Physeter macrocephalus (sperm whale): 102995613
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Entry
102995613 CDS
T06011
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X3
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcad03009
]
102995613 (IGHMBP2)
03012 Translation factors [BR:
pcad03012
]
102995613 (IGHMBP2)
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102995613 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
102995613 (IGHMBP2)
Ribosome biogenesis [BR:
pcad03009
]
Eukaryotic type
Other ribosome biogenesis factors
102995613 (IGHMBP2)
Translation factors [BR:
pcad03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102995613 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
DEAD
Viral_helicase1
ResIII
AAA_16
AAA_22
nSTAND3
AAA_25
SLFN-g3_helicase
IstB_IS21
UvrD-helicase
Flavi_DEAD
PhoH
SRP54
VWA_2
AAA
NPHP3_N
Zot
ATPase
UvrD_C_2
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
102995613
NCBI-ProteinID:
XP_007104550
Ensembl:
ENSPCTG00005012180
UniProt:
A0A2Y9EMJ1
LinkDB
All DBs
Position
18:complement(581931..606391)
Genome browser
AA seq
988 aa
AA seq
DB search
MASAAVESFVTKQLDLLELEREAEVEERRSWQENVSLKELQSRGVCLLKLQVSSQRTGLY
GRLLVTFEPRRCMSAAVLPSNSFTSGDIVGLYEEGSQLATGILTRITQKLVTVAFDESHD
FQLSLDREHSYRLLKLANDITYKRLKKTLITLKKYHSGPASSLTEVLFGGSDPSPASEIP
PLTFYNTTLDASQQEAVWFALSQKELAIVHGPPGTGKTTTVVEIILQAVKRGSKVLCCAP
SNVAVDNLVEQLARWKQRLLRLGHPARLLESVQRHSLDAVLARGDGARIVADIREDIDQV
LAKSKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLVAANVVLATNTGASPDGPLKL
LPDGHFDVVVIDECAQALEASCWIPLLKARKCVLAGDHRQLPPTTISHKAALAGLSLSLM
ERLAGGHGASSVRTLSVQYRMHQAIARWASEALYHGQLTTHPSVAGHLLRDLPGVAATEE
TGVALLLVDTAGCGLFELEGADELSKGNPGEVRLVSLHVQALVDAGVQAGDVAVIAPYNL
QVDLLRQSLTHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAENRRINVAVTR
ARRHVAVVCDSRTVNSHAFLKTLVDYFTEHGEVRTAFEYLDDIVPENYSREGAQGPGQAG
AKPRGSAATARGAPGSRRPTGAVLDRKKPGTAPLSSKAQPQPVLNGGGREGARSRGGAEQ
FRDVITEFVASEKTQLEFPASLDSQDRMWVHQIAEEYGLRHESAGEGKERFITVSKRVPL
APAAPEPPAGPGSKAPLCPEPPSPAQTEPPIGEQSSRGQPDLKALHLDRLQRAGSQQEQQ
AREGPRATGSGPRKLPEKKKKKGAEGPMAIDLPSGEDFDALVSAAIKADNTCGLAKCSAS
IVTLGQLCLHCGRRYCLSHHLPEIHGCGERARAHARQRISREGVLYAGSGTKDRSLDPAK
RAQLQRRLDKKLDQLTGQRRAKRKEKGK
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcggctgtggagagcttcgtgaccaagcagttggacctgctggagctcgag
agggaggcggaggtcgaggagcgcaggtcctggcaggaaaatgtctctctgaaagaactc
cagagccgaggcgtctgcttgctgaagctgcaggtatccagccagcggaccgggttgtac
ggacggttgctggtcacctttgagccccggagatgcatgtctgcagctgtgcttcccagt
aacagctttacttccggtgacatagtgggtctgtatgaggaaggcagccagctggccact
gggatcctgacccggatcacccagaaattggtcaccgtggcctttgacgagtcccatgat
ttccagttgagtttggaccgagagcattcctacaggctgttaaaacttgccaacgacatc
