Physeter macrocephalus (sperm whale): 102993456
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Entry
102993456 CDS
T06011
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04612
Antigen processing and presentation
pcad05145
Toxoplasmosis
pcad05152
Tuberculosis
pcad05164
Influenza A
pcad05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
102993456 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102993456 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
102993456 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
102993456 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
102993456 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcad01001
]
102993456 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pcad04054
]
102993456 (CIITA)
Enzymes [BR:
pcad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102993456 (CIITA)
Protein kinases [BR:
pcad01001
]
Serine/threonine kinases: Other
TAF1 family
102993456 (CIITA)
Pattern recognition receptors [BR:
pcad04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102993456 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
Motif
Other DBs
NCBI-GeneID:
102993456
NCBI-ProteinID:
XP_028341966
Ensembl:
ENSPCTG00005018680
UniProt:
A0A455BDB0
LinkDB
All DBs
Position
Unknown
AA seq
1109 aa
AA seq
DB search
MELGPLEGGYLDLLNSNADPLQLYHLYDRMDLAGEEEIELCSEPDTDTINCEQFSRLLCD
MEGDEETREAYANIAELDQYVFQDSQLEGLSKDIFVEHIGLEEMISESVEVLEEAGQKSQ
KRPFPEELPVDLKHRKLAEPLAMPVVTGAFLVGLVSDSSAQPCPSPPALFNKEPASSQTR
LKDTGMLGVPPSSSLLSCLSLPAGPIQIIPTLSTLPQGLWQISGAGTGVSSIFIYQGEMP
QASQTPASSSTAVHSLPKSPDRPGSTSPFAPSAADLPSMPEPALTSRANLTEDEMSPTQC
PAAHEASSKLPKWPESVEQFYCSLRNKYQAKPAGPEGILVEVDLVRVRLERSGGKSQDRE
LTTLDWAEQQPARGSLGEVLLASSNHRRPCETQVIAVLGKAGQGKSHWVQAVSWAWACGQ
LPQYDFIFCIPCHCLDRPGDTYRLQDLLFSLGSQPLSVDDEVFSYILRRPDRILLILDAF
EELEAQDGFLHSAGGPMSAKACSLRRLLAGLFQRKLLCGCTLLLTARPRGRLAQSLSKAD
ALFEVAGFSAQQAETYVMRYFECSGATEHQKRALALLQSQPFLLSHSHSPTVCRAVCQLS
EALLELGDEAQLPSTLTGLYVGLLGPGARDSPPGALVGLARLAWELGRSHQSSLREGQFP
SAEVRAWAVTQGLVQPTPGAPQTELAFSSFLLQCFLGAVWLALSSEIKDKELPQYLALTP
RKKRPYDNWLEGVPRFLVGLVFQPRVRCLGALAGLAASTSADRKQKVLTRYLKRLQPGML
KAGRLLELLHCAHEALDAGLWQHVLQGLPAHLSFLGTRLTPPDTHVLGSALEATGRDFSL
DLRSTGVDPSGLGSLVGLSCVTHFRAALSDTVELWESLQQHGEAKLLRAVKEKFTIEPFK
AESMKDVEDLGNLVQIQRTRSSSEDTPGELPAVRDLRKLEFALGPVLGPQAFPKLVKILE
AFSSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDLGACKLAEALPL
LAASLLRLSLYNNCICDVGAESLAHVLPDMVSLRVLDVQYNKFTAAGAQQLTASLRKCPH
VEKLAMWTPTIPFGVQEHLQQLDSRIILR
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggagttggggcctctagagggcgggtacctggatcttctcaacagcaatgctgaccct
ttacagctctaccacctctatgaccggatggacctggctggagaagaagagatagagctc
tgctcagaacctgatacggacaccatcaactgcgaacagttcagcaggctgttgtgtgat
atggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactggaccagtat
gtcttccaggactcccagctggagggcctgagcaaagacattttcgtcgagcacatagga
ctggaagaaatgatcagcgagagtgtggaggtgctggaggaagcgggacagaaaagtcag
aaaagacccttcccagaggagctgcctgtggatctgaagcacaggaagctagctgagccc
ctagccatgcccgtggtgactggtgctttcctggtggggctagtgagcgactcttcagct
