Physeter catodon (sperm whale): 102993179
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Entry
102993179 CDS
T06011
Symbol
ARHGEF28
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05135 Yersinia infection
102993179 (ARHGEF28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102993179 (ARHGEF28)
Membrane trafficking [BR:
pcad04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102993179 (ARHGEF28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
C1_2
PHD
PH_13
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
102993179
NCBI-ProteinID:
XP_023978030
Ensembl:
ENSPCTG00005001544
UniProt:
A0A2Y9SNT6
LinkDB
All DBs
Position
8:74892719..75218457
Genome browser
AA seq
1712 aa
AA seq
DB search
MTLSDAEAMELNCSEVPLYGQMTVYAKFGKNVYLPKDAEFYFIYNGSHQRHIVIAERTED
NVLQSSVPGHRLQETVTVSVCLCSEGYSPVTMGSDSVTYVDNMACRLARLLITQADRLTA
SSHQTLLTPFALTAGALPALDEELVLALTHLELPLGWTVLGNSSLEVSLHRESLLHLAVR
WGLAKLSQFLLCLPGGVQALALPNEEGATPLDLALRGGCSKLFEDITNFQVRRSPGFSRV
QLSEDASLRYIHSSETLTLTLNHTAEHLLEADIKLFRKYFWDRAVLLKALEEQEARSEEK
SDMPSSTAENEEEIKNSVSSRSSPGKENVKRVKSPVVQLNEHEDQDSLYLDHSFDVLKKS
KHPPTFLAAGRLSDMLNGGDEVYANCMVIDQVDDLDISYINIEGITENTCLESMGSTLGP
QSSKSILPTETSAGMYPPNENTEVTSHTEAQPSFMSPSSSYASSLNLSFGLHGFEKEQSH
LKKRSSSLDALDADSEEEGHSERLRICYTPVSQSSSRTGIPSGDELDSFETSTEPDFNIS
RTESLSLSSSLQLKESLFSGVRSRSYSCSSPKISLGKTRLIRDFTVCNSAEEQRAYSLPE
PPREKRIQEEEWDKYIVPAKSESEKYKVSRTFSFLMNRMTSPRNKSKTKGKDAKDKEKLS
RHQFVPGTFSGSLQCLVCDKTLLGKESFQCSNCNANVHKGCKDAASPCTKKFQVKYNKNK
PQTILGNSSFRDVPPPGLSLHPSSSMPIGLPTGRKETAGQVHPLSRSVPGMTLESFRRSG
ASLESESDGSTWRSRSQSDELFQPMGSPPSTDSFLMEDVVDSSLWSDLSSDAQGFEAESW
SLVVDPSFCSRQEKGVIKRQDVIFELMQTEMHHIQTLFIMSEIFRKGMKEELQLDHSTVD
KIFPCLDELLEIHRHFFYSMKERRQESCIGNDRNFVINRIGDILVQQFSEENANKMKKIY
GEFCSHHKEAVSLFKELQQNKKFQNFIKLRNSNLLARRRGIPECILLVTQRITKYPVLVE
RILQYTKESTEEQKDLCKALCLIKDMIAAVDLKVSEYEKKQKWLEILNKIENKTYTKLKN
GHVFRKQALMSKERTLLYDGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQ
KPSVISLQKLIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNTWMRRIQQAVESCP
EEEGGRTSESDEERRKAEARVAKIQQCQEILSNQDQQICTYLEEKLHIYAELGELSGFED
VHLEPHLLIKPDPGEPPQAASLLAAALKEAESLQVAVKASQMSNACQSPKEGCGEPALQD
VFSSQDASGSPTASLVTEGTGGRGCWDVDPGTQGVGTDLAVSDAGEKVEYRSFPGSSQSE
IIQAIQNLTRLLYSLQAALTVQDSHIEVHRLALQQQEGLSPGPSFRGSPFQDQEKHRSLE
KRQEELASLHKLQHRFQQDQQRWRRRCDQQQREQEAKASRLQERERQCRLQEELLLSSRG
QLDQQLQEYQQNLERLREGQRLVERERERMRAQQSLLRGWKHSRQRSLPAALPPGGVEVM
ELNQSEGLCHENSLFINEALVQMSLNTLNKPTPADIHQDATYPPSISHSDLVRTSENQVD
LKMNISQPLDVSHELWIAAGSCHQIPPLHQSSKDSCKNDLDLSQTAYPPPQDSNPHGPQL
QTFIAEAKLNLQRVTRQDGETGDGTEETIVYL
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgactctgtctgatgcggaagccatggagctgaactgcagcgaagtacctctttatggg