acttacaagcgactgaagaaaactctgattaccctaaagaagtatcattctggccccgcg
tcctcgctcacagaggtcctcttcggtggatcagaccccagccctgccagcgagataccc
cccctgaccttctacaacaccactctggacgcctcccagcaggaagcggtctggttcgcg
ctgtcccagaaggaactcgccatcgtccatgggcctcccggcaccgggaagaccaccacc
gtggttgaaatcatcctccaagctgtgaaacggggctcaaaggttctgtgctgcgccccc
tctaacgtcgccgtggacaacctggtcgagcagctggcccggtggaagcagaggctcctg
cgcctcgggcaccccgcacggctcctggagtctgtccagcggcattccctggacgcggtc
ttggcgcggggcgacggcgcccggatcgtggctgacatcagggaggacatcgaccaggtc
ttggcaaaaagtaaaaagacccaggataaaagagagaaaagtaattttcgaaatgaaatc
aagctgttaaggaaggagctgaaggagagggaggaagcagccatgctggagagcctggtg
gcggccaacgtggtcctcgcgacgaacacaggtgcctctccggacggccccctgaagctg
ctgccggacggccacttcgacgtggtggtcatcgatgagtgcgcccaggccctggaggcc
agctgctggatccccctgctgaaggccaggaagtgcgtcctggccggggaccacaggcag
ctgccccccaccaccatctctcacaaggccgcgctggcggggctgtcgctgagcctgatg
gagcgcctggcaggagggcacggcgccagctcggtgcggacgctgagcgtgcagtaccgc
atgcaccaggccatcgcgcgctgggcctcggaggccctgtaccacgggcagctcacgacc
cacccttccgtggccgggcacctcctgcgggacctgccgggagtggccgccacggaggag
acgggtgtggccctgctgctggtggacacggccggctgcgggctgtttgagctggagggc
gccgatgagctgtctaaggggaaccccggtgaggtgcgtctcgtcagtctgcacgtccag
gcgctggtggacgccggagtccaggctggcgacgtcgccgtcatcgcgccgtacaacctg
caggtggacctgctgagacagagcctcactcacaggcacccagagctcgagattaagtcg
gtcgacggcttccagggccgagagaaggaggctgtgatcctgtccttcgtcagatccaac
aggaaaggtgaggttggcttcctcgccgagaaccggcgcatcaatgtggccgtcacccgc
gcccggcggcacgtggccgtcgtctgcgattcccgcaccgtcaacagccacgccttcctg
aagaccctggtggactacttcacggaacacggggaggtgcgcacagcctttgagtatctc
gacgacatcgttcctgaaaactactcccgtgagggtgcccagggccctggccaggccggc
gcgaagccccgcggctctgccgcgacggccaggggggctcccggtagcaggcggcccacg
ggggccgtgctggatcggaagaagccgggcacggcgcctttgtcctccaaggcccagcct
cagcccgtcctcaacggaggcggccgggagggggccaggagcagaggcggcgcagagcaa
ttcagggatgtgataacggagtttgtggcgagtgagaagacacagctggagttccctgcc
tccctggattcgcaggacaggatgtgggtccatcagatcgcggaagagtacgggctgagg
cacgaaagtgccggagaggggaaggaacggttcatcaccgtgagcaagagggtcccactg
gcccctgcggctccagaacccccggcagggcctggcagcaaagcccctctgtgtccagag
ccccccagcccagcgcagacagagccccccatcggggagcagagcagccggggccagccg
gacctgaaggcgctgcacctggacagactgcagagggcggggagccagcaggagcagcag
gccagggaggggccgcgggccacgggctctgggccgcggaagttaccagaaaagaaaaag
aagaaaggagcagaaggacccatggccatagatctgccctccggggaggactttgacgcc
ctggtctcggccgccatcaaggctgacaacacctgcggcctcgccaagtgctcagccagc
atcgtaaccctgggccagctctgtctgcactgcggccgccggtactgcctcagccaccac
ctgcccgagatccacggctgcggggagagggctcgcgcccatgcgcggcagaggattagc
cgggaaggggtcctctacgccggcagcgggaccaaggacaggtccctggaccctgccaag
agggcccagctgcagaggcggctggacaagaagctggaccagctgaccggccagcggagg
gccaagaggaaggagaaggggaagtga
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