Physeter macrocephalus (sperm whale): 102993232
Help
Entry
102993232 CDS
T06011
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcad01009
]
102993232 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102993232 (VPS54)
Protein phosphatases and associated proteins [BR:
pcad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102993232 (VPS54)
Membrane trafficking [BR:
pcad04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
102993232 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
SBP_bac_6
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
102993232
NCBI-ProteinID:
XP_007111985
Ensembl:
ENSPCTG00005007443
UniProt:
A0A2Y9EZR2
LinkDB
All DBs
Position
12:complement(78929546..79038782)
Genome browser
AA seq
977 aa
AA seq
DB search
MASSHSSSPVPQGSSSDVFFKKEVDPTKHIRPVQSLPDVCPKEPTGDSNSLCVAPSLVTD
QHRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVY
QQEISQREKIHERCKKICPPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFN
SVLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLKKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQ
PTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YSHSDLNRPLEDDCQILEEERLVSLVFGLLKQRKLNFLEIYSEEMIITAKNIIKQCVINK
VSQIEDIDTDVVLKLADQMRMLNFLQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVL
DKNQRTRELEEISQQKNAAKDNSLDTEVAYLIHEGMFISDAFSESELTPIAIDTTSQRNA
SPNSEPCSSDSVSEPECTTDSSSSKEQTSSSVTPGAVDIMVNEDMKLTDLELGKLANNVQ
ELLYSASDICHDRAVKFLMSRAKDGFLEKLNSTEFITLSRLMETFILETEQICGRKSMSL
LGALQGQANKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSIADGKIALPEKKS
WATEERKPAEVLIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYF
NSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLQPKQYSML
RHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEA
IFDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALK
GLKDLDLNMAEIWEQKR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagccacagttcttcaccagtgcctcaaggaagcagcagtgatgtttttttt
aaaaaagaggtagacccgacaaaacacattcgacctgtgcagtcactgccagatgtgtgt
cccaaggaacccacaggtgattcaaatagtttatgtgttgccccatctctagttacagat
caacatagatggactatatatcattccaaagtaaatctcccagcagcattaaatgatcct
agattagcaaaaagagaatctgacttcttcacaaaaacatggggattggactttgtggac
actgaagtcataccttcattctacctcccacagatcagcaaggaacattttacagtatat
caacaggaaatctctcagagagagaagattcatgagagatgcaagaaaatttgtcctcct
aaagatacctttgacaggactctcttacatactcatgataaatccaggacagatctggag
caagtacctaagatttttatgaaaccagattttgccttggacgattccttaacttttaat
tcagttttaccatggtctcattttaatactgctggtggaaaaggaaatcgtgatgcagct
tcctcaaagttgctacaagaaaagctgagccattatctggatattgtggaagtaaacatt
gctcaccagatctctctacgttcagaagcattttttcatgcaatgacctctcaacacgaa
ttgcaggactacctcaagaaaacttcccaggctgtaaaaatgcttcgagataaaattgca
cagattgataaagtaatgtgtgaaggatcactacacattttaagactggcacttaccaga
aataattgtgttaaagtatacaataaactgaaattaatggccactgtacaccagactcag
cctacagtgcaggtgttgttatctacttctgaatttgtcggagcattggacttaatagca
acaacgcaagaggttctacagcaggaacttcagggcattcacagcttccggcatttggga
tcacagctttgtgaattagaaaaactgatagataaaatgatgattgcagaattttctact
tattctcacagtgacttaaatagaccattggaagatgactgtcaaattttagaagaggaa
agactagtatctcttgtatttggacttttaaaacaaagaaaacttaattttttagaaata
tatagtgaagaaatgattattacagcaaagaatatcattaaacagtgtgtgattaataaa
gtttcacaaatagaagacatagacacagatgttgttttgaagcttgcagatcagatgaga
atgttgaattttcttcagtggtttgatctgctaaaggatattttctctaagtttacaatt
ttcctacagagagttaaggcaacattgaatatcattcacagtgttgttctctcagttctt
gacaaaaaccaaaggactagagaattggaggagatttcgcagcagaagaatgctgcaaaa
gacaattcactggacacagaggtggcttatttaatccatgaaggcatgtttataagtgat
gcattcagtgagagtgaattaacacctatagcaattgacactacctctcaaagaaatgca
tctccaaatagtgagccctgcagcagtgattcggtatccgaaccagaatgtactactgat
tcttcatccagcaaagagcagacatcatcatctgttactccaggagctgtggatattatg
gtcaatgaagacatgaaattaaccgacttagagctgggaaagctggcaaataatgtccag
gagttattatatagtgcctcagatatatgccatgatcgagctgtcaaatttctcatgtca
agagcaaaggatggttttcttgagaagctaaattccacagaattcataacactttccaga
ttaatggaaacattcattttggaaactgaacagatctgtggaagaaaaagcatgtcatta
cttggagcacttcagggccaagctaataaatttgtaaacaggtttcatgaagagagaaaa
accaagctcagcctcctcttagacaatgagcgctggaagcaagctgatgttcccgcagaa
tttcaggatcttgttgattctatagcagatggaaagattgctttacctgaaaaaaaatca
tgggctacggaagaaaggaaaccagcagaagttctcattgtcgagggacaacagtatgct
gttgttggaaccgtattgctgttgataagaattatccttgaatattgccagtgtgtggat
aatatcccatctgttactactgacatgctcactcgtctctcagatttattgaagtacttc
aattcaagaagttgccagttagttcttggagctggtgcactgcaagttgttggactaaaa
acaataactacaaaaaatttggctctttcttcacgctgtttgcagttaattgtgcactac
attcctgtgatcagggctcattttgaagctcgactgcagcctaagcagtatagtatgctt
aggcattttgatcatatcactaaggactaccatgaccacatagctgaaatatcagctaag
cttgtagcgataatggatagcttatttgacaagctgttatctaagtatgaagtgaaagct
cccgttccttctgcctgtttcaggaatatttgtaagcaaatggcaaaaatgcatgaagct
atttttgatctccttccagaagaacaaacacaaatgttatttttaagaattaatgcaagt
tacaaactccacttgaaaaagcaattatctcacttaaatgtgataaatgatggaggacct
caaaatgggttggtcacagcagatgtagctttttacactggaaatcttcaagccttaaaa
ggccttaaagatttggacctaaatatggctgagatctgggaacagaaaaggtga
DBGET
integrated database retrieval system