cagatgacggtctatgcgaagtttggcaaaaatgtttatcttcctaaagatgccgagttt
tacttcatttataacggatctcatcagagacacatcgtgattgcagagcgcacagaggat
aacgttctccaatccagcgttccaggccacaggcttcaggagacggtgacggtgtctgtg
tgcctctgctcggaaggttactcccctgtgaccatgggctctgactccgtgacctatgtg
gacaatatggcctgcaggctggctcgtttgctgatcacccaagccgatcgcctcacagcc
agtagccaccagaccttgctgaccccatttgccctgacggcgggagcattgcctgctctg
gacgaggagctcgtgctggctctgacccatctggagttgcctcttgggtggactgtcttg
ggaaattcttcacttgaagtgtctctacatagagagtctcttctgcacctggctgtgaga
tggggccttgctaagctttctcagttcctcctgtgtctccctggaggagtccaggccttg
gctttacccaacgaggagggtgccacgccattagacttagctttacgtggtggatgctcc
aagctgtttgaagacatcacaaacttccaggtcagacgttccccaggtttctcccgagtg
cagctcagcgaagatgcctccctgcggtatattcactcatcagaaacactgaccctgacg
cttaatcacacagccgagcatttgttggaggcggatattaaactctttaggaaatacttt
tgggatagagccgttctcctcaaggctcttgaagagcaagaagccaggtcagaggaaaaa
tcagatatgccctccagcactgcagaaaacgaagaagagattaagaattcggtgtccagc
agatcatcgcctggaaaggagaatgtaaagcgtgtgaaaagcccggtggttcaactgaat
gaacatgaagaccaggacagtctatatttggatcattcctttgatgtcctcaaaaaatcc
aagcatcccccaacgttccttgctgctggccggctttctgacatgctgaatggcggtgat
gaagtctatgctaactgcatggtgatagatcaggttgatgatttggatattagctatatt
aatatagagggaatcactgaaaatacttgccttgaatccatgggttccactctggggcct
cagagcagcaagtccatccttcctactgaaaccagcgctggcatgtacccaccaaatgag
aacacagaagtcacatcacacaccgaagcccaaccatctttcatgtcaccatctagttca
tatgcttccagtttgaatctttcttttggtcttcatggatttgaaaaggaacaaagtcat
ctaaagaaaagaagttccagccttgatgccctggatgctgacagtgaagaagaggggcat
tccgagcggttgcgcatttgctacactccagtgtctcagagttcctcgagaactggcatt
cctagtggggatgaattggactcttttgagaccagcactgaaccagattttaatatctcc
aggactgaatcactctctttatcaagtagcctgcagctgaaggaatcattgttttctgga
gtccgctcacgttcttattcctgctcatcacccaaaatttctttaggaaaaactcgattg
atccgtgactttacagtgtgcaattcagctgaagagcaaagagcttacagcttaccggag
ccaccaagagaaaaaagaattcaggaagaagaatgggataaatacatcgtacctgccaaa
tcagagtctgaaaaatacaaagtgagccgaactttcagcttcctcatgaacaggatgacc
agccctcggaataaatctaagacaaaaggcaaggatgccaaagacaaagagaaactgagt
cgacatcagtttgtccctggaacattctctgggtctctgcagtgtttggtttgtgataaa
acgctcctgggaaaagagtcgttccagtgttccaactgtaatgcaaatgtacataagggc
tgtaaagatgccgcctctccgtgtaccaagaaattccaagtgaaatataataagaacaaa
ccacagaccatccttggaaattcttcatttagagacgtcccacctcctgggctctccttg
cacccttcttcctccatgcctattgggctgccgaccgggaggaaggaaacagcagggcaa
gtccatccattgtccagaagcgttccaggcatgaccttggaaagcttcaggaggtcaggg
gcatccttggagtctgaaagtgatgggagcacctggagaagcaggtctcagtctgatgag
cttttccagcccatgggctcacctccctccacagactccttcttaatggaagatgtcgtg
gattcgtctctgtggagtgacctcagcagtgatgcccaggggtttgaagcagaatcttgg
agtctggtggtggacccctccttttgtagtaggcaggagaagggtgtcatcaaaagacag
gatgtcatttttgagctaatgcagacagaaatgcatcacatccagaccctgttcatcatg
