Physeter macrocephalus (sperm whale): 102994711
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Entry
102994711 CDS
T06011
Symbol
LINGO3
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102994711 (LINGO3)
Membrane trafficking [BR:
pcad04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
102994711 (LINGO3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
Ig_2
V-set
LRRNT
LRR_LRWD1
LRR_9
LRR_6
Sp38
Motif
Other DBs
NCBI-GeneID:
102994711
NCBI-ProteinID:
XP_007108239
Ensembl:
ENSPCTG00005019545
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MTCWLCVLSLQLLLLPAAPPPAGGCPARCECPAQMRAVACPRRRLTAVPDGIPAETRLLE
LSRNRIRCLNPGDLAALPLLEELDLSENVIAHVEPGAFANLPRLRVLRLRGNLLKLIPPG
VFTHLDNLTLLDLSENKLVILLDYTFQDLRSLRRLEMGDNDLVFISRRAFAGLLALEELT
LERCNLTALSGESLGHLRGLGALRLRHLAIAALEDQNFQRLPGLLHLEIDNWPLLEEVAA
GSLRGLNLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELH
LAGALLAVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSVNTLETLRVDGNPLACDCRL
LWIVQRRKTLNFDGRLPACATPAEVRGDALRNLPDSVLFEYFVCRKPKIRERRLQHVTAA
AGDDVRFQCRAEGEPAPTVAWVTPRHRAVTAASAGRARVLPGGTLQIRDARPGDSGTYTC
VASNAGGNDTYFATLSVQPEPAANRTPGEGRNDTQAAARFPLDLTTILVSTAMGCITFLG
VVLFCFLLLFVWSRGRGQHKNNFSVEYSFRKVDGPAAAAGQGGARKFNMKMI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgacctgctggctgtgtgtcctgagcctacagctcctgctcctgcccgcggccccgccc
cccgctgggggctgcccggcccgctgcgagtgcccagcgcagatgcgcgcggtagcctgt
ccccggcgccggctgaccgcggtgcccgacggcatcccggccgagacgcgcctgctagag
ctcagccgcaaccgcatccgctgcctgaacccgggcgacctggccgccctgccgctgctg
gaggagctggacctgagcgagaacgtgatcgcgcacgtggagcccggcgccttcgccaac
ctgccgcgcctgcgagtgctgcgcctccgcggcaacctgctgaagctcatccctcccggc
gtcttcacgcacctggacaacctcacactgctggacctgagcgagaacaagctggtcatc
ctcctggactacaccttccaggacctgcgcagcctccgccggctggagatgggcgacaac
gacctggtgttcatctcgcgccgggccttcgcggggctgctggcgcttgaggagctgacc
ctggagcgctgcaacctgacggcgctgtcgggcgagtcgctgggccacctgcggggcctg
ggcgctctgcggctgcggcacctggccatcgccgccctggaggaccagaacttccagcgg
ctcccgggcctgctgcacctggagatcgacaactggccgctgctggaggaggtggccgcc
ggcagcctccgggggctcaacctgacctcgctgtccgtcacgcacaccaacatcaccgct
gtgccggccgccgccctgcgccaccaggcccacctcacctgcctcaatctctcgcacaac
cccatcagcacggtgccgcgagggtccttccgcgacctggtgcgcctgcgtgagctgcac
ctggccggggccctgctggccgtggtggagccgcaggccttcctggggctgcggcagatc
cgcctgctcaacctctctaacaacctgctgtccacgctggaggagagcaccttccactcg
gtcaacacgctggagacgctgcgcgtggacggcaacccgctggcctgcgactgtcgcctg
ctctggatcgtgcagcgccgcaagaccctcaacttcgacggccgcctgccggcctgcgcc
accccagccgaggtccgcggcgacgcgctgcgcaacctgccggactcggtgctcttcgag
tacttcgtgtgccgcaagcccaagatccgcgagcggcggctgcagcatgtcacggcggcc
gcgggcgacgacgtgcgcttccagtgccgcgccgagggcgagccggcgcccaccgtggcc
tgggtgacgccacgccaccgcgcggtgaccgccgccagcgccggacgggcgcgcgtgctg
ccgggcggcacgcttcagatccgggacgcgcggccaggggacagcggcacctacacgtgc
gtggccagcaacgcgggcggcaacgacacctacttcgccacgctgagcgtgcagcccgag
ccagccgccaaccggaccccgggtgagggccgcaacgacacgcaggcggccgcgcgcttc
cctctggacctcaccaccatcttggtgtctaccgccatgggctgcatcaccttcctgggc
gtcgtgctcttctgcttcctgctgctcttcgtgtggagccgcggccgcgggcagcacaag
aacaacttctcggtggagtactctttccgcaaggtggacgggcccgccgcggctgccggc
caggggggcgcccgcaagttcaacatgaagatgatctga
DBGET
integrated database retrieval system
