NOD-like receptor signaling pathway Brite KEGG Orthology (KO) [BR:pcad00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     102992920 (ATG16L1)    04136 Autophagy - other     102992920 (ATG16L1)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     102992920 (ATG16L1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pcad04131]     102992920 (ATG16L1)    03029 Mitochondrial biogenesis [BR:pcad03029]     102992920 (ATG16L1) Membrane trafficking [BR:pcad04131]  Autophagy   Autophagosome formation proteins    Atg12 conjugation proteins     102992920 (ATG16L1)  Others   Specific organelles associated proteins    Auto phagosome     102992920 (ATG16L1) Mitochondrial biogenesis [BR:pcad03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     102992920 (ATG16L1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_IFT140_1st eIF2A NBCH_WD40 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_WDR19_1st Ge1_WD40 Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_WDR75_2nd Beta-prop_Vps41 Motif Other DBs NCBI-GeneID:  102992920 NCBI-ProteinID:  XP_028352955 Ensembl:  ENSPCTG00005019908 UniProt:  A0A455BVD9 LinkDB All DBs Position 2:complement(132415700..132450108) Genome browser AA seq 429 aa AA seqDB search MTRDLDLLMSHWSGCGESGRRRQARLQKELAEAAKEPLPAEQDDDIEVLVDETSDHAEEA SPVRAVSRAAAKRLSQPAGGLLDSITNIFGLSESPLLGHHSSDAARRRSVSSFPVPQDNV DIHPGSTKEVRVPTTAMCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEF KGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLL DNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRS ESIVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWT RVVFSPDGSYVAAGSAEGSLYIWSVLSGKVEKVLSKHHSSAINAVAWSPAGSHVVSVDKG SKAVLWSEY NT seq 1290 nt NT seq  +upstreamnt  +downstreamnt atgacaagggatttggatttgctgatgagccactggtcaggttgtggggagtctggaagg aggcggcaagcccggctgcagaaggagctcgcagaagcagcaaaggaacctctcccagct gagcaggatgatgacattgaagtccttgtggatgaaacctccgatcacgccgaggaggcc tctccggtgcgggccgtcagcagagcagccgctaagcgactctcgcagcctgctggaggc cttctggattctatcactaatatctttggtctgtccgagtctcccctattgggacatcac tcttccgatgctgccaggaggcgctctgtgtcttcctttccagttccccaggataacgtg gatattcatcctggctctactaaagaagtgcgggtgccaacaactgcgatgtgtgtcttc gacgctcatgatggggaggtcaatgctgtgcagttcagtccgggttcccggctcctcgcc acgggaggcatggatcggagggtgaagctctgggaagtgttcggagacaaatgtgagttc aagggttccctgtccggcagtaatgcaggaattacaagcattgaatttgatagtgctgga tcttacctcttagcagcgtcaaatgattttgcaagccgcatctggactgtggatgactat cggttacggcatacactcacgggacacagcggcaaagtgctgtctgccaagttcctgctg gacaatgcgcgtattgtttctggaagtcacgaccggaccctcaaactctgggatctacgc agcaaagtctgcataaagacggtatttgcgggatccagctgcaatgatattgtctgcaca gagcagtgtgtgatgagtggacattttgacaagaaaattcgtttctgggacatccgatca gagagtattgtccgagagatggagctcttgggaaagattactgccctggacttaaaccca gaaagaactgaactcctcagctgctcccgagatgacctgctaaaaattattgacctacga ataaatgctgtcagacagacattcagcgcgccgggcttcaagtgcggctccgactggacg agagttgtgttcagccctgacggcagttacgtggcagcaggctcggccgagggctctctc tacatctggagcgtgctctctgggaaagtggagaaggtcctttcaaagcatcacagctca gcgatcaacgccgtggcctggtcacctgccggctcccacgtcgtcagcgtggacaaagga agcaaagctgtgctgtggtcagagtactga

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