Physeter catodon (sperm whale): 102994592
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Entry
102994592 CDS
T06011
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear RNA export factor 2-like
KO
K14284
nuclear RNA export factor
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03008
Ribosome biogenesis in eukaryotes
pcad03013
Nucleocytoplasmic transport
pcad03015
mRNA surveillance pathway
pcad05014
Amyotrophic lateral sclerosis
pcad05164
Influenza A
pcad05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102994592
03015 mRNA surveillance pathway
102994592
03008 Ribosome biogenesis in eukaryotes
102994592
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102994592
05168 Herpes simplex virus 1 infection
102994592
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102994592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102994592
03009 Ribosome biogenesis [BR:
pcad03009
]
102994592
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102994592
mRNA cycle factors
Stress granule specific factors
102994592
Ribosome biogenesis [BR:
pcad03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
102994592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
Tap-RNA_bind
NTF2
U-box
Motif
Other DBs
NCBI-GeneID:
102994592
NCBI-ProteinID:
XP_023973196
UniProt:
A0A2Y9S3N5
LinkDB
All DBs
Position
21:79031950..79040975
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AA seq
507 aa
AA seq
DB search
MHMTLWRTRKPLEREMGEDTQDGTPGSWFMVTIPSGIKYDRTWLMNSIQSHCSDPFTPVD
IREDAEARRFHFMQNGAQFFVQEASTASALMDVSFKIFDEESRKVCIPVFVSPSAVPYSV
RDKLKPEEMEQLKLTLSKRFDVSQQALELQRLRLDLDLVYSDIDIILNQRSCMAATLQII
EKNFPELLSLNLSSNRLYQLDGVSDIIQMAPTVKILNLPKNKQKSVWELSKMQGLKLEEL
WLQGNTLCGTFPDQSTYVRAVRECFPKLLRLDGQELPLPVTIDVDTPYIVKPCKRSFLGS
DELKSLVLQFLQQYYLIHDYGDRQGLAGAYHEEACFSLTIPFHPEDPAPSSLCEYFKDSR
NMKNLKDPHLRVQLLKHTKRVILHTLCVLPKTQHDFSSFVVDMWFQMETMLCFSVSGVFK
EVEGSSXGCVRSFTRTFITIPASYSSLCIVNDELFVRDASSSETQSVFSIPVPTPTSSSM
HTLSQQQQDIMQASSTPPEKNLXWSQK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcatatgactctgtggagaacgagaaaacctctggagagagaaatgggggaggacaca
caagacggaaccccagggagctggttcatggtcacaattccttctgggataaagtatgac
aggacatggctaatgaactcaatccagagccactgcagtgaccccttcactccagtggac
ataagagaggatgccgaagccagacgcttccactttatgcaaaatggggctcagttcttt
gtccaggaagctagcactgcctctgcattgatggatgtcagcttcaagatttttgacgag
gagagccgaaaggtgtgcatacctgtctttgtcagcccctccgctgttccctactctgtg
cgggataagttgaagccagaagaaatggagcagctaaagctgaccttgagcaaacgattt
gatgtctcccagcaagctcttgaactccagaggctccgccttgacctagacttggtgtac
tctgatattgatataattctgaatcaaagaagctgcatggccgccaccctgcagatcatc
gaaaagaatttccctgagctgttgtccttgaacttgagcagcaacagactgtaccagctg
gatggtgtgtctgacattatacagatggcccccacggtcaagatcctgaacctccccaaa
aataagcaaaagtctgtgtgggagttgagcaagatgcaagggctgaagcttgaagagctg
tggctgcaagggaacacactgtgcggcaccttcccagaccagtccacctatgtaagggcc
gtcagagaatgtttcccaaagttgttacgcctggatggccaggagttaccgttaccagtt
accattgatgttgacactccctacatagtaaagccctgcaagcgcagcttccttggatct
gatgagctgaagagcctagtcctgcaattcctgcagcagtactacttgatccatgactat
ggagaccgacagggtctcgcgggtgcttatcacgaggaggcctgcttctccctgaccatt
cccttccaccccgaggacccagccccaagcagcttgtgtgagtacttcaaggacagcagg
aatatgaagaacctgaaggacccccaccttcgggtccagctgctgaagcacacaaaacgt
gtcattttgcacaccctctgtgtgttgcccaagactcagcatgacttcagctccttcgtg
gtggacatgtggttccagatggaaacgatgctctgcttctcagtcagcggggtgttcaaa
gaagtggaaggaagttcttagggctgtgtgcgttccttcactcggaccttcatcactatc
ccggccagctattccagtctgtgcatcgtgaatgacgagctgtttgtgagggatgccagc
tccagtgagacccagagtgtgttctccatcccagtgcctacacccacctccagctccatg
cacaccctctcccagcagcagcaggacatcatgcaggcatcctccaccccacctgagaag
aacctctagtggtctcagaagtga
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