Physeter macrocephalus (sperm whale): 102994254
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Entry
102994254 CDS
T06011
Symbol
NRXN1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102994254 (NRXN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102994254 (NRXN1)
Membrane trafficking [BR:
pcad04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
102994254 (NRXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
102994254
NCBI-ProteinID:
XP_023974525
Ensembl:
ENSPCTG00005014692
UniProt:
A0A2Y9SE03
LinkDB
All DBs
Position
12:complement(65776497..66924169)
Genome browser
AA seq
1531 aa
AA seq
DB search
MGTALLQRGGCFLVCLSLLLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFQLKT
RSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGAWHSVRIR
RQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPF
KGWIRDVRVNSSQALPVDSGEVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQ
AVCDCSRTGFRGKDCSQEDNHVEGLAHLMMGDQGKSKEDMNVEGDMAHKSTGDRRKEEYI
ATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLV
INLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISVDGILT
TTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLA
KQGDPKMKIHGVVAFKCENVATLDPITFETPESFVSLPKWNAKKTGSISFDFRTTEPNGL
ILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWY
HVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPENKAGLVFPTEVWTALL
NYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSRETAKPCLSNPCKNSGMCRDGWN
RYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPLVMHTEAEDVSLRFRSQRAYGILM
ATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVR
RGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIITERRYLSSVPSNFIGHLQSLTFNG
MAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTT
SLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRD
TSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASV
DLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSG
PLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGD
YLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIER
YPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQATIIIGGKEQGQPFQGQ
LSGLYYNGLKVLNMAAENDANIAIVGNVRLVGEVPSSMTTESTATAMQSEMSTSIMETTT
TLATSTARRGKPPTKEPISQTTDDILVASAECPSDDEDIDPCEPSSGGLANPTRAGGREP
YPGSAEVIRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSA
QSNGAVVKEKQPSSAKSANKNKKNKDKEYYV
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggggacggcgcttctccagcgcgggggctgctttctcgtgtgcctctcgctgctgctc
ctgggctgctgggcagagctgggcagcgggctggagttcccgggcgctgagggccagtgg
acgcgcttccccaagtggaacgcctgctgcgagagcgagatgagcttccagctcaagacg
cgcagcgcccggggcctagtgctctatttcgacgatgagggtttctgcgacttcctggag
ctcatcctgacgcgcggcggccgcctgcagctcagcttctccatcttctgcgccgagccc
gccacgctcctggccgacaccccggtcaacgacggcgcgtggcacagcgtgcgtatccga
cgtcagttccgcaacaccacgctcttcatcgaccaggtcgaggccaagtgggtggaggtc
aagtccaagcgccgggacatgacggtgttcagcggcctcttcgtcggggggctgcccccg
gaactgcgcgccgcggcgctcaagctcacgctggcctccgtgcgggagcgagagcccttc
aaagggtggattcgcgacgtgcgggtcaactcctctcaggccctgccggtggacagcggc
gaggtgaagctggacgacgagccgcccaacagcggcggcgggagcccgtgcgaggccggc
gaggagggcgagggcggggtgtgcctcaacggaggcgtgtgctccgtagtggacgaccag
gcggtgtgcgactgctcgcgaaccggcttccgcggcaaggactgcagccaagaagacaac
catgtggaaggtctggcgcacctgatgatgggcgaccaaggtaaaagtaaagaagatatg
aatgttgaaggggacatggcacacaaaagtacaggcgacagaagaaaagaagaatacatt
gccactttcaagggatctgaatacttctgctacgacttgtctcaaaaccccattcaaagc
agcagcgatgaaataactctgtcctttaaaacccttcagaggaatggactgatgcttcac
actgggaaatcagctgattatgtcaatctcgccctgaaaaatggagctgtctctctggtc
attaatttgggatcaggggcctttgaagcactagtggagcccgtgaatggaaagtttaat
gataatgcctggcatgatgtgaaagtcaccaggaatctgcgtcagcactcaggcattgga
