Physeter macrocephalus (sperm whale): 102993512
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Entry
102993512 CDS
T06011
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X2
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04140
Autophagy - animal
pcad04148
Efferocytosis
pcad05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102993512 (VPS18)
04148 Efferocytosis
102993512 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102993512 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102993512 (VPS18)
Membrane trafficking [BR:
pcad04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102993512 (VPS18)
Hops complex
102993512 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-C3HC4_2
zf-RING_16
zf-RING_5
zf-ANAPC11
zf-RING_2
KNOX2
zf-RING_UBOX
zf_RING_Vps8
zf-C3H2C3
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
102993512
NCBI-ProteinID:
XP_028351270
Ensembl:
ENSPCTG00005019641
UniProt:
A0A455BQL5
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Position
11:complement(97571862..97589108)
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AA seq
884 aa
AA seq
DB search
MELGRKDDAKVHKMFLDPTGSHLLIALSSTEVLYVNRNGQKVRPLARWKGQLVESVGWNK
ALGTESSTGPILVGTAQGQIFEAELSASEGGLFGPAPDLYFRPLYVLNEEGGPAPVCSLE
AERGPEGRGFVIATTRQRLFQFIGRAAEGAEAQGFSGLFAAYTDHPPPFREFPSSLGYSE
LAFYTPKLRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEERVWEYPEGVGPGASPPLAIV
LTQFHFLLLLADRVEAVCTLTGQVVLRDHFLEKFGPLKHMVKDSSTGHLWAHTERAVFRY
QVQREARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALT
QSYFEEIALKFLEAHQEEALAEFLQRKLASLKPAERTQATLLTAWLTELYLSRLGALQGD
PEALNLYRETRERFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERV
VAYHCQHEAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIELGSRLDARQLIPA
LVNYSQGGEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGAS
PHRVHYDLKYALRLCAEHGHHHACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDE
ELRKKLWLKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSL
KAYNHHIQELQQEMEEATASAQRIRRDLQELRGRYGTVEPQDKCATCDFPLLNRPFYLFL
CGHMFHADCLLQAVRPGLPAYKQARLEELQRKLGAAPPPAKGSARAKEAEGGAATAGPSR
EQLKADLDELVAAECVYCGELMIRSIDRPFIDPQRYEEEHLSWL
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggagctggggcgcaaggatgatgccaaagttcacaagatgttcctggaccctactggc
tctcacctgctgatcgctctgagcagcactgaagtcctctacgtgaaccgtaatggacag
aaagttcggcccctggcacgctggaaggggcagctggtggagagtgtgggctggaacaag
gccctgggtaccgagagcagcacaggccccatcctggtcggcactgcccaaggccagatc
tttgaagcagagctctcggccagcgagggtgggcttttcggccctgccccggatctctac
ttccgtccgttgtatgtgctaaatgaagaagggggcccagcacctgtgtgctccctcgag
gcggagcggggccctgaagggcgtggctttgtcatcgccaccactcggcagcgcctcttc
cagttcataggccgagcagccgagggagctgaggcccaaggcttctcggggctctttgct
gcctacactgaccacccacccccattccgtgagttccccagcagcctgggctacagtgag
ttggctttctacacccccaagttgcgctctgcaccccgggccttcgcctggatgatgggg
gatggcgtgttgtatggctcgttggactgcgggcgtcccgactccctgctgagcgaggag
agggtctgggagtacccagagggggtgggtcctggggccagcccacccctggccatcgtc
ctgacccagttccacttcctgctgctgctggcggaccgggtggaggcggtgtgcacgctg
acggggcaggtggtgctgcgggaccacttcctggagaagtttgggccactgaagcatatg
gtgaaggactcctccacaggccacctgtgggcccacaccgagcgggccgtcttccgctac
caggtacagcgggaggcccgggatgtctggcgcacctacctggacatgaaccgcttcgac
ctggccaaagagtattgccgagagcggcctgactgcctggacacggtcctggcccgggag
gccgacttctgcttccgccagcatcgttacctggagagtgcccgctgctacgccctgact
cagagctactttgaggagattgccctcaagttcttggaggcccaccaggaggaggcgctg
gccgagttcctgcagcgaaaactggccagtttgaagcctgctgagcgcacccaggccacg
ctgcttactgcctggctgacggagctctacctgagccgactcggggccctgcagggtgac
cctgaggccctgaacctctaccgggaaacccgggagcgtttccgcaccttcctaagcagc
ccccgccacaaggagtggctcttcgccagccgggcctccatccacgagctgctcgccagc
cacggggacacagagcacatggtatactttgctgtgatcatgcaggactacgagcgcgtg
gtggcataccactgccagcatgaggcctacgaggaggccctggccgtgctggcccgccac
cgtgacccccagctcttctacaagttctcacccatcctcatccgtcacatccctcgccag
ctggtggatgcctggattgagctgggcagccggctggatgcccggcagctcatccctgcc
ctggtgaactatagccagggtggcgaggcccagcaggtgagccaggccatccgctacatg
gagttctgcgtgaacgtgctgggagagactgagcaggccattcacaattacctgctgtcg
ctctatgcccgaggccagccagcctcgctgctggcctaccttgagcaggccggggccagc
ccgcaccgggtgcattatgacctcaagtacgcgctgcggctctgtgctgagcatggccac
caccatgcttgcgtccacgtctacaaggtcctggagctgtatgaggaggctgtggacctg
gccctgcaggtggacgtggacctggccaagcagtgtgctgacctgcccgaggaagatgag
gagctgcgcaagaagctgtggctgaagattgctcggcatgtggtgcaggaggaggaggat
gtgcagacggccatggcctgcctggccagctgccccctgctcaagatcgaggacgtgctg
cctttcttccctgacttcgtcaccatcgaccacttcaaggaggcgatctgcagctcgctg
aaggcttacaaccaccacatccaagagctgcagcaggagatggaagaggccacggccagc
gcccagcgcatccggcgagacctgcaggagctgcggggccgctatggcaccgtggagccc
caggacaaatgtgccacttgcgacttccccctgctcaaccgccctttttacctcttcctc
tgtggccacatgttccacgctgactgcctgctgcaggccgtgcggcctggcctgccggcc
tacaagcaggctcggcttgaggagctacagcgaaagctgggcgccgctccaccccctgcc
aagggctctgcccgggctaaggaggccgaggggggcgctgccactgcgggtcccagccgg
gaacagctcaaggctgacctggatgaactggtggccgctgagtgcgtgtactgtggggag
ctgatgatccgctctattgaccggcccttcatcgaccctcagcgctacgaggaggagcac
ctcagttggttgtag
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