Physeter macrocephalus (sperm whale): 102993394
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Entry
102993394 CDS
T06011
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcad03000
]
102993394 (CTCF)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102993394 (CTCF)
Transcription factors [BR:
pcad03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102993394 (CTCF)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102993394 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
102993394
NCBI-ProteinID:
XP_023980644
Ensembl:
ENSPCTG00005012353
UniProt:
A0A2Y9SXZ5
LinkDB
All DBs
Position
17:37607600..37655379
Genome browser
AA seq
727 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDTCHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGAVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTN
QPKQTQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEEPQPAATDAPNGDLTPEM
ILSMMDR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcggttgaagccattgtggaagagtctgaaactttcattaaaggaaag
gagagaaagacttaccagagacgccgggaagggggccaagaagaggacacttgccaccta
ccccagaaccagactgacgggggtgaggtggtccaggatgtcaatagcagtgtacagatg
gtaatgatggaacagctggatcctacccttcttcagatgaagactgaagtaatggagggt
gcagttgctccagaagcagaggctgctgtagacgatacccagattataaccttgcaggtt
gtaaatatggaggaacagcctataaacataggagagcttcagcttgtgcaagtacccgtt
cccgtgactgtacctgttgctaccacttcagtagaagaacttcagggggcttatgagaat
gaagtgtctaaagagggccttgcagaaagtgaacccatgatatgtcacaccttacctttg
cctgaagggtttcaagtggtaaaagtgggggccaatggagaggtggagacgctagagcaa
ggggaacttccgcctcaggaagatcctagttggcaaaaagacccagactatcaaccacca
gccaaaaaaacaaagaaaaccaaaaagagcaagctgcgttacacggaggagggcaaagat
gtggatgtgtctgtgtacgattttgaggaagagcagcaggagggcctgctgtcagaggtt
aacgcagagaaagtggttggtaacatgaagcctccaaaaccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgagctttgcagttacacatgtccacggcgttcaaat
ttggatcggcacatgaaaagtcacactgatgagagaccacacaagtgccatctctgtggc
agggcattcaggacagtcacccttctgaggaatcaccttaacacacacacaggtactcgt
cctcacaagtgcccagactgcgacatggcctttgtgactagtggagaattggtgcggcat
cgtcgttacaaacacacccatgagaagccatttaagtgttccatgtgtgattacgccagt
gtagaagtcagcaaattaaaacgtcacattcgctctcacactggagagcgtcctttccag
tgcagcttatgcagttatgccagcagggacacatacaagctgaaaaggcacatgagaacc
cattcaggggaaaaaccttatgaatgttatatttgtcatgcacggtttacccaaagtggt
accatgaagatgcacattttacagaagcacacagaaaatgtggccaaatttcactgtccc
cactgtgacactgtcatagcccgaaaaagtgatttgggtgtccacttgcgaaagcagcat
tcctacattgagcagggcaagaaatgccgatactgcgatgctgtgtttcatgagcgctat
gccctcatccagcaccagaagtcacacaagaacgagaagcgctttaagtgtgatcagtgt
gattacgcttgcagacaggagaggcacatgatcatgcataagcgcacccacacgggggag
aagccttatgcctgcagccattgcgacaagaccttccgccagaaacagctccttgacatg
cacttcaaacgctatcatgaccccaacttcgtccccgcggcctttgtctgttctaagtgt
gggaaaacatttacacgccggaataccatggcaagacatgctgataattgtgctggtcca
gatggtgtagaaggggaaaatggaggagaaacgaagaagagtaaacgtggaaggaaaaga
aagatgcgctctaaaaaggaggactcctctgacagtgaaaatgctgagccagacctggat
gacaatgaggatgaggaggagcctgccgtggagattgaacccgagccagagcctcagcct
gtgaccccagccccaccacctgccaagaagcggagaggacgcccccctggcagaaccaac
cagcccaaacagacccagccaacagccattattcaggtcgaagaccagaatacaggtgca
attgagaacattatagttgaagtcaaaaaagagccagacgcagagcccgcggagggggag
gaagaggagccccagccggccgccacagacgcccccaacggagacctcacgcccgagatg
atcctcagcatgatggaccggtga
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