Physeter macrocephalus (sperm whale): 102994692
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Entry
102994692 CDS
T06011
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04622
RIG-I-like receptor signaling pathway
pcad05161
Hepatitis B
pcad05162
Measles
pcad05164
Influenza A
pcad05168
Herpes simplex virus 1 infection
pcad05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102994692 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
102994692 (IFIH1)
05171 Coronavirus disease - COVID-19
102994692 (IFIH1)
05164 Influenza A
102994692 (IFIH1)
05162 Measles
102994692 (IFIH1)
05168 Herpes simplex virus 1 infection
102994692 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pcad04054
]
102994692 (IFIH1)
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102994692 (IFIH1)
Pattern recognition receptors [BR:
pcad04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
102994692 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
CARD
SWI2_SNF2
DUF3638
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102994692
NCBI-ProteinID:
XP_007105350
Ensembl:
ENSPCTG00005013599
UniProt:
A0A2Y9EMC0
LinkDB
All DBs
Position
2:complement(68195108..68253213)
Genome browser
AA seq
1023 aa
AA seq
DB search
MSSDGYTADKNFCYLISCFRARVKMYIQVEPVLDYLTFLPAEVKEQIQRTAATTGNMQAA
DLLLNTLEKGVWPLGWARMFVDALRLAGNPLAARYVNPELTDLPSPSFENAHDECLQLLN
LLQPTLVDKLLVTDVLDRCVEEELLTVEDRNRVSAAENNGNEAGVRELLKRIVQKENWFS
TFLTVLRQTGNYALAQELTGTDCYESNAESENLSPEDGPEVKEPLLLVTDQPSLEVWDIE
NNSLEPSFADSSVASESDTSLAEGSVSCLDESLGHNSNMGSDSGTMGSDSDEENEVQRAS
PESEMHLRPYQLEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASELGKVIV
LVNKVPLVEQHFHKEFEPFLKKWYHVTRLSGDTQLKITFPEVVKSHDVIISTAQILENSL
LNLEEGEDDGVQLSDFSLIIIDECHHTNKEEVYNNIMRRYLHQKLKNNRLEKENKPVIPL
PQILGLTASPGVGGAQKQAKAEEHILKICANLDAFTIKMVKENTNQLKDQIKEPCKKFVI
ADDTKEDPFKDKLLEIMTKIQTFCQISPMSDFGTQPYEQWLIQMEKTAAREGNRKDRVCA
EHLRKYNEALQINDTIRMIDAYNHLETFYNDEKEKKFAVLGDDSDESDDDGDDDEDAGDE
KKPLKLDETDGFLMTLFLENKKMLKKLAVNPEHENEKLTKLRNTIMEQYTRAEESARGII
FTKTRQSAYALSQWITENEKFAEVGIKAHHLIGAGHSSEFKPMTQNEQKEVISKFRTGKI
NLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAQRGSGVIER
ETVNDFREKMMYKAIDRVQNMKPEEYARKILELQMQSILEKQMKIRRSIAKQFKDNPSLI
SFLCKNCSVLACSGEDIHVIEKMHHVNMTPEFKKRYIVRGNKALQTKFADYQTNGEIICK
DCGQAWGTMMVHKGLDLPCLKIKNFVVVFKNNLTKKQYKKWVELPMTFPDLNYSEYCLFS
DED
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggatgggtataccgcagacaagaatttctgctatctcatttcgtgtttcagg
gcccgagtgaaaatgtacatccaggtagagccagtattggactacctgacctttctacct
gcagaggtgaaagagcagattcagaggacggccgccaccactgggaacatgcaggcagct
gatctgcttctgaacaccttggagaagggggtctggcccctcggctgggctaggatgttt
gtggacgccctccggctagcaggcaaccccttagccgcacgctacgtgaaccctgagctc
accgacttgccctctccatcctttgagaatgctcacgatgagtgtctccagttgctgaac
ctccttcagcccacattggtggacaagcttctggttacagatgtcttggatagatgtgtg
