Physeter macrocephalus (sperm whale): 102993357
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Entry
102993357 CDS
T06011
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102993357 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcad03036
]
102993357 (SMARCAD1)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102993357 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
CUE
ERCC3_RAD25_C
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
102993357
NCBI-ProteinID:
XP_007100307
Ensembl:
ENSPCTG00005003209
UniProt:
A0A2Y9EEZ7
LinkDB
All DBs
Position
7:14693167..14763478
Genome browser
AA seq
1027 aa
AA seq
DB search
MNLFNLDRFRFEKRSKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSRAGTPDSDIT
EKTEDSSVPETPENERKASVSYFKNQRGIQYIDLSSDSEDVSPDCSSTAQEKKFSKDTVI
IVSEPSEDEESQDLPATAGRNNSDISELEDLSELEDLKDAKLQTLKELFPQRSDSDLLKL
IESTSTMDGAIAAALLMFGDAEGGGPRKRKLSSSSEPFEEDEFNDDQSMKKKRLDQGEES
NESAESSSNWEKQESIVLRLQKEFPNFDKEELREVLKEHEWMYTEALESLKVFAEDQDMQ
YASPSEFPNGKEVSSRSQNYPKNAVKTKLKQKCSMKPQNGFNKKRKKNVFNPKRVIEDSE
YDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELR
PFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTGN
GGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYL
YQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSRYEEYNV
IVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTP
VQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFI
LRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNMEKNTEMCNVMMQLR
KMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRH
INNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLR
LDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQA
EDRCHRVGQTKEVLVIKLIGQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIATL
LKTSMGL
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacctggaccgttttcgctttgagaaaaggagtaagattgaggaagcg
cccgaagcaacccctcaaccctcccagcctggcccttcttcaccaatttctcttagtgct
gaagaggagaatgctgaaggggaagttagcagggcaggcacccctgattcagatataact
gaaaaaacagaagattctagtgttccagaaaccccagaaaatgaaagaaaagcaagtgta
tcatatttcaagaatcaaagaggaattcagtatattgatttgtcttcagatagtgaagat
gtttccccagattgctccagcacagctcaagagaaaaaattcagcaaagacacagtgatt
atagtttccgagccatctgaagatgaagagtcccaagacctccctgccacggcaggtaga
aataacagtgatatttcagaattggaagacctttcggaattggaagaccttaaagatgct
aaacttcagaccctgaaggaactttttccacagagaagtgacagtgatttacttaagtta
attgaatcaaccagcactatggatggagcaattgctgctgccttgctgatgtttggtgat
gcagaaggtggtggacccaggaaaagaaaattatcttcttcttcagagccatttgaggaa
gatgaatttaatgatgatcaatctatgaaaaagaagagattggatcaaggagaggagtca
aatgagtctgcagaatctagcagtaattgggaaaaacaggaaagcattgtgttgagattg
caaaaggaatttcccaattttgataaagaggaattaagggaagtactcaaggaacatgaa
tggatgtacacagaggctttagaatctttaaaagtgtttgcggaagaccaagatatgcaa
tatgcttcaccaagtgagtttccaaatggaaaagaagtttcttcaagaagtcaaaattat
cctaaaaacgcagttaaaacaaaactgaaacagaaatgttccatgaaaccacaaaatggt
tttaacaagaaacgtaaaaaaaatgtatttaatcctaaaagagttattgaagactctgaa
tatgattcaggttctgatgttggtagttcattagacgaggactatagtagtggtgaagaa
gtgatggaggatggctataaaggtaaaatccttcacttccttcaagatgcttcaattggt
gaacttactttgattcctcagtgttctcagaaaaaggctcagaagataacagaactccgg
ccctttaatagttgggaagctctgttcacaaagatgtccaaaacgaatggcttatcagaa
gatttgatatggcactgtaaaacgctgatccaagaaagggatgtagttataaggcttatg
aacaaatgtgaagacatttcaaataaattgacaaaacaagttaccatgctcactggaaat
ggaggtggatggaacatagaacaaccctccattctaaaccaaagtttgtcactcaagccc
tatcagaaggttggtttgaattggctggcattggtacataaacatggacttaatggcatt
ttggcagatgaaatgggcctgggaaaaactattcaagcaattgcattcctagcgtacctc
tatcaggagggtaataaaggtcctcatttgattgttgttccagcatcaactatagataac
tggctaagggaagttaatttatggtgccccactttaaaggtgctctgttactatggttct
caagaagaacgtaaacagattagatataacattcatagtagatacgaagaatacaatgta
atcgtgaccacgtataattgtgcaatcagcagttctgatgatcgtagtctgtttcgtcgg
ctgaaattgaattacgcaatttttgatgagggccatatgctgaagaatatgggctccatc
cgctaccagcaccttatgacaattaatgcaaataaccgtttgctgctcacaggcacacct
gtgcagaataacctgttagaactcatgtcgctgttgaattttgttatgccgcacatgttc
agtagtagcaccagtgaaatacgaagaatgttttcttctaagacaaaaccagcagatgag
caaagtatatatgaaaaggagagaatagcacatgcaaaacaaattataaaaccatttatt
ctcagaagagtaaaagaagaggttctcaagcagctaccccccaaaaaagatcgaattgag
ttgtgtgcaatgtcagagaagcaggagcagctctatttgggtcttttcaacagattgaaa
aaatctatcaataacatggaaaaaaacacagaaatgtgcaatgtcatgatgcaattgaga
aaaatggccaatcatcctttattacatcgccaatattacacagctgaaaaactcaaggaa
atgtctcagcttatgctaaaggaacctacacattgtgaggctaaccctgacctgatcttt
gaagatatggaagttatgacagactttgaattacatgtactttgtaaacagtatcgacac
attaataacttccagttagacatggacttgattttagattctggaaaatttcgagtttta
ggctgcatcttgtctgaattgaaacagaagggtgatagagttgtattatttagccaattt
accatgatgctggatattttagaggttctcttaaaacatcatcaacataggtacctcaga
ttagatggaaagactcagatttctgaaaggattcatctaattgacgagtttaataccgat
atggatatctttgtgtttctgctgtcaacaaaagctggtggcctgggaataaacctgact
tcagcaaatgttgttatacttcatgatattgactgtaatccttacaatgacaaacaagca
gaagatagatgccatagagtaggccagactaaagaagtactagttataaaattaataggc
caagggacaatcgaagaatccatgctaaaaattaatcaacagaaattgaaactagaacaa
gatatgaccacagtagatgaaggtgacgaagggagtatgccagcagatatagccacatta
ctaaaaacatcaatgggcctgtga
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