tccgagatcttcaggaaagggatgaaggaggagctgcagcttgaccacagcactgtggat
aaaatcttcccctgtttagatgagttacttgaaatccacaggcatttcttctatagtatg
aaggagcgaaggcaagaatcctgtatcggcaacgataggaatttcgtcatcaaccgaatc
ggagatattctagtacaacagttttcagaagaaaatgcaaataaaatgaagaaaatatat
ggggaattctgtagccatcacaaggaggctgttagcctctttaaagaactccagcagaat
aaaaagtttcagaattttattaagctccgaaatagtaatcttttggctcgacgccgagga
attccagaatgcattctgctggtcactcagcgcatcacaaaataccctgtcttggtggaa
aggatattgcagtacacaaaggagagcactgaagaacagaaagacttatgcaaagctctt
tgcttaattaaagacatgattgcagctgtggatttaaaagtcagcgaatatgagaaaaaa
caaaagtggcttgagatcctaaataagattgaaaacaaaacatataccaagcttaaaaat
ggccacgtgtttaggaaacaggcactgatgagtaaagaaaggaccctgttatacgatggc
cttgtttattggaaaaccgctacgggtcgtttcaaagatatcctagctctgcttctaact
gatgtgctgctctttttacaagaaaaagaccagaagtacatctttgcagctgttgatcag
aagccatcagttatttcccttcagaagctcattgctagggaagttgcgaatgaggagaga
gggatgtttctgatcagtgcttcatctgctggtcctgagatgtatgaaattcataccaac
tccaaggaggaacggaatacctggatgaggcggatccaacaggcagtagaaagttgccca
gaagaagaagggggaaggacaagtgagtctgacgaagagaggcggaaagctgaagccaga
gtggccaaaattcagcaatgtcaagaaatactcagtaaccaagaccaacaaatttgcaca
tatttggaagagaagctgcatatctatgctgaacttggagaactgagtggatttgaggat
gtccatctagagccccacctcctcattaaaccagaccctggagagcctccccaggcagcc
tcattactggcagcagcactgaaagaagccgagagccttcaagttgcagtgaaggcctcc
cagatgagcaatgcatgtcagtcacccaaggaaggttgtggagaacctgctttgcaggat
gtgttcagttctcaggacgcatccggatcgcctactgcttcactagtcacagaagggaca
ggaggaagaggctgttgggatgtggatcctgggacccagggtgtgggaaccgacctggcg
gtctctgatgcaggggagaaggtggaatatagaagtttcccaggttcttcacagtcagag
attatacaagcgatacagaatttaacccgtctcttatatagccttcaggccgccttgacc
gttcaggatagccacattgaggtccacaggctggctctccagcagcaggagggcctgtcc
cccggcccctctttccgaggcagcccctttcaggaccaggagaagcaccgaagcctggag
aagcggcaggaggagttggccagcctccacaagctgcagcatcggttccagcaggaccag
cagcgctggcgccgcaggtgcgaccagcagcagcgagagcaggaggccaaggccagccgg
ctgcaggagcgcgagaggcagtgccggctgcaggaggagctgctgctgagcagccggggg
cagctggaccagcagctccaggagtaccagcagaacctggagcggctgcgggagggccag
cgcctggtggagagggagagggagcggatgcgggcccaacagagcctgctgcgtggctgg
aagcacagccggcagaggagccttcccgcggcgttgcctccaggaggcgtggaggtaatg
gaacttaatcaatctgagggtttatgtcatgaaaattcactcttcatcaatgaagcttta
gtgcaaatgtcacttaacaccttgaacaaaccgactccagcagatatccatcaggatgcc
acttaccccccaagtatatctcattccgatttggtaaggactagtgaaaatcaagtagac
ctcaagatgaacatttctcagcccttggatgtcagccatgaactgtggatagccgctggg
tcctgtcatcagataccccctctccaccagagcagcaaggattcttgtaaaaatgatttg
gatctctctcagactgcatacccacccccccaggactcaaatccgcatggccctcagctg
caaacgttcatagcagaagcaaagctaaatctacagagagtaaccagacaagatggggaa
actggagatggaacagaagaaaccattgtttacctctaa
DBGET
integrated database retrieval system