gaggaggagctgttgacagttgaagacagaaatcgggtttctgctgcagaaaataatgga
aatgaagcaggggtaagagagctactgaaaaggatcgtgcagaaagaaaactggttttct
acgtttctgactgttctgaggcaaacaggaaactatgcgcttgcccaggagttaacaggc
accgattgctatgaaagcaatgcagagtctgagaatttatcaccagaagatggtcctgaa
gtcaaagagcccctccttttagtcacagatcagcccagtctggaggtctgggacatagag
aataattcattggaaccgtcttttgcagattcttctgtagcttcagaatcagacacaagt
ttggcagaaggaagtgtcagctgcttagatgaaagtcttggacataacagcaacatgggc
agtgattcaggcaccatgggaagtgattcagatgaagagaatgaggtacaaagagcatcc
cctgagtcagaaatgcatctcaggccttaccaactggaagtggcccagccagccttggag
gggaagaatatcattatatgcctccctacaggaagtgggaaaaccagagtggctgtttac
attgccaaggatcacttggacaagaagaaaaaagcatctgaacttggaaaagttatagtc
cttgtcaataaggtaccattagttgaacagcacttccacaaagagtttgaaccatttttg
aagaaatggtatcatgttactagattaagtggtgatacccaattgaaaataacatttcca
gaagttgtcaagtctcatgatgttattatcagtacagctcaaatccttgaaaactccctt
ttaaacttagaagaaggcgaagatgatggtgtacagttgtcagacttttctctcatcatt
attgatgaatgccatcacaccaacaaagaagaagtctataataacatcatgaggcgttat
ttgcaccagaagttgaaaaacaacagacttgagaaagaaaacaaaccagtgattccctta
cctcagatactgggactgacagcatcaccaggtgttggaggggcccaaaagcaagccaaa
gctgaagaacacattttaaaaatatgtgccaatcttgatgcatttaccattaaaatggtg
aaagaaaatactaatcaacttaaagaccaaataaaggagccatgtaaaaagttcgtaatc
gcagatgacaccaaagaagatccatttaaagataaacttctagaaataatgacaaagatt
caaactttttgccaaattagtccaatgtcagattttggaactcaaccgtatgaacaatgg
ctcattcaaatggaaaaaacagctgcaagagaaggaaatcgcaaagatcgtgtttgtgca
gaacatctgaggaagtacaatgaggccctacaaattaatgatacaatccgaatgattgat
gcatataatcaccttgaaactttctacaatgatgagaaagaaaagaagtttgcagtccta
ggagatgacagtgatgagagtgatgatgatggtgatgatgatgaagatgcaggtgatgaa
aagaaacctttgaagctggatgagacagatggatttctcatgactttatttttggaaaat
aagaaaatgttgaaaaagctggctgtaaacccagaacatgaaaatgagaagctgaccaaa
ttgagaaacaccataatggaacaatatacaagggccgaggaatcagcacgaggaataatt
ttcacaaaaacacgacaaagtgcatatgccctttcccagtggattactgaaaatgaaaaa
tttgcagaagtaggcatcaaagcccaccatctgattggagctggacacagcagtgagttc
aagcccatgacacagaatgaacaaaaagaagtcattagtaaatttcgcacgggaaaaata
aatctgcttatcgctaccacagtggcagaagaaggtctggatattaaagaatgtaatatc
gttatccgttatggtctcgtcactaacgaaatagccatggtccaggcccgtggtcgagcc
agagctgacgagagcacctacgtcctggttgcccaaagaggctcaggagttattgaacgt
gagacagttaatgatttccgagagaaaatgatgtataaagctatagaccgtgttcaaaat
atgaaaccagaggagtatgctcgtaagattttggaattacagatgcaaagtatattggaa
aagcaaatgaaaatcaggagaagtattgcaaagcagttcaaggacaacccatcattaata
agttttctctgtaaaaactgtagtgtgctagcctgctctggagaagatatccatgtgatt
gaaaagatgcaccatgtcaatatgacaccagagttcaagaaacggtacattgtgagagga
aacaaagcactgcaaacaaagtttgctgactatcaaacaaatggagagataatctgcaaa
gactgtggccaagcttggggaacgatgatggtgcacaaaggcctagatttgccttgtctc
aaaataaagaattttgtagtggttttcaaaaataatttaacaaaaaaacaatacaaaaag
tgggtagaattaccaatgacatttcccgatcttaactattcagaatattgtttgtttagt
gatgaagattga
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