Physeter macrocephalus (sperm whale): 102995537
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Entry
102995537 CDS
T06011
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X2
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03018
RNA degradation
pcad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102995537 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
102995537 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102995537 (LSM7)
03041 Spliceosome [BR:
pcad03041
]
102995537 (LSM7)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102995537 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
102995537 (LSM7)
Spliceosome [BR:
pcad03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102995537 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
102995537
NCBI-ProteinID:
XP_023990195
Ensembl:
ENSPCTG00005019559
UniProt:
A0A2Y9TL16
LinkDB
All DBs
Position
Unknown
AA seq
103 aa
AA seq
DB search
MADKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDA
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaagagaagaaaaagaaggagagcatcttggacctgtccaagtacatcgac
aagacgatccgagtgaagttccagggaggccgagaagccagtggaatcctgaaagggttt
gacccgctgctcaacctcgtgctggatggcaccatcgagtacatgagagaccccgacgac
cagtacaagctcacggaggacacccggcagctgggcctggtggtgtgcaggggcacctcc
gtggtgctcatctgcccacaggacggcatggaagccatccccaaccccttcatccagcag
caagacgcctag
DBGET
integrated database retrieval system