cacgctatggtaaacaaactacattgttcggtgacaatatcagtggatgggattcttacc
acaacgggctacacgcaagaagattataccatgctggggtctgatgactttttctatgtt
ggaggcagtcccagcacagcagaccttcccgggtcaccagtcagtaacaactttatgggc
tgtctcaaagaggttgtgtataaaaataatgatgtaaggctggaattatctcgacttgcc
aagcaaggagacccgaagatgaagattcatggagtggtggcctttaaatgtgagaatgtt
gcaactttggacccaatcacctttgaaaccccagaatctttcgtctctttgcctaagtgg
aatgcaaagaaaacaggctccatatcatttgatttccgcacaacagagccaaatggcctc
atcttatttagtcatggcaaaccacggcaccaaaaagatgccaagcacccacagatgata
aaggttgacttctttgctattgagatgctggatggccacctctacctcctcctagacatg
gggtcaggtacaatcaaaatcaaagccctacagaagaaggtgaatgatggagagtggtat
catgtggacttccaaagagacggacgatcaggtaccatttctgtcaacactctgcgcaca
ccctacactgctcctggcgagagtgagattctggacctggatgacgagttgtacctgggg
ggcttgccagaaaacaaggccggcctcgtcttccccaccgaggtgtggactgcactgctc
aactatggctatgtgggctgcataagagatttgttcattgacggccagagcaaagatatc
cggcaaatggctgaagttcaaagtactgctggagtgaagccctcctgctccagggaaaca
gcaaaaccgtgccttagcaacccttgcaaaaacagcggcatgtgcagggatgggtggaac
agatatgtctgcgattgttccggaacaggctatcttggcaggtcctgcgagagagaagca
acggttctgagctatgatgggagtatgtttatgaaaatccagctcccgctggtgatgcac
acggaggctgaggatgtatccttacggtttcggtcccaacgtgcatatggcattctcatg
gcaaccacctccagagactcagcagacaccctccgcctggagctggacgcaggacgtgtg
aaactgacggtcaatctagattgtatcaggattaactgtaattccagcaaaggtcccgag
accctttttgccggctataacctcaatgataacgaatggcacacagtgcgtgtggttcgt
cgaggaaaaagtttaaagttaacggtggatgatcaacaggccatgacaggtcaaatggcg
ggggatcatacgaggctggagtttcataacatagagactggcatcatcacggaacgccgg
tatctgtcttctgttccctccaacttcattggacacctgcagagcctgacatttaatgga
atggcatacattgacttgtgtaaaaatggcgacatagattattgtgagctcaatgccagg
tttggcttcaggaacatcatagcagaccctgtcaccttcaagaccaaatcgagctatgtt
gccttagctacgttgcaagcctacacttctatgcatctttttttccagttcaagacaaca
tccctagatggactaattctgtataatagtggggatggaaacgactttattgtggttgaa
ttagttaaagggtacttacattacgtgtttgatttgggaaatggtgctaacctcatcaaa
gggagctcaaataaacctctcaatgacaatcagtggcacaacgtgatgatatcaagggac
accagcaacctccacactgtaaagattgacacgaaaatcacaacgcaaatcacagctgga
gccaggaacttggaccttaagagtgacttgtatataggaggagtggccaaggaaacatac
aaatccttgccgaaactcgtccatgccaaggagggctttcaaggctgcctggcatcagtt
gatctaaatggacggcttccggacctcatctcagatgctcttttctgcaatggacagatt
gagagaggctgtgaagggcccagcacaacctgccaggaggactcatgttccaaccaaggc
gtgtgcttgcagcagtgggacggcttcagctgtgactgtagcatgacctccttcagcggg
ccactctgcaatgaccctgggacaacgtacatctttagcaaaggtggtggacaaatcacg
tataagtggcctcctaatgaccggccaagtacacgagcagacagactggccatagggttt
agcactgttcagaaggaagctgtattggtgcgagtggacagttcttctggcctgggagac
tacctagagctgcatatacatcaaggaaaaatcggagttaaatttaatgttgggacagat
gacatcgccatcgaagagtccaatgcaatcattaacgatgggaaataccatgtagtccgt
ttcacgaggagtggtggcaatgccacgttacaggtggacagctggccagtgattgagcgc
taccctgcaggaaacaatgataacgagcgcctggcgattgctagacagcgaattccatat
cgacttggtcgagtagttgatgaatggctactcgacaaagggcgtcagctcacaatcttc
aatagccaagcaaccataataattggcgggaaagagcagggccagcccttccagggtcag
ctctctgggctttactacaatggcttgaaagttctgaatatggcagccgaaaatgatgcc
aacatcgccatagtgggaaatgtgagactggttggtgaagtgccttcctctatgacaact
gagtcgacagccactgccatgcagtcagagatgtccacgtcaattatggagaccaccacg
accctggctactagcacagccagaagaggaaagccccctacaaaagaacccattagccag
accacagatgacatccttgtggcctcagcggagtgtcccagcgatgacgaggacattgac
ccctgtgagccgagctcaggtgggttagccaacccaacccgggcaggcgggagagagcca
tacccaggctcagcagaagtgattcgggagtccagcagcaccacgggcatggtcgtgggg
atcgtagccgctgccgccctgtgcatcctcatcctcctctacgccatgtacaaatacaga
aaccgggatgaaggctcataccatgtggatgagagtcgaaactacatcagtaactcagca
cagtccaatggggctgtagtaaaggagaaacaacccagcagtgcgaaaagcgccaacaaa
aacaagaaaaacaaggataaagagtattacgtctga
DBGET
integrated database retrieval system