cagccctgcccgtcaccacctgctctgttcaacaaggagccagcatccagccagacccgg
ctgaaggacaccggtatgttaggggtgcccccttccagttccttgttgagctgcctgagt
ctccctgctggacccatccagatcatccccactctctccactctgccccaggggctctgg
caaatctcaggggctgggacaggggtctccagtatattcatctaccaaggtgagatgcct
caggccagccaaacacccgcctccagcagcacagctgtccacagcctcccgaagtcccca
gaccggcccggctccaccagcccctttgccccatcggcagctgacctccccagcatgcct
gaaccagccctgacctcccgtgcaaacctaacagaggatgagatgtcccccacccaatgc
ccagcagctcacgaggcctccagcaagcttcccaagtggcctgagagtgtggaacaattc
tactgctcgctacggaacaagtaccaggctaagcccgcaggcccggaaggcatcctggtg
gaggtggacctggtgagggtaaggctggagaggagcggcggcaaaagccaggacagagag
ctgaccaccctggactgggcagagcagcagccggcccgaggaagtctgggcgaggtgctg
ctggcctctagcaaccaccggcggccatgtgagacgcaggtgatcgccgtgctgggcaaa
gcaggacaggggaagagtcactgggtccaggccgtgagctgggcctgggcctgcggccag
ctgccacagtacgactttatcttctgcatcccctgccactgtttggaccgtccgggggac
acctaccgcctgcaggatctgctcttctccctgggttcacagccactgtcagtggacgac
gaggtcttcagttacatcttgaggagacccgaccgcattctgctcatcctggatgccttc
gaggagcttgaagcccaagacggcttcctgcacagcgcgggcggacccatgtcagcaaaa
gcctgctccctccggaggctgctggcgggcctcttccagcgcaagctgctgtgcggctgc
accctgctgcttacagcccggccccggggccgcctagcccagagcctgagcaaggccgac
gccctgttcgaagtggccggcttctccgcccagcaggccgagacctatgtgatgcgctac
tttgagtgttcgggggccaccgagcaccaaaagagagccctggcgctcctccagtcccag
ccatttctcctgagtcacagccatagccccactgtgtgccgggccgtgtgccagctctca
gaggccctcctggagctaggtgatgaggcccagctgccttccacgctcacgggcctctat
gttggattactaggcccaggagcccgtgacagccccccaggggccctggtgggactggcc
aggctggcctgggagctgggccgcagtcaccagagcagcctgcgggagggccagttccca
tcggccgaggtgagggcctgggctgtgacccaaggcttggtgcagcccaccccaggggcc
ccgcagaccgagctggccttctccagcttcctcctgcaatgcttcctgggggccgtgtgg
ctggctctgagcagcgaaatcaaggacaaggagctgccgcagtatttggcattaaccccg
aggaagaagaggccctatgacaactggctggagggcgtgccgcgctttctggtcgggctg
gtcttccaacctcgtgtccgctgcctgggagccctggcagggctggcggcctccacctca
gcagacaggaagcagaaggtgctcaccaggtacctgaagcggctgcagcctgggatgctg
aaggcggggcggctgctggagctgctgcactgcgcccacgaggcgctggatgctgggctt
tggcagcatgtgctgcaggggctcccggcccacctctcattcctgggcacccggctcaca
cctcccgacacccacgtgctgggcagtgccttggaggcgacgggccgagacttctccctg
gacctccgcagcactggtgttgacccctctggactggggagcctcgtgggacttagctgt
gtcacccatttcagggctgccttgagtgacacagtggagctgtgggagtccctgcagcag
catggggaggccaagctactccgagcagtgaaggagaagttcaccatcgagcctttcaag
gctgaatccatgaaggatgtggaagacctgggcaacctcgtgcagatccagaggacaaga
agttcctctgaagacacgcctggggaactccctgccgtccgagacttaaggaagctggag
tttgcgctgggccccgtcttgggccctcaggcttttcccaaactggtgaagatccttgag
gccttttcttcccttcagcatctggacctggactcgctgagtgagaacaagatcggggac
gagggtgtcgcccagctctcggccaccttccctcagctgaaggccctggagacgctcaat
ttgtcccagaacaacatcactgacttgggtgcctgcaagctggccgaggccctgcccttg
ctggctgcgtccctcctcaggctgagcttgtacaataactgcatctgcgacgtgggagcc
gagagcctggcacacgtgcttccagacatggtgtccctccgggtgctggacgtccagtac
aacaagttcacagctgccggggcccagcagctcaccgccagcctgagaaagtgccctcac
gtggagaagctggcgatgtggacacccaccattccttttggcgtccaggaacacctgcag
cagctggactcaaggatcatcctgagatga
DBGET
integrated database retrieval system
